RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 ABCC10Q5T3U5 1492 aa35.54■■■■□ 3.28
AMBRA1-205ENST00000526606 SUPT5HO00267 1087 aaKnown RBP35.45■■■■□ 3.27
AMBRA1-205ENST00000526606 KDM4FA0A1W2PPD8 638 aa35.44■■■■□ 3.26
AMBRA1-205ENST00000526606 MAPKBP1O60336 1514 aa35.42■■■■□ 3.26
AMBRA1-205ENST00000526606 DIP2BQ9P265 1576 aa35.4■■■■□ 3.26
AMBRA1-205ENST00000526606 NPM1P06748 294 aaKnown RBP eCLIP35.4■■■■□ 3.26
AMBRA1-205ENST00000526606 RUSC2Q8N2Y8 1516 aa35.39■■■■□ 3.26
AMBRA1-205ENST00000526606 ADCY10Q96PN6 1610 aa35.36■■■■□ 3.25
AMBRA1-205ENST00000526606 KDM6BO15054 1643 aa35.25■■■■□ 3.23
AMBRA1-205ENST00000526606 TSPOAP1O95153 1857 aa35.19■■■■□ 3.22
AMBRA1-205ENST00000526606 KIAA0586Q9BVV6 1533 aa35.16■■■■□ 3.22
AMBRA1-205ENST00000526606 ILDR1Q86SU0 546 aaPredicted RBP35.12■■■■□ 3.21
AMBRA1-205ENST00000526606 IGF1RP08069 1367 aa35.1■■■■□ 3.21
AMBRA1-205ENST00000526606 PTPRGP23470 1445 aa34.99■■■■□ 3.19
AMBRA1-205ENST00000526606 PPRC1Q5VV67 1664 aaKnown RBP34.92■■■■□ 3.18
AMBRA1-205ENST00000526606 TTBK1Q5TCY1 1321 aaPredicted RBP34.91■■■■□ 3.18
AMBRA1-205ENST00000526606 ABCC2Q92887 1545 aa34.9■■■■□ 3.18
AMBRA1-205ENST00000526606 CUL7Q14999 1698 aa34.89■■■■□ 3.18
AMBRA1-205ENST00000526606 ASXL2Q76L83 1435 aa34.88■■■■□ 3.17
AMBRA1-205ENST00000526606 KIF27Q86VH2 1401 aa34.88■■■■□ 3.17
AMBRA1-205ENST00000526606 GLI2P10070 1586 aa34.86■■■■□ 3.17
AMBRA1-205ENST00000526606 TNIKQ9UKE5 1360 aa34.85■■■■□ 3.17
AMBRA1-205ENST00000526606 ADGRL1O94910 1474 aa34.84■■■■□ 3.17
AMBRA1-205ENST00000526606 COL17A1Q9UMD9 1497 aaPredicted RBP34.84■■■■□ 3.17
AMBRA1-205ENST00000526606 PLB1Q6P1J6 1458 aa34.83■■■■□ 3.17
AMBRA1-205ENST00000526606 CARMIL1Q5VZK9 1371 aa34.78■■■■□ 3.16
AMBRA1-205ENST00000526606 CARMIL2Q6F5E8 1435 aa34.77■■■■□ 3.16
AMBRA1-205ENST00000526606 UHRF1BP1LA0JNW5 1464 aa34.76■■■■□ 3.15
AMBRA1-205ENST00000526606 UACAQ9BZF9 1416 aa34.7■■■■□ 3.15
AMBRA1-205ENST00000526606 EPRSP07814 1512 aaKnown RBP34.67■■■■□ 3.14
AMBRA1-205ENST00000526606 IQGAP2Q13576 1575 aa34.66■■■■□ 3.14
AMBRA1-205ENST00000526606 DISP1Q96F81 1524 aa34.65■■■■□ 3.14
AMBRA1-205ENST00000526606 MAP3K4Q9Y6R4 1608 aa34.64■■■■□ 3.14
AMBRA1-205ENST00000526606 KDM5BQ9UGL1 1544 aa34.62■■■■□ 3.13
AMBRA1-205ENST00000526606 HECW2Q9P2P5 1572 aa34.61■■■■□ 3.13
AMBRA1-205ENST00000526606 TEX14Q8IWB6 1497 aa34.52■■■■□ 3.12
AMBRA1-205ENST00000526606 ZCCHC11Q5TAX3 1644 aaKnown RBP34.51■■■■□ 3.11
AMBRA1-205ENST00000526606 UGGT2Q9NYU1 1516 aa34.46■■■■□ 3.11
AMBRA1-205ENST00000526606 KIAA0556O60303 1618 aa34.37■■■■□ 3.09
AMBRA1-205ENST00000526606 WDR7Q9Y4E6 1490 aa34.37■■■■□ 3.09
AMBRA1-205ENST00000526606 RAPGEF2Q9Y4G8 1499 aa34.33■■■■□ 3.09
AMBRA1-205ENST00000526606 MAGI3Q5TCQ9 1506 aa34.28■■■■□ 3.08
AMBRA1-205ENST00000526606 CD109Q6YHK3 1445 aa34.28■■■■□ 3.08
AMBRA1-205ENST00000526606 KCNH8Q96L42 1107 aa34.24■■■■□ 3.07
AMBRA1-205ENST00000526606 CFAP43Q8NDM7 1665 aa34.2■■■■□ 3.07
AMBRA1-205ENST00000526606 ABCA8O94911 1581 aa34.15■■■■□ 3.06
AMBRA1-205ENST00000526606 KIF21BO75037 1637 aa34.14■■■■□ 3.06
AMBRA1-205ENST00000526606 FBXO41Q8TF61 875 aa34.11■■■■□ 3.05
AMBRA1-205ENST00000526606 ARAP3Q8WWN8 1544 aa34.05■■■■□ 3.04
AMBRA1-205ENST00000526606 CTTNBP2Q8WZ74 1663 aa34.03■■■■□ 3.04
AMBRA1-205ENST00000526606 GOLGA3Q08378 1498 aa34.03■■■■□ 3.04
AMBRA1-205ENST00000526606 PTPRMP28827 1452 aa33.96■■■■□ 3.03
AMBRA1-205ENST00000526606 ADAMTSL3P82987 1691 aa33.95■■■■□ 3.03
AMBRA1-205ENST00000526606 ATP10BO94823 1461 aa33.92■■■■□ 3.02
AMBRA1-205ENST00000526606 ARID3CA6NKF2 412 aa33.91■■■■□ 3.02
AMBRA1-205ENST00000526606 RAPGEF3O95398 923 aa33.89■■■■□ 3.02
AMBRA1-205ENST00000526606 PHLDB1Q86UU1 1377 aa33.85■■■■□ 3.01
AMBRA1-205ENST00000526606 PRXQ9BXM0 1461 aa33.84■■■■□ 3.01
AMBRA1-205ENST00000526606 ABCA9Q8IUA7 1624 aa33.83■■■■□ 3.01
AMBRA1-205ENST00000526606 P3H3Q8IVL6 736 aa33.81■■■■□ 3
AMBRA1-205ENST00000526606 BCORL1Q5H9F3 1711 aa33.76■■■■□ 3
AMBRA1-205ENST00000526606 LMTK3Q96Q04 1460 aa33.74■■■□□ 2.99
AMBRA1-205ENST00000526606 PCF11O94913 1555 aaKnown RBP33.73■■■□□ 2.99
AMBRA1-205ENST00000526606 FRMPD1Q5SYB0 1578 aa33.73■■■□□ 2.99
AMBRA1-205ENST00000526606 MADDQ8WXG6 1647 aa33.73■■■□□ 2.99
AMBRA1-205ENST00000526606 NEO1Q92859 1461 aa33.73■■■□□ 2.99
AMBRA1-205ENST00000526606 ARID4BQ4LE39 1312 aaPredicted RBP33.68■■■□□ 2.98
AMBRA1-205ENST00000526606 FAM9AQ8IZU1 332 aaPredicted RBP33.63■■■□□ 2.97
AMBRA1-205ENST00000526606 RAPGEF6Q8TEU7 1601 aa33.58■■■□□ 2.97
AMBRA1-205ENST00000526606 HSPA2P54652 639 aa33.58■■■□□ 2.97
AMBRA1-205ENST00000526606 SAMD9Q5K651 1589 aa33.58■■■□□ 2.97
AMBRA1-205ENST00000526606 RIMS1Q86UR5 1692 aaKnown RBP33.56■■■□□ 2.96
AMBRA1-205ENST00000526606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.55■■■□□ 2.96
AMBRA1-205ENST00000526606 HNRNPUL2Q1KMD3 747 aaKnown RBP33.55■■■□□ 2.96
AMBRA1-205ENST00000526606 NUP153P49790 1475 aaKnown RBP33.53■■■□□ 2.96
AMBRA1-205ENST00000526606 ARHGEF40Q8TER5 1519 aa33.53■■■□□ 2.96
AMBRA1-205ENST00000526606 RICTORQ6R327 1708 aa33.5■■■□□ 2.95
AMBRA1-205ENST00000526606 DENND4BO75064 1496 aaPredicted RBP33.5■■■□□ 2.95
AMBRA1-205ENST00000526606 FHOD3Q2V2M9 1422 aa33.47■■■□□ 2.95
AMBRA1-205ENST00000526606 AKNAQ7Z591 1439 aa33.47■■■□□ 2.95
AMBRA1-205ENST00000526606 SIGLEC1Q9BZZ2 1709 aa33.46■■■□□ 2.95
AMBRA1-205ENST00000526606 PLPPR3Q6T4P5 718 aa33.44■■■□□ 2.94
AMBRA1-205ENST00000526606 CERKQ8TCT0 537 aa33.43■■■□□ 2.94
AMBRA1-205ENST00000526606 FANCAO15360 1455 aa33.39■■■□□ 2.94
AMBRA1-205ENST00000526606 YEATS2Q9ULM3 1422 aa33.39■■■□□ 2.94
AMBRA1-205ENST00000526606 PLEKHD1A6NEE1 506 aa33.39■■■□□ 2.94
AMBRA1-205ENST00000526606 CSRNP3Q8WYN3 585 aa33.37■■■□□ 2.93
AMBRA1-205ENST00000526606 ZMYM4Q5VZL5 1548 aa33.36■■■□□ 2.93
AMBRA1-205ENST00000526606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.36■■■□□ 2.93
AMBRA1-205ENST00000526606 POGZQ7Z3K3 1410 aa33.35■■■□□ 2.93
AMBRA1-205ENST00000526606 RANGAP1P46060 587 aaPredicted RBP33.31■■■□□ 2.92
AMBRA1-205ENST00000526606 ZFYVE16Q7Z3T8 1539 aa33.31■■■□□ 2.92
AMBRA1-205ENST00000526606 MLECQ14165 292 aa33.3■■■□□ 2.92
AMBRA1-205ENST00000526606 TTC37Q6PGP7 1564 aa33.29■■■□□ 2.92
AMBRA1-205ENST00000526606 CFAP74Q9C0B2 1584 aa33.28■■■□□ 2.92
AMBRA1-205ENST00000526606 MAGI2Q86UL8 1455 aa33.26■■■□□ 2.92
AMBRA1-205ENST00000526606 EFCAB5A4FU69 1503 aa33.26■■■□□ 2.91
AMBRA1-205ENST00000526606 HECW1Q76N89 1606 aa33.25■■■□□ 2.91
AMBRA1-205ENST00000526606 FER1L4A9Z1Z3 1794 aa33.21■■■□□ 2.91
AMBRA1-205ENST00000526606 ILDR2Q71H61 639 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms