RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 UNC13AQ9UPW8 1703 aa11.89□□□□□ -0.51
CCDC90B-204ENST00000525504 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
CCDC90B-204ENST00000525504 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
CCDC90B-204ENST00000525504 PAK3O75914 559 aaPredicted RBP11.83□□□□□ -0.52
CCDC90B-204ENST00000525504 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
CCDC90B-204ENST00000525504 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-204ENST00000525504 C7P10643 843 aa11.78□□□□□ -0.52
CCDC90B-204ENST00000525504 LCE2DQ5TA82 110 aaPredicted RBP11.78□□□□□ -0.52
CCDC90B-204ENST00000525504 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
CCDC90B-204ENST00000525504 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-204ENST00000525504 SLC39A7Q92504 469 aa11.77□□□□□ -0.53
CCDC90B-204ENST00000525504 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
CCDC90B-204ENST00000525504 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
CCDC90B-204ENST00000525504 CECR2Q9BXF3 1484 aa11.75□□□□□ -0.53
CCDC90B-204ENST00000525504 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
CCDC90B-204ENST00000525504 EIF4G1Q04637 1599 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-204ENST00000525504 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.54
CCDC90B-204ENST00000525504 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-204ENST00000525504 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-204ENST00000525504 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
CCDC90B-204ENST00000525504 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC90B-204ENST00000525504 MS4A3Q96HJ5 214 aa11.6□□□□□ -0.55
CCDC90B-204ENST00000525504 MNX1P50219 401 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-204ENST00000525504 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
CCDC90B-204ENST00000525504 NCAPD3P42695 1498 aa11.53□□□□□ -0.56
CCDC90B-204ENST00000525504 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-204ENST00000525504 ATAD2BQ9ULI0 1458 aa11.46□□□□□ -0.57
CCDC90B-204ENST00000525504 POTEFA5A3E0 1075 aa11.45□□□□□ -0.58
CCDC90B-204ENST00000525504 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-204ENST00000525504 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
CCDC90B-204ENST00000525504 SMARCA2P51531 1590 aa11.37□□□□□ -0.59
CCDC90B-204ENST00000525504 TIE1P35590 1138 aa11.36□□□□□ -0.59
CCDC90B-204ENST00000525504 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
CCDC90B-204ENST00000525504 BAZ1AQ9NRL2 1556 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-204ENST00000525504 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
CCDC90B-204ENST00000525504 MMRN1Q13201 1228 aa11.34□□□□□ -0.59
CCDC90B-204ENST00000525504 HMGXB3Q12766 1538 aa11.33□□□□□ -0.6
CCDC90B-204ENST00000525504 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
CCDC90B-204ENST00000525504 MROH2BQ7Z745 1585 aa11.3□□□□□ -0.6
CCDC90B-204ENST00000525504 PEG3Q9GZU2 1588 aa11.3□□□□□ -0.6
CCDC90B-204ENST00000525504 ST18O60284 1047 aa11.3□□□□□ -0.6
CCDC90B-204ENST00000525504 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-204ENST00000525504 SEC24BO95487 1268 aa11.29□□□□□ -0.6
CCDC90B-204ENST00000525504 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
CCDC90B-204ENST00000525504 BAZ1BQ9UIG0 1483 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-204ENST00000525504 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-204ENST00000525504 IER5LQ5T953 404 aa11.27□□□□□ -0.61
CCDC90B-204ENST00000525504 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
CCDC90B-204ENST00000525504 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
CCDC90B-204ENST00000525504 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-204ENST00000525504 TTLL13PA6NNM8 815 aa11.22□□□□□ -0.61
CCDC90B-204ENST00000525504 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
CCDC90B-204ENST00000525504 CUX2O14529 1486 aa11.21□□□□□ -0.61
CCDC90B-204ENST00000525504 ERCC6Q03468 1493 aa11.21□□□□□ -0.61
CCDC90B-204ENST00000525504 NESP48681 1621 aa11.2□□□□□ -0.62
CCDC90B-204ENST00000525504 MAP3K13O43283 966 aa11.2□□□□□ -0.62
CCDC90B-204ENST00000525504 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
CCDC90B-204ENST00000525504 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-204ENST00000525504 PDS5BQ9NTI5 1447 aa11.16□□□□□ -0.62
CCDC90B-204ENST00000525504 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
CCDC90B-204ENST00000525504 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
CCDC90B-204ENST00000525504 LAMC3Q9Y6N6 1575 aa11.11□□□□□ -0.63
CCDC90B-204ENST00000525504 SNPHO15079 494 aa11.1□□□□□ -0.63
CCDC90B-204ENST00000525504 WIZO95785 1651 aa11.06□□□□□ -0.64
CCDC90B-204ENST00000525504 CFTRP13569 1480 aa11.05□□□□□ -0.64
CCDC90B-204ENST00000525504 PLCG2P16885 1265 aa11.04□□□□□ -0.64
CCDC90B-204ENST00000525504 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
CCDC90B-204ENST00000525504 PLEKHG5O94827 1062 aa11.01□□□□□ -0.65
CCDC90B-204ENST00000525504 PROM2Q8N271 834 aa11.01□□□□□ -0.65
CCDC90B-204ENST00000525504 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
CCDC90B-204ENST00000525504 EHMT2Q96KQ7 1210 aa11□□□□□ -0.65
CCDC90B-204ENST00000525504 PCDHB13Q9Y5F0 798 aa11□□□□□ -0.65
CCDC90B-204ENST00000525504 MRC2Q9UBG0 1479 aa11□□□□□ -0.65
CCDC90B-204ENST00000525504 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-204ENST00000525504 THOC2Q8NI27 1593 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-204ENST00000525504 IRX5P78411 483 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-204ENST00000525504 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
CCDC90B-204ENST00000525504 FANCD2Q9BXW9 1451 aa10.97□□□□□ -0.65
CCDC90B-204ENST00000525504 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-204ENST00000525504 CCDC88BA6NC98 1476 aa10.94□□□□□ -0.66
CCDC90B-204ENST00000525504 CEP164Q9UPV0 1460 aa10.94□□□□□ -0.66
CCDC90B-204ENST00000525504 WDR62O43379 1518 aa10.94□□□□□ -0.66
CCDC90B-204ENST00000525504 TMEM106CQ9BVX2 250 aa10.93□□□□□ -0.66
CCDC90B-204ENST00000525504 OCEL1Q9H607 264 aa10.92□□□□□ -0.66
CCDC90B-204ENST00000525504 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
CCDC90B-204ENST00000525504 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
CCDC90B-204ENST00000525504 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
CCDC90B-204ENST00000525504 EMP3P54852 163 aa10.89□□□□□ -0.67
CCDC90B-204ENST00000525504 MIER1Q8N108 512 aa10.88□□□□□ -0.67
CCDC90B-204ENST00000525504 KIF21AQ7Z4S6 1674 aa10.88□□□□□ -0.67
CCDC90B-204ENST00000525504 URB2Q14146 1524 aaKnown RBP10.86□□□□□ -0.67
CCDC90B-204ENST00000525504 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
CCDC90B-204ENST00000525504 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
CCDC90B-204ENST00000525504 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
CCDC90B-204ENST00000525504 ABCC8Q09428 1581 aa10.78□□□□□ -0.68
CCDC90B-204ENST00000525504 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
CCDC90B-204ENST00000525504 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
CCDC90B-204ENST00000525504 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
CCDC90B-204ENST00000525504 NUBP1P53384 320 aa10.77□□□□□ -0.69
CCDC90B-204ENST00000525504 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms