RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 C19orf67A6NJJ6 358 aa11.41□□□□□ -0.58
ATM-206ENST00000525056 HAX1O00165 279 aa11.41□□□□□ -0.58
ATM-206ENST00000525056 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
ATM-206ENST00000525056 DCAF8Q5TAQ9 597 aa11.37□□□□□ -0.59
ATM-206ENST00000525056 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
ATM-206ENST00000525056 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
ATM-206ENST00000525056 DCAF1Q9Y4B6 1507 aa11.36□□□□□ -0.59
ATM-206ENST00000525056 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
ATM-206ENST00000525056 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
ATM-206ENST00000525056 GSE1Q14687 1217 aa11.34□□□□□ -0.59
ATM-206ENST00000525056 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
ATM-206ENST00000525056 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
ATM-206ENST00000525056 EVX2Q03828 476 aa11.32□□□□□ -0.6
ATM-206ENST00000525056 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
ATM-206ENST00000525056 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
ATM-206ENST00000525056 PKD2Q13563 968 aa11.26□□□□□ -0.61
ATM-206ENST00000525056 SHROOM4Q9ULL8 1493 aa11.25□□□□□ -0.61
ATM-206ENST00000525056 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
ATM-206ENST00000525056 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
ATM-206ENST00000525056 PYGBP11216 843 aa11.22□□□□□ -0.61
ATM-206ENST00000525056 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
ATM-206ENST00000525056 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
ATM-206ENST00000525056 CC2D2AQ9P2K1 1620 aa11.21□□□□□ -0.61
ATM-206ENST00000525056 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
ATM-206ENST00000525056 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
ATM-206ENST00000525056 KIF12Q96FN5 646 aa11.18□□□□□ -0.62
ATM-206ENST00000525056 EIF4G1Q04637 1599 aaKnown RBP11.17□□□□□ -0.62
ATM-206ENST00000525056 MAP3K13O43283 966 aa11.15□□□□□ -0.62
ATM-206ENST00000525056 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
ATM-206ENST00000525056 CECR2Q9BXF3 1484 aa11.12□□□□□ -0.63
ATM-206ENST00000525056 CLCN6P51797 869 aa11.12□□□□□ -0.63
ATM-206ENST00000525056 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
ATM-206ENST00000525056 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
ATM-206ENST00000525056 GABBR2O75899 941 aa11.09□□□□□ -0.63
ATM-206ENST00000525056 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
ATM-206ENST00000525056 RGL2O15211 777 aa11.07□□□□□ -0.64
ATM-206ENST00000525056 IFNL1Q8IU54 200 aa11.07□□□□□ -0.64
ATM-206ENST00000525056 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
ATM-206ENST00000525056 PCDHB8Q9UN66 801 aa11.07□□□□□ -0.64
ATM-206ENST00000525056 GALR2O43603 387 aaPredicted RBP11.06□□□□□ -0.64
ATM-206ENST00000525056 ZNF467Q7Z7K2 595 aaPredicted RBP11.06□□□□□ -0.64
ATM-206ENST00000525056 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
ATM-206ENST00000525056 TRPC6Q9Y210 931 aa10.99□□□□□ -0.65
ATM-206ENST00000525056 VGFO15240 615 aaPredicted RBP10.97□□□□□ -0.65
ATM-206ENST00000525056 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
ATM-206ENST00000525056 PDAP1Q13442 181 aaKnown RBP10.96□□□□□ -0.65
ATM-206ENST00000525056 PSEN1P49768 467 aa10.95□□□□□ -0.66
ATM-206ENST00000525056 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
ATM-206ENST00000525056 TIE1P35590 1138 aa10.93□□□□□ -0.66
ATM-206ENST00000525056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
ATM-206ENST00000525056 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
ATM-206ENST00000525056 DCBLD2Q96PD2 775 aa10.92□□□□□ -0.66
ATM-206ENST00000525056 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
ATM-206ENST00000525056 TMEM106CQ9BVX2 250 aa10.91□□□□□ -0.66
ATM-206ENST00000525056 TTLL13PA6NNM8 815 aa10.89□□□□□ -0.67
ATM-206ENST00000525056 ATMINO43313 823 aaPredicted RBP10.88□□□□□ -0.67
ATM-206ENST00000525056 STK25O00506 426 aa10.87□□□□□ -0.67
ATM-206ENST00000525056 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
ATM-206ENST00000525056 HRCP23327 699 aa10.87□□□□□ -0.67
ATM-206ENST00000525056 ASTLQ6HA08 431 aaPredicted RBP10.87□□□□□ -0.67
ATM-206ENST00000525056 CHGAP10645 457 aaKnown RBP10.86□□□□□ -0.67
ATM-206ENST00000525056 ATN1P54259 1190 aaPredicted RBP10.85□□□□□ -0.67
ATM-206ENST00000525056 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
ATM-206ENST00000525056 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
ATM-206ENST00000525056 HS6ST3Q8IZP7 471 aa10.83□□□□□ -0.68
ATM-206ENST00000525056 TRIM35Q9UPQ4 493 aa10.82□□□□□ -0.68
ATM-206ENST00000525056 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
ATM-206ENST00000525056 CABP2Q9NPB3 220 aa10.81□□□□□ -0.68
ATM-206ENST00000525056 SMARCA4P51532 1647 aa10.8□□□□□ -0.68
ATM-206ENST00000525056 GOLGA2Q08379 1002 aa10.79□□□□□ -0.68
ATM-206ENST00000525056 EFCAB3Q8N7B9 438 aa10.76□□□□□ -0.69
ATM-206ENST00000525056 NCAPD3P42695 1498 aa10.75□□□□□ -0.69
ATM-206ENST00000525056 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
ATM-206ENST00000525056 ATAD2BQ9ULI0 1458 aa10.74□□□□□ -0.69
ATM-206ENST00000525056 DNAJC5Q9H3Z4 198 aa10.74□□□□□ -0.69
ATM-206ENST00000525056 IER5LQ5T953 404 aa10.73□□□□□ -0.69
ATM-206ENST00000525056 C7P10643 843 aa10.72□□□□□ -0.69
ATM-206ENST00000525056 SLC39A7Q92504 469 aa10.72□□□□□ -0.69
ATM-206ENST00000525056 HMGXB3Q12766 1538 aa10.72□□□□□ -0.69
ATM-206ENST00000525056 SMARCA2P51531 1590 aa10.72□□□□□ -0.69
ATM-206ENST00000525056 SOX12O15370 315 aa10.71□□□□□ -0.69
ATM-206ENST00000525056 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.69
ATM-206ENST00000525056 BAZ1AQ9NRL2 1556 aaPredicted RBP10.69□□□□□ -0.7
ATM-206ENST00000525056 NKX1-1Q15270 411 aaPredicted RBP10.69□□□□□ -0.7
ATM-206ENST00000525056 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
ATM-206ENST00000525056 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
ATM-206ENST00000525056 NESP48681 1621 aa10.68□□□□□ -0.7
ATM-206ENST00000525056 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
ATM-206ENST00000525056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.67□□□□□ -0.72e-8■■■■■ 28
ATM-206ENST00000525056 MROH2BQ7Z745 1585 aa10.67□□□□□ -0.7
ATM-206ENST00000525056 PEG3Q9GZU2 1588 aa10.66□□□□□ -0.7
ATM-206ENST00000525056 SEC24BO95487 1268 aa10.66□□□□□ -0.7
ATM-206ENST00000525056 ZEB1P37275 1124 aaPredicted RBP10.66□□□□□ -0.7
ATM-206ENST00000525056 MFRPQ9BY79 579 aa10.66□□□□□ -0.7
ATM-206ENST00000525056 PHF8Q9UPP1 1060 aa10.66□□□□□ -0.7
ATM-206ENST00000525056 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
ATM-206ENST00000525056 NLRP6P59044 892 aa10.65□□□□□ -0.7
ATM-206ENST00000525056 OCEL1Q9H607 264 aa10.65□□□□□ -0.7
ATM-206ENST00000525056 COLQQ9Y215 455 aaPredicted RBP10.65□□□□□ -0.7
ATM-206ENST00000525056 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms