RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 ACIN1Q9UKV3 1341 aaKnown RBP28.28■■■□□ 2.12
VPS51-204ENST00000527646 CCER1Q8TC90 406 aaPredicted RBP28.27■■■□□ 2.12
VPS51-204ENST00000527646 EFCAB5A4FU69 1503 aa28.26■■■□□ 2.11
VPS51-204ENST00000527646 IFT140Q96RY7 1462 aa28.25■■■□□ 2.11
VPS51-204ENST00000527646 PBRM1Q86U86 1689 aa28.24■■■□□ 2.11
VPS51-204ENST00000527646 FHAD1B1AJZ9 1412 aa28.24■■■□□ 2.11
VPS51-204ENST00000527646 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.16e-7■■■□□ 18.6
VPS51-204ENST00000527646 KANK4Q5T7N3 995 aaPredicted RBP28.18■■■□□ 2.1
VPS51-204ENST00000527646 GRIN2BQ13224 1484 aa28.16■■■□□ 2.1
VPS51-204ENST00000527646 MAP3K1Q13233 1512 aa28.16■■■□□ 2.1
VPS51-204ENST00000527646 P3H3Q8IVL6 736 aa28.14■■■□□ 2.1
VPS51-204ENST00000527646 FHOD3Q2V2M9 1422 aa28.12■■■□□ 2.09
VPS51-204ENST00000527646 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
VPS51-204ENST00000527646 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
VPS51-204ENST00000527646 TIAM1Q13009 1591 aa28.1■■■□□ 2.09
VPS51-204ENST00000527646 CENPBP07199 599 aaPredicted RBP28.1■■■□□ 2.09
VPS51-204ENST00000527646 NEUROD1Q13562 356 aa28.09■■■□□ 2.09
VPS51-204ENST00000527646 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.09
VPS51-204ENST00000527646 HNRNPUL2Q1KMD3 747 aaKnown RBP28.07■■■□□ 2.08
VPS51-204ENST00000527646 PCF11O94913 1555 aaKnown RBP28.07■■■□□ 2.08
VPS51-204ENST00000527646 FMN1Q68DA7 1419 aa28.05■■■□□ 2.08
VPS51-204ENST00000527646 FYCO1Q9BQS8 1478 aa28.04■■■□□ 2.08
VPS51-204ENST00000527646 MYT1Q01538 1121 aa28.04■■■□□ 2.08
VPS51-204ENST00000527646 DIEXFQ68CQ4 756 aaKnown RBP28.04■■■□□ 2.08
VPS51-204ENST00000527646 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
VPS51-204ENST00000527646 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.07
VPS51-204ENST00000527646 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
VPS51-204ENST00000527646 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
VPS51-204ENST00000527646 RRBP1Q9P2E9 1410 aaKnown RBP27.99■■■□□ 2.07
VPS51-204ENST00000527646 LRRC9Q6ZRR7 1453 aa27.98■■■□□ 2.07
VPS51-204ENST00000527646 ATP1B4Q9UN42 357 aaPredicted RBP27.98■■■□□ 2.07
VPS51-204ENST00000527646 IQGAP2Q13576 1575 aa27.94■■■□□ 2.06
VPS51-204ENST00000527646 SNAPC4Q5SXM2 1469 aa27.92■■■□□ 2.06
VPS51-204ENST00000527646 GTF3C3Q9Y5Q9 886 aa27.91■■■□□ 2.06
VPS51-204ENST00000527646 CCNB3Q8WWL7 1395 aa27.91■■■□□ 2.06
VPS51-204ENST00000527646 MAGI1Q96QZ7 1491 aaPredicted RBP27.86■■■□□ 2.05
VPS51-204ENST00000527646 GRIN2AQ12879 1464 aa27.83■■■□□ 2.04
VPS51-204ENST00000527646 KIAA0586Q9BVV6 1533 aa27.79■■■□□ 2.04
VPS51-204ENST00000527646 UGGT2Q9NYU1 1516 aa27.78■■■□□ 2.04
VPS51-204ENST00000527646 SYNJ2O15056 1496 aa27.76■■■□□ 2.03
VPS51-204ENST00000527646 PHLDB1Q86UU1 1377 aa27.76■■■□□ 2.03
VPS51-204ENST00000527646 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
VPS51-204ENST00000527646 MTUS2Q5JR59 1369 aa27.71■■■□□ 2.03
VPS51-204ENST00000527646 ZNF316A6NFI3 1004 aaPredicted RBP27.69■■■□□ 2.02
VPS51-204ENST00000527646 LRRIQ1Q96JM4 1722 aa27.69■■■□□ 2.02
VPS51-204ENST00000527646 CCDC18Q5T9S5 1454 aa27.69■■■□□ 2.02
VPS51-204ENST00000527646 HECW1Q76N89 1606 aa27.68■■■□□ 2.02
VPS51-204ENST00000527646 ITGAEP38570 1179 aa27.65■■■□□ 2.02
VPS51-204ENST00000527646 FBLN2P98095 1184 aa27.64■■■□□ 2.02
VPS51-204ENST00000527646 KIAA0556O60303 1618 aa27.63■■■□□ 2.01
VPS51-204ENST00000527646 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
VPS51-204ENST00000527646 FAM50AQ14320 339 aaKnown RBP27.61■■■□□ 2.01
VPS51-204ENST00000527646 EHBP1L1Q8N3D4 1523 aa27.61■■■□□ 2.01
VPS51-204ENST00000527646 DISP1Q96F81 1524 aa27.61■■■□□ 2.01
VPS51-204ENST00000527646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.58■■■□□ 2.01
VPS51-204ENST00000527646 SUPT6HQ7KZ85 1726 aaKnown RBP27.57■■■□□ 2
VPS51-204ENST00000527646 CLSPNQ9HAW4 1339 aa27.56■■■□□ 2
VPS51-204ENST00000527646 NUP160Q12769 1436 aa27.56■■■□□ 2
VPS51-204ENST00000527646 EPRSP07814 1512 aaKnown RBP27.55■■■□□ 2
VPS51-204ENST00000527646 NCOA2Q15596 1464 aa27.53■■■□□ 2
VPS51-204ENST00000527646 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
VPS51-204ENST00000527646 DHX57Q6P158 1386 aaKnown RBP27.53■■■□□ 2
VPS51-204ENST00000527646 MYOM3Q5VTT5 1437 aa27.48■■□□□ 1.99
VPS51-204ENST00000527646 CARMIL2Q6F5E8 1435 aa27.48■■□□□ 1.99
VPS51-204ENST00000527646 MAGI3Q5TCQ9 1506 aa27.46■■□□□ 1.99
VPS51-204ENST00000527646 CDK13Q14004 1512 aaKnown RBP27.45■■□□□ 1.99
VPS51-204ENST00000527646 SETD5Q9C0A6 1442 aa27.45■■□□□ 1.99
VPS51-204ENST00000527646 RAB3GAP2Q9H2M9 1393 aa27.45■■□□□ 1.99
VPS51-204ENST00000527646 JPH4Q96JJ6 628 aa27.44■■□□□ 1.98
VPS51-204ENST00000527646 RAPGEF6Q8TEU7 1601 aa27.44■■□□□ 1.98
VPS51-204ENST00000527646 ARHGEF11O15085 1522 aa27.43■■□□□ 1.98
VPS51-204ENST00000527646 NUP153P49790 1475 aaKnown RBP27.38■■□□□ 1.97
VPS51-204ENST00000527646 ARID3CA6NKF2 412 aa27.37■■□□□ 1.97
VPS51-204ENST00000527646 CDK11AQ9UQ88 783 aaPredicted RBP27.34■■□□□ 1.97
VPS51-204ENST00000527646 PTPN23Q9H3S7 1636 aa27.33■■□□□ 1.97
VPS51-204ENST00000527646 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
VPS51-204ENST00000527646 CHD1O14646 1710 aa27.29■■□□□ 1.96
VPS51-204ENST00000527646 PLB1Q6P1J6 1458 aa27.29■■□□□ 1.96
VPS51-204ENST00000527646 MIER1Q8N108 512 aa27.28■■□□□ 1.96
VPS51-204ENST00000527646 MIA2Q96PC5 1412 aa27.27■■□□□ 1.96
VPS51-204ENST00000527646 TCOF1Q13428 1488 aaKnown RBP27.26■■□□□ 1.95
VPS51-204ENST00000527646 HFM1A2PYH4 1435 aa27.21■■□□□ 1.95
VPS51-204ENST00000527646 PTPRKQ15262 1439 aa27.21■■□□□ 1.95
VPS51-204ENST00000527646 PRG4Q92954 1404 aaPredicted RBP27.21■■□□□ 1.95
VPS51-204ENST00000527646 TROQ12816 1431 aaPredicted RBP27.19■■□□□ 1.94
VPS51-204ENST00000527646 ABCA8O94911 1581 aa27.18■■□□□ 1.94
VPS51-204ENST00000527646 MAPKBP1O60336 1514 aa27.17■■□□□ 1.94
VPS51-204ENST00000527646 PTPRGP23470 1445 aa27.12■■□□□ 1.93
VPS51-204ENST00000527646 NAIPQ13075 1403 aa27.12■■□□□ 1.93
VPS51-204ENST00000527646 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
VPS51-204ENST00000527646 ADCY10Q96PN6 1610 aa27.09■■□□□ 1.93
VPS51-204ENST00000527646 AKNAQ7Z591 1439 aa27.07■■□□□ 1.92
VPS51-204ENST00000527646 ITSN2Q9NZM3 1697 aa27.06■■□□□ 1.92
VPS51-204ENST00000527646 PLEKHD1A6NEE1 506 aa27.05■■□□□ 1.92
VPS51-204ENST00000527646 UACAQ9BZF9 1416 aa27.05■■□□□ 1.92
VPS51-204ENST00000527646 ATP10BO94823 1461 aa27.04■■□□□ 1.92
VPS51-204ENST00000527646 CHIC2Q9UKJ5 165 aa27.02■■□□□ 1.92
VPS51-204ENST00000527646 GCC2Q8IWJ2 1684 aa27.02■■□□□ 1.92
VPS51-204ENST00000527646 KIF14Q15058 1648 aa27.02■■□□□ 1.92
VPS51-204ENST00000527646 RRP7BPQ9NSQ0 103 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms