RNA–Protein interactions for RNA: ENST00000526995.5

TRAF6-202, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 4,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-202ENST00000526995 CFDP1Q9UEE9 299 aaPredicted RBP18.29■□□□□ 0.52
TRAF6-202ENST00000526995 KDM2AQ9Y2K7 1162 aa18.28■□□□□ 0.52
TRAF6-202ENST00000526995 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
TRAF6-202ENST00000526995 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.52
TRAF6-202ENST00000526995 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
TRAF6-202ENST00000526995 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
TRAF6-202ENST00000526995 WIZO95785 1651 aa18.26■□□□□ 0.51
TRAF6-202ENST00000526995 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
TRAF6-202ENST00000526995 MIER1Q8N108 512 aa18.22■□□□□ 0.51
TRAF6-202ENST00000526995 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
TRAF6-202ENST00000526995 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
TRAF6-202ENST00000526995 CCNB3Q8WWL7 1395 aa18.21■□□□□ 0.5
TRAF6-202ENST00000526995 FKBP8Q14318 412 aa18.21■□□□□ 0.5
TRAF6-202ENST00000526995 HIRIP3Q9BW71 556 aaPredicted RBP18.19■□□□□ 0.5
TRAF6-202ENST00000526995 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
TRAF6-202ENST00000526995 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
TRAF6-202ENST00000526995 SLC24A1O60721 1099 aa18.16■□□□□ 0.5
TRAF6-202ENST00000526995 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
TRAF6-202ENST00000526995 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
TRAF6-202ENST00000526995 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
TRAF6-202ENST00000526995 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
TRAF6-202ENST00000526995 SALL2Q9Y467 1007 aaPredicted RBP18.09■□□□□ 0.49
TRAF6-202ENST00000526995 WDR43Q15061 677 aaKnown RBP eCLIP18.08■□□□□ 0.49
TRAF6-202ENST00000526995 RGL3Q3MIN7 710 aa18.08■□□□□ 0.48
TRAF6-202ENST00000526995 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
TRAF6-202ENST00000526995 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
TRAF6-202ENST00000526995 SIN3AQ96ST3 1273 aa18.06■□□□□ 0.48
TRAF6-202ENST00000526995 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
TRAF6-202ENST00000526995 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
TRAF6-202ENST00000526995 BCL11AQ9H165 835 aa18.02■□□□□ 0.48
TRAF6-202ENST00000526995 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
TRAF6-202ENST00000526995 ARHGAP35Q9NRY4 1499 aa18■□□□□ 0.47
TRAF6-202ENST00000526995 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
TRAF6-202ENST00000526995 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
TRAF6-202ENST00000526995 CDCA8Q53HL2 280 aa17.98■□□□□ 0.47
TRAF6-202ENST00000526995 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
TRAF6-202ENST00000526995 CCDC136Q96JN2 1154 aa17.97■□□□□ 0.47
TRAF6-202ENST00000526995 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
TRAF6-202ENST00000526995 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
TRAF6-202ENST00000526995 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
TRAF6-202ENST00000526995 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
TRAF6-202ENST00000526995 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
TRAF6-202ENST00000526995 KNSTRNQ9Y448 316 aa17.88■□□□□ 0.45
TRAF6-202ENST00000526995 UPF2Q9HAU5 1272 aaKnown RBP17.86■□□□□ 0.45
TRAF6-202ENST00000526995 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
TRAF6-202ENST00000526995 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
TRAF6-202ENST00000526995 FHOD3Q2V2M9 1422 aa17.84■□□□□ 0.45
TRAF6-202ENST00000526995 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
TRAF6-202ENST00000526995 IRX6P78412 446 aaPredicted RBP17.82■□□□□ 0.44
TRAF6-202ENST00000526995 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
TRAF6-202ENST00000526995 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
TRAF6-202ENST00000526995 DCAF11Q8TEB1 546 aa17.81■□□□□ 0.44
TRAF6-202ENST00000526995 KANK1Q14678 1352 aa17.81■□□□□ 0.44
TRAF6-202ENST00000526995 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
TRAF6-202ENST00000526995 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
TRAF6-202ENST00000526995 PKD2Q13563 968 aa17.78■□□□□ 0.44
TRAF6-202ENST00000526995 EFCAB2Q5VUJ9 269 aa17.76■□□□□ 0.43
TRAF6-202ENST00000526995 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
TRAF6-202ENST00000526995 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
TRAF6-202ENST00000526995 ANKRD30AQ9BXX3 1397 aa17.74■□□□□ 0.43
TRAF6-202ENST00000526995 TMF1P82094 1093 aa17.73■□□□□ 0.43
TRAF6-202ENST00000526995 JPH4Q96JJ6 628 aa17.73■□□□□ 0.43
TRAF6-202ENST00000526995 HSP90AA1P07900 732 aaKnown RBP17.73■□□□□ 0.43
TRAF6-202ENST00000526995 CCDC18Q5T9S5 1454 aa17.71■□□□□ 0.43
TRAF6-202ENST00000526995 POGKQ9P215 609 aa17.71■□□□□ 0.43
TRAF6-202ENST00000526995 HSPA5P11021 654 aaKnown RBP17.7■□□□□ 0.42
TRAF6-202ENST00000526995 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
TRAF6-202ENST00000526995 NUP155O75694 1391 aa17.7■□□□□ 0.42
TRAF6-202ENST00000526995 CCER2I3L3R5 266 aa17.7■□□□□ 0.42
TRAF6-202ENST00000526995 FOXD1Q16676 465 aa17.7■□□□□ 0.42
TRAF6-202ENST00000526995 IGF1RP08069 1367 aa17.68■□□□□ 0.42
TRAF6-202ENST00000526995 RSPH4AQ5TD94 716 aa17.68■□□□□ 0.42
TRAF6-202ENST00000526995 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
TRAF6-202ENST00000526995 C14orf37Q86TY3 774 aa17.67■□□□□ 0.42
TRAF6-202ENST00000526995 MYH16Q9H6N6 1097 aa17.66■□□□□ 0.42
TRAF6-202ENST00000526995 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
TRAF6-202ENST00000526995 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
TRAF6-202ENST00000526995 CC2D1BQ5T0F9 858 aaKnown RBP17.64■□□□□ 0.41
TRAF6-202ENST00000526995 GGT6Q6P531 493 aa17.64■□□□□ 0.41
TRAF6-202ENST00000526995 PPM1GO15355 546 aaPredicted RBP17.63■□□□□ 0.41
TRAF6-202ENST00000526995 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
TRAF6-202ENST00000526995 MAPK8IP3Q9UPT6 1336 aa17.61■□□□□ 0.41
TRAF6-202ENST00000526995 HNRNPMP52272 730 aaKnown RBP eCLIP17.6■□□□□ 0.41
TRAF6-202ENST00000526995 HDGFP51858 240 aaKnown RBP17.6■□□□□ 0.41
TRAF6-202ENST00000526995 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
TRAF6-202ENST00000526995 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
TRAF6-202ENST00000526995 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.4
TRAF6-202ENST00000526995 PPP4R2Q9NY27 417 aa17.57■□□□□ 0.4
TRAF6-202ENST00000526995 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
TRAF6-202ENST00000526995 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
TRAF6-202ENST00000526995 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
TRAF6-202ENST00000526995 MLECQ14165 292 aa17.56■□□□□ 0.4
TRAF6-202ENST00000526995 SPAG9O60271 1321 aaKnown RBP17.55■□□□□ 0.4
TRAF6-202ENST00000526995 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
TRAF6-202ENST00000526995 ROCK2O75116 1388 aaKnown RBP17.54■□□□□ 0.4
TRAF6-202ENST00000526995 KIF3BO15066 747 aa17.54■□□□□ 0.4
TRAF6-202ENST00000526995 PTPRGP23470 1445 aa17.53■□□□□ 0.4
TRAF6-202ENST00000526995 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
TRAF6-202ENST00000526995 SRPK2P78362 688 aaKnown RBP17.52■□□□□ 0.4
TRAF6-202ENST00000526995 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms