RNA–Protein interactions for RNA: ENST00000527308.5

PDZD3-207, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-207ENST00000527308 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
PDZD3-207ENST00000527308 MAPKBP1O60336 1514 aa18.24■□□□□ 0.51
PDZD3-207ENST00000527308 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
PDZD3-207ENST00000527308 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
PDZD3-207ENST00000527308 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
PDZD3-207ENST00000527308 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
PDZD3-207ENST00000527308 DIP2BQ9P265 1576 aa18.2■□□□□ 0.5
PDZD3-207ENST00000527308 ADCY10Q96PN6 1610 aa18.16■□□□□ 0.5
PDZD3-207ENST00000527308 KDM6BO15054 1643 aa18.13■□□□□ 0.49
PDZD3-207ENST00000527308 KIAA0586Q9BVV6 1533 aa18.12■□□□□ 0.49
PDZD3-207ENST00000527308 KDM4FA0A1W2PPD8 638 aa18.08■□□□□ 0.48
PDZD3-207ENST00000527308 TSPOAP1O95153 1857 aa18.07■□□□□ 0.48
PDZD3-207ENST00000527308 CUL7Q14999 1698 aa18.06■□□□□ 0.48
PDZD3-207ENST00000527308 IGF1RP08069 1367 aa18.04■□□□□ 0.48
PDZD3-207ENST00000527308 KIF27Q86VH2 1401 aa18■□□□□ 0.47
PDZD3-207ENST00000527308 PTPRGP23470 1445 aa17.99■□□□□ 0.47
PDZD3-207ENST00000527308 GLI2P10070 1586 aa17.96■□□□□ 0.47
PDZD3-207ENST00000527308 ABCC2Q92887 1545 aa17.96■□□□□ 0.47
PDZD3-207ENST00000527308 CARMIL2Q6F5E8 1435 aa17.95■□□□□ 0.46
PDZD3-207ENST00000527308 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
PDZD3-207ENST00000527308 PLB1Q6P1J6 1458 aa17.94■□□□□ 0.46
PDZD3-207ENST00000527308 PPRC1Q5VV67 1664 aaKnown RBP17.93■□□□□ 0.46
PDZD3-207ENST00000527308 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
PDZD3-207ENST00000527308 UHRF1BP1LA0JNW5 1464 aa17.91■□□□□ 0.46
PDZD3-207ENST00000527308 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
PDZD3-207ENST00000527308 IQGAP2Q13576 1575 aa17.88■□□□□ 0.45
PDZD3-207ENST00000527308 ILDR1Q86SU0 546 aaPredicted RBP17.87■□□□□ 0.45
PDZD3-207ENST00000527308 UACAQ9BZF9 1416 aa17.86■□□□□ 0.45
PDZD3-207ENST00000527308 ADGRL1O94910 1474 aa17.85■□□□□ 0.45
PDZD3-207ENST00000527308 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
PDZD3-207ENST00000527308 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
PDZD3-207ENST00000527308 KDM5BQ9UGL1 1544 aa17.82■□□□□ 0.44
PDZD3-207ENST00000527308 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
PDZD3-207ENST00000527308 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
PDZD3-207ENST00000527308 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
PDZD3-207ENST00000527308 COL17A1Q9UMD9 1497 aaPredicted RBP17.81■□□□□ 0.44
PDZD3-207ENST00000527308 ZCCHC11Q5TAX3 1644 aaKnown RBP17.77■□□□□ 0.44
PDZD3-207ENST00000527308 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.43
PDZD3-207ENST00000527308 HECW2Q9P2P5 1572 aa17.73■□□□□ 0.43
PDZD3-207ENST00000527308 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
PDZD3-207ENST00000527308 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
PDZD3-207ENST00000527308 WDR7Q9Y4E6 1490 aa17.69■□□□□ 0.42
PDZD3-207ENST00000527308 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
PDZD3-207ENST00000527308 MAGI3Q5TCQ9 1506 aa17.66■□□□□ 0.42
PDZD3-207ENST00000527308 CD109Q6YHK3 1445 aa17.63■□□□□ 0.41
PDZD3-207ENST00000527308 CTTNBP2Q8WZ74 1663 aa17.62■□□□□ 0.41
PDZD3-207ENST00000527308 GOLGA3Q08378 1498 aa17.6■□□□□ 0.41
PDZD3-207ENST00000527308 ABCA8O94911 1581 aa17.59■□□□□ 0.41
PDZD3-207ENST00000527308 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
PDZD3-207ENST00000527308 ARAP3Q8WWN8 1544 aa17.53■□□□□ 0.4
PDZD3-207ENST00000527308 KIF21BO75037 1637 aa17.53■□□□□ 0.4
PDZD3-207ENST00000527308 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
PDZD3-207ENST00000527308 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
PDZD3-207ENST00000527308 FAM9AQ8IZU1 332 aaPredicted RBP17.46■□□□□ 0.39
PDZD3-207ENST00000527308 ADAMTSL3P82987 1691 aa17.45■□□□□ 0.38
PDZD3-207ENST00000527308 ABCA9Q8IUA7 1624 aa17.45■□□□□ 0.38
PDZD3-207ENST00000527308 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
PDZD3-207ENST00000527308 ATP10BO94823 1461 aa17.44■□□□□ 0.38
PDZD3-207ENST00000527308 PTPRMP28827 1452 aa17.43■□□□□ 0.38
PDZD3-207ENST00000527308 NEO1Q92859 1461 aa17.39■□□□□ 0.37
PDZD3-207ENST00000527308 BCORL1Q5H9F3 1711 aa17.38■□□□□ 0.37
PDZD3-207ENST00000527308 RAPGEF3O95398 923 aa17.35■□□□□ 0.37
PDZD3-207ENST00000527308 RAPGEF6Q8TEU7 1601 aa17.33■□□□□ 0.37
PDZD3-207ENST00000527308 PCF11O94913 1555 aaKnown RBP17.33■□□□□ 0.37
PDZD3-207ENST00000527308 SAMD9Q5K651 1589 aa17.33■□□□□ 0.37
PDZD3-207ENST00000527308 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
PDZD3-207ENST00000527308 FRMPD1Q5SYB0 1578 aa17.32■□□□□ 0.36
PDZD3-207ENST00000527308 ARID3CA6NKF2 412 aa17.32■□□□□ 0.36
PDZD3-207ENST00000527308 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
PDZD3-207ENST00000527308 LMTK3Q96Q04 1460 aa17.3■□□□□ 0.36
PDZD3-207ENST00000527308 ARID4BQ4LE39 1312 aaPredicted RBP17.27■□□□□ 0.36
PDZD3-207ENST00000527308 RICTORQ6R327 1708 aa17.27■□□□□ 0.35
PDZD3-207ENST00000527308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
PDZD3-207ENST00000527308 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
PDZD3-207ENST00000527308 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
PDZD3-207ENST00000527308 RIMS1Q86UR5 1692 aaKnown RBP17.25■□□□□ 0.35
PDZD3-207ENST00000527308 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
PDZD3-207ENST00000527308 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
PDZD3-207ENST00000527308 CFAP74Q9C0B2 1584 aa17.24■□□□□ 0.35
PDZD3-207ENST00000527308 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
PDZD3-207ENST00000527308 FHOD3Q2V2M9 1422 aa17.22■□□□□ 0.35
PDZD3-207ENST00000527308 AKNAQ7Z591 1439 aa17.21■□□□□ 0.35
PDZD3-207ENST00000527308 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
PDZD3-207ENST00000527308 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
PDZD3-207ENST00000527308 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.34
PDZD3-207ENST00000527308 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
PDZD3-207ENST00000527308 FANCAO15360 1455 aa17.19■□□□□ 0.34
PDZD3-207ENST00000527308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDZD3-207ENST00000527308 MAGI2Q86UL8 1455 aa17.18■□□□□ 0.34
PDZD3-207ENST00000527308 EFCAB5A4FU69 1503 aa17.17■□□□□ 0.34
PDZD3-207ENST00000527308 ZFYVE16Q7Z3T8 1539 aa17.15■□□□□ 0.34
PDZD3-207ENST00000527308 SIGLEC1Q9BZZ2 1709 aa17.14■□□□□ 0.33
PDZD3-207ENST00000527308 HSPA2P54652 639 aa17.14■□□□□ 0.33
PDZD3-207ENST00000527308 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
PDZD3-207ENST00000527308 FER1L4A9Z1Z3 1794 aa17.12■□□□□ 0.33
PDZD3-207ENST00000527308 YEATS2Q9ULM3 1422 aa17.12■□□□□ 0.33
PDZD3-207ENST00000527308 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
PDZD3-207ENST00000527308 EEA1Q15075 1411 aa17.11■□□□□ 0.33
PDZD3-207ENST00000527308 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
PDZD3-207ENST00000527308 PLCH2O75038 1416 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms