RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
LINC01001-202ENST00000527683 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
LINC01001-202ENST00000527683 VASPP50552 380 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-202ENST00000527683 PLCD3Q8N3E9 789 aa11.1□□□□□ -0.63
LINC01001-202ENST00000527683 NCAPD3P42695 1498 aa11.08□□□□□ -0.64
LINC01001-202ENST00000527683 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
LINC01001-202ENST00000527683 NUBP1P53384 320 aa11.05□□□□□ -0.64
LINC01001-202ENST00000527683 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01001-202ENST00000527683 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
LINC01001-202ENST00000527683 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
LINC01001-202ENST00000527683 GABBR2O75899 941 aa11.03□□□□□ -0.64
LINC01001-202ENST00000527683 CUX2O14529 1486 aa11.01□□□□□ -0.65
LINC01001-202ENST00000527683 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
LINC01001-202ENST00000527683 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
LINC01001-202ENST00000527683 PHF12Q96QT6 1004 aa10.99□□□□□ -0.65
LINC01001-202ENST00000527683 ERCC6Q03468 1493 aa10.99□□□□□ -0.65
LINC01001-202ENST00000527683 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
LINC01001-202ENST00000527683 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
LINC01001-202ENST00000527683 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
LINC01001-202ENST00000527683 GALR2O43603 387 aaPredicted RBP10.92□□□□□ -0.66
LINC01001-202ENST00000527683 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
LINC01001-202ENST00000527683 NESP48681 1621 aa10.91□□□□□ -0.66
LINC01001-202ENST00000527683 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
LINC01001-202ENST00000527683 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
LINC01001-202ENST00000527683 SMARCA2P51531 1590 aa10.87□□□□□ -0.67
LINC01001-202ENST00000527683 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
LINC01001-202ENST00000527683 PAK3O75914 559 aaPredicted RBP10.86□□□□□ -0.67
LINC01001-202ENST00000527683 HMGXB3Q12766 1538 aa10.84□□□□□ -0.67
LINC01001-202ENST00000527683 MS4A3Q96HJ5 214 aa10.84□□□□□ -0.67
LINC01001-202ENST00000527683 BAZ1BQ9UIG0 1483 aaKnown RBP10.83□□□□□ -0.68
LINC01001-202ENST00000527683 TRPC6Q9Y210 931 aa10.83□□□□□ -0.68
LINC01001-202ENST00000527683 MAP3K13O43283 966 aa10.82□□□□□ -0.68
LINC01001-202ENST00000527683 SMARCA4P51532 1647 aa10.82□□□□□ -0.68
LINC01001-202ENST00000527683 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
LINC01001-202ENST00000527683 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
LINC01001-202ENST00000527683 BAZ1AQ9NRL2 1556 aaPredicted RBP10.78□□□□□ -0.68
LINC01001-202ENST00000527683 PDS5BQ9NTI5 1447 aa10.78□□□□□ -0.68
LINC01001-202ENST00000527683 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
LINC01001-202ENST00000527683 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.69
LINC01001-202ENST00000527683 CLCN6P51797 869 aa10.76□□□□□ -0.69
LINC01001-202ENST00000527683 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
LINC01001-202ENST00000527683 MROH2BQ7Z745 1585 aa10.76□□□□□ -0.69
LINC01001-202ENST00000527683 PYGBP11216 843 aa10.75□□□□□ -0.69
LINC01001-202ENST00000527683 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
LINC01001-202ENST00000527683 PEG3Q9GZU2 1588 aa10.74□□□□□ -0.69
LINC01001-202ENST00000527683 IFNL1Q8IU54 200 aa10.72□□□□□ -0.69
LINC01001-202ENST00000527683 LAMC3Q9Y6N6 1575 aa10.71□□□□□ -0.69
LINC01001-202ENST00000527683 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
LINC01001-202ENST00000527683 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
LINC01001-202ENST00000527683 GSE1Q14687 1217 aa10.68□□□□□ -0.7
LINC01001-202ENST00000527683 ATMINO43313 823 aaPredicted RBP10.67□□□□□ -0.7
LINC01001-202ENST00000527683 DCBLD2Q96PD2 775 aa10.67□□□□□ -0.7
LINC01001-202ENST00000527683 BMP2KQ9NSY1 1161 aaPredicted RBP10.67□□□□□ -0.7
LINC01001-202ENST00000527683 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
LINC01001-202ENST00000527683 PCDHB8Q9UN66 801 aa10.67□□□□□ -0.7
LINC01001-202ENST00000527683 ASTLQ6HA08 431 aaPredicted RBP10.66□□□□□ -0.7
LINC01001-202ENST00000527683 CHRM1P11229 460 aaPredicted RBP10.65□□□□□ -0.7
LINC01001-202ENST00000527683 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
LINC01001-202ENST00000527683 SGIP1Q9BQI5 828 aa10.65□□□□□ -0.7
LINC01001-202ENST00000527683 MRC2Q9UBG0 1479 aa10.64□□□□□ -0.71
LINC01001-202ENST00000527683 TTLL13PA6NNM8 815 aa10.61□□□□□ -0.71
LINC01001-202ENST00000527683 TIE1P35590 1138 aa10.59□□□□□ -0.71
LINC01001-202ENST00000527683 PKD2Q13563 968 aa10.59□□□□□ -0.71
LINC01001-202ENST00000527683 RNF25Q96BH1 459 aaPredicted RBP10.59□□□□□ -0.71
LINC01001-202ENST00000527683 POTEB2H3BUK9 544 aa10.58□□□□□ -0.72
LINC01001-202ENST00000527683 WDR62O43379 1518 aa10.58□□□□□ -0.72
LINC01001-202ENST00000527683 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
LINC01001-202ENST00000527683 KIF21AQ7Z4S6 1674 aa10.57□□□□□ -0.72
LINC01001-202ENST00000527683 CFTRP13569 1480 aa10.56□□□□□ -0.72
LINC01001-202ENST00000527683 FANCD2Q9BXW9 1451 aa10.56□□□□□ -0.72
LINC01001-202ENST00000527683 RSF1Q96T23 1441 aaPredicted RBP10.55□□□□□ -0.72
LINC01001-202ENST00000527683 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
LINC01001-202ENST00000527683 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
LINC01001-202ENST00000527683 WIZO95785 1651 aa10.53□□□□□ -0.72
LINC01001-202ENST00000527683 TRIM35Q9UPQ4 493 aa10.52□□□□□ -0.73
LINC01001-202ENST00000527683 POTEJP0CG39 1038 aa10.51□□□□□ -0.73
LINC01001-202ENST00000527683 LHX8Q68G74 356 aa10.49□□□□□ -0.73
LINC01001-202ENST00000527683 ZNF467Q7Z7K2 595 aaPredicted RBP10.49□□□□□ -0.73
LINC01001-202ENST00000527683 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
LINC01001-202ENST00000527683 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
LINC01001-202ENST00000527683 URB2Q14146 1524 aaKnown RBP10.48□□□□□ -0.73
LINC01001-202ENST00000527683 PSEN1P49768 467 aa10.47□□□□□ -0.73
LINC01001-202ENST00000527683 SLC39A7Q92504 469 aa10.46□□□□□ -0.73
LINC01001-202ENST00000527683 C7P10643 843 aa10.45□□□□□ -0.74
LINC01001-202ENST00000527683 RGL2O15211 777 aa10.44□□□□□ -0.74
LINC01001-202ENST00000527683 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
LINC01001-202ENST00000527683 CYB5RLQ6IPT4 315 aa10.43□□□□□ -0.74
LINC01001-202ENST00000527683 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
LINC01001-202ENST00000527683 TOP2AP11388 1531 aaKnown RBP10.4□□□□□ -0.74
LINC01001-202ENST00000527683 ZNF608Q9ULD9 1512 aaPredicted RBP10.4□□□□□ -0.74
LINC01001-202ENST00000527683 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
LINC01001-202ENST00000527683 IRX5P78411 483 aaPredicted RBP10.4□□□□□ -0.74
LINC01001-202ENST00000527683 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.74
LINC01001-202ENST00000527683 OTUD5Q96G74 571 aa10.39□□□□□ -0.75
LINC01001-202ENST00000527683 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
LINC01001-202ENST00000527683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.38□□□□□ -0.75
LINC01001-202ENST00000527683 ZFP91Q96JP5 570 aaPredicted RBP10.38□□□□□ -0.75
LINC01001-202ENST00000527683 IER5LQ5T953 404 aa10.37□□□□□ -0.75
LINC01001-202ENST00000527683 CABP2Q9NPB3 220 aa10.35□□□□□ -0.75
LINC01001-202ENST00000527683 ILDR1Q86SU0 546 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms