RNA–Protein interactions for RNA: ENST00000528380.1

KDM2A-209, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-209ENST00000528380 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
KDM2A-209ENST00000528380 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
KDM2A-209ENST00000528380 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
KDM2A-209ENST00000528380 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
KDM2A-209ENST00000528380 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
KDM2A-209ENST00000528380 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
KDM2A-209ENST00000528380 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
KDM2A-209ENST00000528380 UNC13AQ9UPW8 1703 aa13.71□□□□□ -0.21
KDM2A-209ENST00000528380 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
KDM2A-209ENST00000528380 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
KDM2A-209ENST00000528380 SLC39A7Q92504 469 aa13.67□□□□□ -0.22
KDM2A-209ENST00000528380 C7P10643 843 aa13.66□□□□□ -0.22
KDM2A-209ENST00000528380 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
KDM2A-209ENST00000528380 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
KDM2A-209ENST00000528380 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
KDM2A-209ENST00000528380 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
KDM2A-209ENST00000528380 MS4A3Q96HJ5 214 aa13.62□□□□□ -0.23
KDM2A-209ENST00000528380 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
KDM2A-209ENST00000528380 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
KDM2A-209ENST00000528380 FAM163AQ96GL9 167 aaPredicted RBP13.58□□□□□ -0.24
KDM2A-209ENST00000528380 PROM2Q8N271 834 aa13.57□□□□□ -0.24
KDM2A-209ENST00000528380 LCE2DQ5TA82 110 aaPredicted RBP13.54□□□□□ -0.24
KDM2A-209ENST00000528380 SCUBE2Q9NQ36 999 aa13.54□□□□□ -0.24
KDM2A-209ENST00000528380 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
KDM2A-209ENST00000528380 MIER1Q8N108 512 aa13.48□□□□□ -0.25
KDM2A-209ENST00000528380 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
KDM2A-209ENST00000528380 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
KDM2A-209ENST00000528380 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
KDM2A-209ENST00000528380 FKBP8Q14318 412 aa13.43□□□□□ -0.26
KDM2A-209ENST00000528380 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
KDM2A-209ENST00000528380 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
KDM2A-209ENST00000528380 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
KDM2A-209ENST00000528380 KIF12Q96FN5 646 aa13.34□□□□□ -0.27
KDM2A-209ENST00000528380 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
KDM2A-209ENST00000528380 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
KDM2A-209ENST00000528380 CC2D2AQ9P2K1 1620 aa13.31□□□□□ -0.28
KDM2A-209ENST00000528380 CDAN1Q8IWY9 1227 aa13.31□□□□□ -0.28
KDM2A-209ENST00000528380 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
KDM2A-209ENST00000528380 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
KDM2A-209ENST00000528380 SEC24BO95487 1268 aa13.27□□□□□ -0.29
KDM2A-209ENST00000528380 TIE1P35590 1138 aa13.27□□□□□ -0.29
KDM2A-209ENST00000528380 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
KDM2A-209ENST00000528380 MAP3K13O43283 966 aa13.23□□□□□ -0.29
KDM2A-209ENST00000528380 COLQQ9Y215 455 aaPredicted RBP13.23□□□□□ -0.29
KDM2A-209ENST00000528380 TTLL13PA6NNM8 815 aa13.18□□□□□ -0.3
KDM2A-209ENST00000528380 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
KDM2A-209ENST00000528380 ST18O60284 1047 aa13.12□□□□□ -0.31
KDM2A-209ENST00000528380 IER5LQ5T953 404 aa13.12□□□□□ -0.31
KDM2A-209ENST00000528380 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
KDM2A-209ENST00000528380 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
KDM2A-209ENST00000528380 NUBP1P53384 320 aa13.1□□□□□ -0.31
KDM2A-209ENST00000528380 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
KDM2A-209ENST00000528380 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
KDM2A-209ENST00000528380 PCDHB13Q9Y5F0 798 aa13.05□□□□□ -0.32
KDM2A-209ENST00000528380 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
KDM2A-209ENST00000528380 MMRN1Q13201 1228 aa13.02□□□□□ -0.33
KDM2A-209ENST00000528380 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
KDM2A-209ENST00000528380 KLHL34Q8N239 644 aa13□□□□□ -0.33
KDM2A-209ENST00000528380 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
KDM2A-209ENST00000528380 PLCG2P16885 1265 aa12.97□□□□□ -0.33
KDM2A-209ENST00000528380 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
KDM2A-209ENST00000528380 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
KDM2A-209ENST00000528380 TMEM121BQ9BXQ6 578 aaPredicted RBP12.94□□□□□ -0.34
KDM2A-209ENST00000528380 PYGBP11216 843 aa12.93□□□□□ -0.34
KDM2A-209ENST00000528380 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
KDM2A-209ENST00000528380 TMEM106CQ9BVX2 250 aa12.93□□□□□ -0.34
KDM2A-209ENST00000528380 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
KDM2A-209ENST00000528380 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
KDM2A-209ENST00000528380 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
KDM2A-209ENST00000528380 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.35
KDM2A-209ENST00000528380 SNPHO15079 494 aa12.89□□□□□ -0.35
KDM2A-209ENST00000528380 HMGXB3Q12766 1538 aa12.88□□□□□ -0.35
KDM2A-209ENST00000528380 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
KDM2A-209ENST00000528380 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
KDM2A-209ENST00000528380 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
KDM2A-209ENST00000528380 OCEL1Q9H607 264 aa12.82□□□□□ -0.36
KDM2A-209ENST00000528380 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
KDM2A-209ENST00000528380 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
KDM2A-209ENST00000528380 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
KDM2A-209ENST00000528380 GSE1Q14687 1217 aa12.78□□□□□ -0.36
KDM2A-209ENST00000528380 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
KDM2A-209ENST00000528380 CUX2O14529 1486 aa12.74□□□□□ -0.37
KDM2A-209ENST00000528380 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
KDM2A-209ENST00000528380 EMP3P54852 163 aa12.71□□□□□ -0.37
KDM2A-209ENST00000528380 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
KDM2A-209ENST00000528380 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
KDM2A-209ENST00000528380 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
KDM2A-209ENST00000528380 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
KDM2A-209ENST00000528380 LAMC3Q9Y6N6 1575 aa12.67□□□□□ -0.38
KDM2A-209ENST00000528380 NESP48681 1621 aa12.64□□□□□ -0.39
KDM2A-209ENST00000528380 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
KDM2A-209ENST00000528380 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
KDM2A-209ENST00000528380 KRTAP3-3Q9BYR6 98 aa12.63□□□□□ -0.39
KDM2A-209ENST00000528380 KRTAP3-2Q9BYR7 98 aa12.63□□□□□ -0.39
KDM2A-209ENST00000528380 CHRM1P11229 460 aaPredicted RBP12.62□□□□□ -0.39
KDM2A-209ENST00000528380 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
KDM2A-209ENST00000528380 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
KDM2A-209ENST00000528380 PSEN1P49768 467 aa12.6□□□□□ -0.39
KDM2A-209ENST00000528380 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
KDM2A-209ENST00000528380 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms