RNA–Protein interactions for RNA: ENST00000526508.5

ATG13-207, Transcript of autophagy related 13, humanhuman

TSL 5 BASIC

Gene ATG13, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-207ENST00000526508 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
ATG13-207ENST00000526508 ANP32BQ92688 251 aaKnown RBP13.46□□□□□ -0.25
ATG13-207ENST00000526508 NCLP19338 710 aaKnown RBP13.46□□□□□ -0.26
ATG13-207ENST00000526508 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
ATG13-207ENST00000526508 GSE1Q14687 1217 aa13.44□□□□□ -0.26
ATG13-207ENST00000526508 TRIM44Q96DX7 344 aaPredicted RBP13.44□□□□□ -0.26
ATG13-207ENST00000526508 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
ATG13-207ENST00000526508 L1TD1Q5T7N2 865 aaKnown RBP13.4□□□□□ -0.26
ATG13-207ENST00000526508 ZMYND15Q9H091 742 aa13.39□□□□□ -0.27
ATG13-207ENST00000526508 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
ATG13-207ENST00000526508 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
ATG13-207ENST00000526508 ARID4BQ4LE39 1312 aaPredicted RBP13.38□□□□□ -0.27
ATG13-207ENST00000526508 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
ATG13-207ENST00000526508 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
ATG13-207ENST00000526508 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
ATG13-207ENST00000526508 CDK11BP21127 795 aaKnown RBP13.35□□□□□ -0.27
ATG13-207ENST00000526508 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
ATG13-207ENST00000526508 MRS2Q9HD23 443 aa13.35□□□□□ -0.27
ATG13-207ENST00000526508 FAM43AQ8N2R8 423 aa13.3□□□□□ -0.28
ATG13-207ENST00000526508 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
ATG13-207ENST00000526508 BECN1Q14457 450 aa13.28□□□□□ -0.28
ATG13-207ENST00000526508 UPF2Q9HAU5 1272 aaKnown RBP13.27□□□□□ -0.28
ATG13-207ENST00000526508 RRP9O43818 475 aaKnown RBP13.27□□□□□ -0.29
ATG13-207ENST00000526508 PDE4CQ08493 712 aa13.27□□□□□ -0.29
ATG13-207ENST00000526508 CEP162Q5TB80 1403 aa13.27□□□□□ -0.29
ATG13-207ENST00000526508 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
ATG13-207ENST00000526508 TCERG1O14776 1098 aaKnown RBP13.25□□□□□ -0.29
ATG13-207ENST00000526508 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
ATG13-207ENST00000526508 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
ATG13-207ENST00000526508 NFKBIBQ15653 356 aa13.17□□□□□ -0.3
ATG13-207ENST00000526508 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
ATG13-207ENST00000526508 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
ATG13-207ENST00000526508 EEA1Q15075 1411 aa13.16□□□□□ -0.3
ATG13-207ENST00000526508 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.3
ATG13-207ENST00000526508 MSNP26038 577 aaKnown RBP13.14□□□□□ -0.31
ATG13-207ENST00000526508 ARID3AQ99856 593 aa13.14□□□□□ -0.31
ATG13-207ENST00000526508 PDE4AP27815 886 aa13.13□□□□□ -0.31
ATG13-207ENST00000526508 TMC1Q8TDI8 760 aa13.13□□□□□ -0.31
ATG13-207ENST00000526508 MYH16Q9H6N6 1097 aa13.12□□□□□ -0.31
ATG13-207ENST00000526508 TNIKQ9UKE5 1360 aa13.12□□□□□ -0.31
ATG13-207ENST00000526508 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
ATG13-207ENST00000526508 CANXP27824 592 aaKnown RBP13.09□□□□□ -0.31
ATG13-207ENST00000526508 RBM10P98175 930 aaKnown RBP13.08□□□□□ -0.32
ATG13-207ENST00000526508 DNTTIP2Q5QJE6 756 aaKnown RBP13.08□□□□□ -0.32
ATG13-207ENST00000526508 GZF1Q9H116 711 aaPredicted RBP13.07□□□□□ -0.32
ATG13-207ENST00000526508 SLC4A3P48751 1232 aa13.07□□□□□ -0.32
ATG13-207ENST00000526508 SIN3AQ96ST3 1273 aa13.07□□□□□ -0.32
ATG13-207ENST00000526508 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.06□□□□□ -0.32
ATG13-207ENST00000526508 MAP7D2Q96T17 732 aa13.06□□□□□ -0.32
ATG13-207ENST00000526508 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATG13-207ENST00000526508 TPM2P07951 284 aa13.05□□□□□ -0.32
ATG13-207ENST00000526508 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
ATG13-207ENST00000526508 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
ATG13-207ENST00000526508 CLIP1P30622 1438 aa13.03□□□□□ -0.32
ATG13-207ENST00000526508 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
ATG13-207ENST00000526508 MS4A1P11836 297 aa13.03□□□□□ -0.32
ATG13-207ENST00000526508 RGS3P49796 1198 aa13.03□□□□□ -0.32
ATG13-207ENST00000526508 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
ATG13-207ENST00000526508 PDIA4P13667 645 aaKnown RBP13.02□□□□□ -0.32
ATG13-207ENST00000526508 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.32
ATG13-207ENST00000526508 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.32
ATG13-207ENST00000526508 DHX57Q6P158 1386 aaKnown RBP13.02□□□□□ -0.33
ATG13-207ENST00000526508 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
ATG13-207ENST00000526508 PTMAP06454 111 aaKnown RBP13□□□□□ -0.33
ATG13-207ENST00000526508 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
ATG13-207ENST00000526508 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
ATG13-207ENST00000526508 PDCL3Q9H2J4 239 aa12.99□□□□□ -0.33
ATG13-207ENST00000526508 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
ATG13-207ENST00000526508 RB1CC1Q8TDY2 1594 aa12.97□□□□□ -0.33
ATG13-207ENST00000526508 MTERF4Q7Z6M4 381 aaKnown RBP12.97□□□□□ -0.33
ATG13-207ENST00000526508 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
ATG13-207ENST00000526508 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
ATG13-207ENST00000526508 GOLGA3Q08378 1498 aa12.94□□□□□ -0.34
ATG13-207ENST00000526508 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.93□□□□□ -0.34
ATG13-207ENST00000526508 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
ATG13-207ENST00000526508 TNNT3P45378 269 aaPredicted RBP12.91□□□□□ -0.34
ATG13-207ENST00000526508 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
ATG13-207ENST00000526508 FGD1P98174 961 aa12.9□□□□□ -0.34
ATG13-207ENST00000526508 MRE11P49959 708 aa12.9□□□□□ -0.34
ATG13-207ENST00000526508 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
ATG13-207ENST00000526508 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
ATG13-207ENST00000526508 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
ATG13-207ENST00000526508 ESPNB1AK53 854 aa12.88□□□□□ -0.35
ATG13-207ENST00000526508 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
ATG13-207ENST00000526508 CHAF1AQ13111 956 aaPredicted RBP12.86□□□□□ -0.35
ATG13-207ENST00000526508 KIAA1211Q6ZU35 1233 aa12.86□□□□□ -0.35
ATG13-207ENST00000526508 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
ATG13-207ENST00000526508 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
ATG13-207ENST00000526508 TAF7LQ5H9L4 462 aa12.86□□□□□ -0.35
ATG13-207ENST00000526508 CLCN1P35523 988 aa12.86□□□□□ -0.35
ATG13-207ENST00000526508 CALD1Q05682 793 aaKnown RBP12.85□□□□□ -0.35
ATG13-207ENST00000526508 PTMSP20962 102 aa12.85□□□□□ -0.35
ATG13-207ENST00000526508 GBP4Q96PP9 640 aa12.85□□□□□ -0.35
ATG13-207ENST00000526508 AAMPQ13685 434 aa12.84□□□□□ -0.35
ATG13-207ENST00000526508 CCNB3Q8WWL7 1395 aa12.84□□□□□ -0.35
ATG13-207ENST00000526508 R3HCC1Q9Y3T6 440 aaKnown RBP12.84□□□□□ -0.35
ATG13-207ENST00000526508 ZNF771Q7L3S4 317 aaPredicted RBP12.84□□□□□ -0.35
ATG13-207ENST00000526508 HSCBQ8IWL3 235 aa12.83□□□□□ -0.36
ATG13-207ENST00000526508 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
ATG13-207ENST00000526508 ZHX1Q9UKY1 873 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms