RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
SNX7-204ENST00000528824 ABCA10Q8WWZ4 1543 aa13.99□□□□□ -0.17
SNX7-204ENST00000528824 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
SNX7-204ENST00000528824 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
SNX7-204ENST00000528824 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
SNX7-204ENST00000528824 CEP170Q5SW79 1584 aa13.94□□□□□ -0.18
SNX7-204ENST00000528824 NUP160Q12769 1436 aa13.94□□□□□ -0.18
SNX7-204ENST00000528824 KCNA4P22459 653 aa13.93□□□□□ -0.18
SNX7-204ENST00000528824 WRNQ14191 1432 aaPredicted RBP eCLIP13.93□□□□□ -0.18
SNX7-204ENST00000528824 FHAD1B1AJZ9 1412 aa13.91□□□□□ -0.18
SNX7-204ENST00000528824 FAM69CQ0P6D2 419 aa13.91□□□□□ -0.18
SNX7-204ENST00000528824 ERCC6L2Q5T890 1561 aa13.89□□□□□ -0.19
SNX7-204ENST00000528824 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
SNX7-204ENST00000528824 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
SNX7-204ENST00000528824 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
SNX7-204ENST00000528824 SHROOM2Q13796 1616 aa13.87□□□□□ -0.19
SNX7-204ENST00000528824 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
SNX7-204ENST00000528824 PRG4Q92954 1404 aaPredicted RBP13.86□□□□□ -0.19
SNX7-204ENST00000528824 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
SNX7-204ENST00000528824 KIF13AQ9H1H9 1805 aa13.85□□□□□ -0.19
SNX7-204ENST00000528824 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
SNX7-204ENST00000528824 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.19
SNX7-204ENST00000528824 MAPKBP1O60336 1514 aa13.81□□□□□ -0.2
SNX7-204ENST00000528824 KDM6BO15054 1643 aa13.78□□□□□ -0.2
SNX7-204ENST00000528824 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
SNX7-204ENST00000528824 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
SNX7-204ENST00000528824 DIP2BQ9P265 1576 aa13.75□□□□□ -0.21
SNX7-204ENST00000528824 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
SNX7-204ENST00000528824 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
SNX7-204ENST00000528824 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
SNX7-204ENST00000528824 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
SNX7-204ENST00000528824 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
SNX7-204ENST00000528824 ADCY10Q96PN6 1610 aa13.66□□□□□ -0.22
SNX7-204ENST00000528824 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
SNX7-204ENST00000528824 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
SNX7-204ENST00000528824 PTPRGP23470 1445 aa13.64□□□□□ -0.23
SNX7-204ENST00000528824 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
SNX7-204ENST00000528824 PLB1Q6P1J6 1458 aa13.62□□□□□ -0.23
SNX7-204ENST00000528824 ADGRL1O94910 1474 aa13.6□□□□□ -0.23
SNX7-204ENST00000528824 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
SNX7-204ENST00000528824 ABCC2Q92887 1545 aa13.58□□□□□ -0.24
SNX7-204ENST00000528824 TEX14Q8IWB6 1497 aa13.58□□□□□ -0.24
SNX7-204ENST00000528824 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
SNX7-204ENST00000528824 GLI2P10070 1586 aa13.57□□□□□ -0.24
SNX7-204ENST00000528824 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
SNX7-204ENST00000528824 RNF39Q9H2S5 420 aa13.57□□□□□ -0.24
SNX7-204ENST00000528824 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
SNX7-204ENST00000528824 CUL7Q14999 1698 aa13.56□□□□□ -0.24
SNX7-204ENST00000528824 IGF1RP08069 1367 aa13.53□□□□□ -0.24
SNX7-204ENST00000528824 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.25
SNX7-204ENST00000528824 UACAQ9BZF9 1416 aa13.51□□□□□ -0.25
SNX7-204ENST00000528824 HECW2Q9P2P5 1572 aa13.51□□□□□ -0.25
SNX7-204ENST00000528824 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
SNX7-204ENST00000528824 FBXO41Q8TF61 875 aa13.47□□□□□ -0.25
SNX7-204ENST00000528824 EPRSP07814 1512 aaKnown RBP13.46□□□□□ -0.25
SNX7-204ENST00000528824 PPRC1Q5VV67 1664 aaKnown RBP13.45□□□□□ -0.26
SNX7-204ENST00000528824 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
SNX7-204ENST00000528824 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
SNX7-204ENST00000528824 KDM5BQ9UGL1 1544 aa13.43□□□□□ -0.26
SNX7-204ENST00000528824 MAP3K4Q9Y6R4 1608 aa13.43□□□□□ -0.26
SNX7-204ENST00000528824 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
SNX7-204ENST00000528824 WDR7Q9Y4E6 1490 aa13.39□□□□□ -0.27
SNX7-204ENST00000528824 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
SNX7-204ENST00000528824 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
SNX7-204ENST00000528824 DISP1Q96F81 1524 aa13.36□□□□□ -0.27
SNX7-204ENST00000528824 ZCCHC11Q5TAX3 1644 aaKnown RBP13.36□□□□□ -0.27
SNX7-204ENST00000528824 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
SNX7-204ENST00000528824 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
SNX7-204ENST00000528824 CFAP43Q8NDM7 1665 aa13.32□□□□□ -0.28
SNX7-204ENST00000528824 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
SNX7-204ENST00000528824 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
SNX7-204ENST00000528824 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
SNX7-204ENST00000528824 KIAA0556O60303 1618 aa13.3□□□□□ -0.28
SNX7-204ENST00000528824 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
SNX7-204ENST00000528824 ARAP3Q8WWN8 1544 aa13.26□□□□□ -0.29
SNX7-204ENST00000528824 PTPRMP28827 1452 aa13.25□□□□□ -0.29
SNX7-204ENST00000528824 ARID4BQ4LE39 1312 aaPredicted RBP13.24□□□□□ -0.29
SNX7-204ENST00000528824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNX7-204ENST00000528824 KIF21BO75037 1637 aa13.23□□□□□ -0.29
SNX7-204ENST00000528824 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
SNX7-204ENST00000528824 ABCA8O94911 1581 aa13.19□□□□□ -0.3
SNX7-204ENST00000528824 LMTK3Q96Q04 1460 aa13.19□□□□□ -0.3
SNX7-204ENST00000528824 PCF11O94913 1555 aaKnown RBP13.18□□□□□ -0.3
SNX7-204ENST00000528824 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
SNX7-204ENST00000528824 NEO1Q92859 1461 aa13.17□□□□□ -0.3
SNX7-204ENST00000528824 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
SNX7-204ENST00000528824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
SNX7-204ENST00000528824 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
SNX7-204ENST00000528824 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.3
SNX7-204ENST00000528824 RAPGEF3O95398 923 aa13.15□□□□□ -0.3
SNX7-204ENST00000528824 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
SNX7-204ENST00000528824 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
SNX7-204ENST00000528824 BCORL1Q5H9F3 1711 aa13.12□□□□□ -0.31
SNX7-204ENST00000528824 ABCA9Q8IUA7 1624 aa13.12□□□□□ -0.31
SNX7-204ENST00000528824 ATP10BO94823 1461 aa13.11□□□□□ -0.31
SNX7-204ENST00000528824 ARID3CA6NKF2 412 aa13.1□□□□□ -0.31
SNX7-204ENST00000528824 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
SNX7-204ENST00000528824 FANCAO15360 1455 aa13.08□□□□□ -0.32
SNX7-204ENST00000528824 DENND4BO75064 1496 aaPredicted RBP13.08□□□□□ -0.32
SNX7-204ENST00000528824 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms