RNA–Protein interactions for RNA: ENST00000524936.1

TTC17-204, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 3

Gene TTC17, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-204ENST00000524936 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
TTC17-204ENST00000524936 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
TTC17-204ENST00000524936 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
TTC17-204ENST00000524936 PHF12Q96QT6 1004 aa12.21□□□□□ -0.45
TTC17-204ENST00000524936 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
TTC17-204ENST00000524936 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
TTC17-204ENST00000524936 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
TTC17-204ENST00000524936 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
TTC17-204ENST00000524936 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
TTC17-204ENST00000524936 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
TTC17-204ENST00000524936 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
TTC17-204ENST00000524936 POTEMA6NI47 508 aa12.1□□□□□ -0.47
TTC17-204ENST00000524936 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
TTC17-204ENST00000524936 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
TTC17-204ENST00000524936 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
TTC17-204ENST00000524936 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
TTC17-204ENST00000524936 PAK3O75914 559 aaPredicted RBP12.06□□□□□ -0.48
TTC17-204ENST00000524936 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
TTC17-204ENST00000524936 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
TTC17-204ENST00000524936 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
TTC17-204ENST00000524936 PEG3Q9GZU2 1588 aa12.02□□□□□ -0.49
TTC17-204ENST00000524936 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.49
TTC17-204ENST00000524936 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
TTC17-204ENST00000524936 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
TTC17-204ENST00000524936 ERCC6Q03468 1493 aa12□□□□□ -0.49
TTC17-204ENST00000524936 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
TTC17-204ENST00000524936 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
TTC17-204ENST00000524936 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
TTC17-204ENST00000524936 NESP48681 1621 aa11.99□□□□□ -0.49
TTC17-204ENST00000524936 CUX2O14529 1486 aa11.97□□□□□ -0.49
TTC17-204ENST00000524936 LCE2DQ5TA82 110 aaPredicted RBP11.95□□□□□ -0.5
TTC17-204ENST00000524936 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
TTC17-204ENST00000524936 C7P10643 843 aa11.91□□□□□ -0.5
TTC17-204ENST00000524936 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
TTC17-204ENST00000524936 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
TTC17-204ENST00000524936 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
TTC17-204ENST00000524936 LAMC3Q9Y6N6 1575 aa11.87□□□□□ -0.51
TTC17-204ENST00000524936 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
TTC17-204ENST00000524936 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
TTC17-204ENST00000524936 CCDC61Q9Y6R9 512 aa11.85□□□□□ -0.51
TTC17-204ENST00000524936 WIZO95785 1651 aa11.84□□□□□ -0.51
TTC17-204ENST00000524936 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
TTC17-204ENST00000524936 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
TTC17-204ENST00000524936 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
TTC17-204ENST00000524936 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
TTC17-204ENST00000524936 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
TTC17-204ENST00000524936 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
TTC17-204ENST00000524936 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
TTC17-204ENST00000524936 BMP2KQ9NSY1 1161 aaPredicted RBP11.77□□□□□ -0.53
TTC17-204ENST00000524936 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
TTC17-204ENST00000524936 PROM2Q8N271 834 aa11.76□□□□□ -0.53
TTC17-204ENST00000524936 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
TTC17-204ENST00000524936 RSF1Q96T23 1441 aaPredicted RBP11.76□□□□□ -0.53
TTC17-204ENST00000524936 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
TTC17-204ENST00000524936 TOP2AP11388 1531 aaKnown RBP11.72□□□□□ -0.53
TTC17-204ENST00000524936 MRC2Q9UBG0 1479 aa11.72□□□□□ -0.53
TTC17-204ENST00000524936 MAP3K13O43283 966 aa11.71□□□□□ -0.53
TTC17-204ENST00000524936 WDR62O43379 1518 aa11.7□□□□□ -0.54
TTC17-204ENST00000524936 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
TTC17-204ENST00000524936 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
TTC17-204ENST00000524936 TIE1P35590 1138 aa11.67□□□□□ -0.54
TTC17-204ENST00000524936 RASEFQ8IZ41 740 aa11.67□□□□□ -0.54
TTC17-204ENST00000524936 CFTRP13569 1480 aa11.66□□□□□ -0.54
TTC17-204ENST00000524936 FANCD2Q9BXW9 1451 aa11.66□□□□□ -0.54
TTC17-204ENST00000524936 TTLL13PA6NNM8 815 aa11.63□□□□□ -0.55
TTC17-204ENST00000524936 URB2Q14146 1524 aaKnown RBP11.59□□□□□ -0.55
TTC17-204ENST00000524936 SEC24BO95487 1268 aa11.56□□□□□ -0.56
TTC17-204ENST00000524936 CDAN1Q8IWY9 1227 aa11.56□□□□□ -0.56
TTC17-204ENST00000524936 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
TTC17-204ENST00000524936 MIER1Q8N108 512 aa11.55□□□□□ -0.56
TTC17-204ENST00000524936 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
TTC17-204ENST00000524936 PRDM2Q13029 1718 aa11.52□□□□□ -0.56
TTC17-204ENST00000524936 ST18O60284 1047 aa11.49□□□□□ -0.57
TTC17-204ENST00000524936 IER5LQ5T953 404 aa11.49□□□□□ -0.57
TTC17-204ENST00000524936 PCDHB13Q9Y5F0 798 aa11.49□□□□□ -0.57
TTC17-204ENST00000524936 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
TTC17-204ENST00000524936 IFNL1Q8IU54 200 aa11.46□□□□□ -0.57
TTC17-204ENST00000524936 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
TTC17-204ENST00000524936 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
TTC17-204ENST00000524936 PLEKHG5O94827 1062 aa11.45□□□□□ -0.58
TTC17-204ENST00000524936 NUBP1P53384 320 aa11.45□□□□□ -0.58
TTC17-204ENST00000524936 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
TTC17-204ENST00000524936 IFT140Q96RY7 1462 aa11.43□□□□□ -0.58
TTC17-204ENST00000524936 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
TTC17-204ENST00000524936 EIF4G3O43432 1585 aaKnown RBP11.39□□□□□ -0.59
TTC17-204ENST00000524936 TMEM106CQ9BVX2 250 aa11.39□□□□□ -0.59
TTC17-204ENST00000524936 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
TTC17-204ENST00000524936 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
TTC17-204ENST00000524936 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
TTC17-204ENST00000524936 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
TTC17-204ENST00000524936 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
TTC17-204ENST00000524936 PLCG2P16885 1265 aa11.35□□□□□ -0.59
TTC17-204ENST00000524936 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
TTC17-204ENST00000524936 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
TTC17-204ENST00000524936 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
TTC17-204ENST00000524936 AQRO60306 1485 aaKnown RBP eCLIP11.31□□□□□ -0.6
TTC17-204ENST00000524936 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
TTC17-204ENST00000524936 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
TTC17-204ENST00000524936 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
TTC17-204ENST00000524936 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms