RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 JPH4Q96JJ6 628 aa24.72■■□□□ 1.55
CSTF3-206ENST00000524827 ABCC10Q5T3U5 1492 aa24.58■■□□□ 1.53
CSTF3-206ENST00000524827 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
CSTF3-206ENST00000524827 ADCY10Q96PN6 1610 aa24.56■■□□□ 1.52
CSTF3-206ENST00000524827 FAM69CQ0P6D2 419 aa24.55■■□□□ 1.52
CSTF3-206ENST00000524827 NPM1P06748 294 aaKnown RBP eCLIP24.54■■□□□ 1.52
CSTF3-206ENST00000524827 DIP2BQ9P265 1576 aa24.54■■□□□ 1.52
CSTF3-206ENST00000524827 KIAA0586Q9BVV6 1533 aa24.53■■□□□ 1.52
CSTF3-206ENST00000524827 IGF1RP08069 1367 aa24.51■■□□□ 1.51
CSTF3-206ENST00000524827 CUL7Q14999 1698 aa24.5■■□□□ 1.51
CSTF3-206ENST00000524827 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
CSTF3-206ENST00000524827 KDM6BO15054 1643 aa24.39■■□□□ 1.49
CSTF3-206ENST00000524827 PTPRGP23470 1445 aa24.35■■□□□ 1.49
CSTF3-206ENST00000524827 TSPOAP1O95153 1857 aa24.35■■□□□ 1.49
CSTF3-206ENST00000524827 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
CSTF3-206ENST00000524827 CARMIL2Q6F5E8 1435 aa24.29■■□□□ 1.48
CSTF3-206ENST00000524827 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
CSTF3-206ENST00000524827 TNIKQ9UKE5 1360 aa24.29■■□□□ 1.48
CSTF3-206ENST00000524827 ABCC2Q92887 1545 aa24.28■■□□□ 1.48
CSTF3-206ENST00000524827 IQGAP2Q13576 1575 aa24.27■■□□□ 1.48
CSTF3-206ENST00000524827 KDM4FA0A1W2PPD8 638 aa24.24■■□□□ 1.47
CSTF3-206ENST00000524827 ASXL2Q76L83 1435 aa24.22■■□□□ 1.47
CSTF3-206ENST00000524827 UHRF1BP1LA0JNW5 1464 aa24.2■■□□□ 1.47
CSTF3-206ENST00000524827 PLB1Q6P1J6 1458 aa24.2■■□□□ 1.47
CSTF3-206ENST00000524827 GLI2P10070 1586 aa24.19■■□□□ 1.46
CSTF3-206ENST00000524827 PPRC1Q5VV67 1664 aaKnown RBP24.18■■□□□ 1.46
CSTF3-206ENST00000524827 DISP1Q96F81 1524 aa24.18■■□□□ 1.46
CSTF3-206ENST00000524827 UACAQ9BZF9 1416 aa24.17■■□□□ 1.46
CSTF3-206ENST00000524827 UGGT2Q9NYU1 1516 aa24.11■■□□□ 1.45
CSTF3-206ENST00000524827 RAPGEF2Q9Y4G8 1499 aa24.1■■□□□ 1.45
CSTF3-206ENST00000524827 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
CSTF3-206ENST00000524827 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.45
CSTF3-206ENST00000524827 KIAA0556O60303 1618 aa24.06■■□□□ 1.44
CSTF3-206ENST00000524827 ZCCHC11Q5TAX3 1644 aaKnown RBP24.05■■□□□ 1.44
CSTF3-206ENST00000524827 MAP3K4Q9Y6R4 1608 aa24.05■■□□□ 1.44
CSTF3-206ENST00000524827 COL17A1Q9UMD9 1497 aaPredicted RBP24.03■■□□□ 1.44
CSTF3-206ENST00000524827 ADGRL1O94910 1474 aa24.01■■□□□ 1.43
CSTF3-206ENST00000524827 TEX14Q8IWB6 1497 aa24■■□□□ 1.43
CSTF3-206ENST00000524827 WDR7Q9Y4E6 1490 aa23.94■■□□□ 1.42
CSTF3-206ENST00000524827 CTTNBP2Q8WZ74 1663 aa23.93■■□□□ 1.42
CSTF3-206ENST00000524827 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
CSTF3-206ENST00000524827 ABCA8O94911 1581 aa23.86■■□□□ 1.41
CSTF3-206ENST00000524827 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.4
CSTF3-206ENST00000524827 MAGI3Q5TCQ9 1506 aa23.82■■□□□ 1.4
CSTF3-206ENST00000524827 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
CSTF3-206ENST00000524827 PRXQ9BXM0 1461 aa23.79■■□□□ 1.4
CSTF3-206ENST00000524827 ILDR1Q86SU0 546 aaPredicted RBP23.78■■□□□ 1.4
CSTF3-206ENST00000524827 HECW2Q9P2P5 1572 aa23.78■■□□□ 1.4
CSTF3-206ENST00000524827 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
CSTF3-206ENST00000524827 KIF21BO75037 1637 aa23.66■■□□□ 1.38
CSTF3-206ENST00000524827 ARID3CA6NKF2 412 aa23.65■■□□□ 1.38
CSTF3-206ENST00000524827 ATP10BO94823 1461 aa23.64■■□□□ 1.38
CSTF3-206ENST00000524827 ARAP3Q8WWN8 1544 aa23.64■■□□□ 1.37
CSTF3-206ENST00000524827 P3H3Q8IVL6 736 aa23.62■■□□□ 1.37
CSTF3-206ENST00000524827 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
CSTF3-206ENST00000524827 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
CSTF3-206ENST00000524827 SAMD9Q5K651 1589 aa23.58■■□□□ 1.37
CSTF3-206ENST00000524827 RAPGEF6Q8TEU7 1601 aa23.54■■□□□ 1.36
CSTF3-206ENST00000524827 PHLDB1Q86UU1 1377 aa23.53■■□□□ 1.36
CSTF3-206ENST00000524827 NEO1Q92859 1461 aa23.49■■□□□ 1.35
CSTF3-206ENST00000524827 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
CSTF3-206ENST00000524827 ADAMTSL3P82987 1691 aa23.48■■□□□ 1.35
CSTF3-206ENST00000524827 RAPGEF3O95398 923 aa23.47■■□□□ 1.35
CSTF3-206ENST00000524827 NUP153P49790 1475 aaKnown RBP23.46■■□□□ 1.35
CSTF3-206ENST00000524827 FRMPD1Q5SYB0 1578 aa23.46■■□□□ 1.35
CSTF3-206ENST00000524827 PTPRMP28827 1452 aa23.45■■□□□ 1.34
CSTF3-206ENST00000524827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
CSTF3-206ENST00000524827 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
CSTF3-206ENST00000524827 FHOD3Q2V2M9 1422 aa23.41■■□□□ 1.34
CSTF3-206ENST00000524827 BCORL1Q5H9F3 1711 aa23.4■■□□□ 1.34
CSTF3-206ENST00000524827 RANGAP1P46060 587 aaPredicted RBP23.38■■□□□ 1.33
CSTF3-206ENST00000524827 MADDQ8WXG6 1647 aa23.37■■□□□ 1.33
CSTF3-206ENST00000524827 EEA1Q15075 1411 aa23.36■■□□□ 1.33
CSTF3-206ENST00000524827 ARHGEF40Q8TER5 1519 aa23.36■■□□□ 1.33
CSTF3-206ENST00000524827 ARID4BQ4LE39 1312 aaPredicted RBP23.34■■□□□ 1.33
CSTF3-206ENST00000524827 DENND4BO75064 1496 aaPredicted RBP23.32■■□□□ 1.32
CSTF3-206ENST00000524827 RICTORQ6R327 1708 aa23.32■■□□□ 1.32
CSTF3-206ENST00000524827 PLEKHD1A6NEE1 506 aa23.31■■□□□ 1.32
CSTF3-206ENST00000524827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.3■■□□□ 1.32
CSTF3-206ENST00000524827 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
CSTF3-206ENST00000524827 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
CSTF3-206ENST00000524827 CFAP74Q9C0B2 1584 aa23.3■■□□□ 1.32
CSTF3-206ENST00000524827 FANCAO15360 1455 aa23.3■■□□□ 1.32
CSTF3-206ENST00000524827 EFCAB5A4FU69 1503 aa23.28■■□□□ 1.32
CSTF3-206ENST00000524827 TTC37Q6PGP7 1564 aa23.28■■□□□ 1.32
CSTF3-206ENST00000524827 FBXO41Q8TF61 875 aa23.28■■□□□ 1.32
CSTF3-206ENST00000524827 LMTK3Q96Q04 1460 aa23.27■■□□□ 1.32
CSTF3-206ENST00000524827 RIMS1Q86UR5 1692 aaKnown RBP23.27■■□□□ 1.32
CSTF3-206ENST00000524827 ZMYM4Q5VZL5 1548 aa23.24■■□□□ 1.31
CSTF3-206ENST00000524827 CDK13Q14004 1512 aaKnown RBP23.22■■□□□ 1.31
CSTF3-206ENST00000524827 ZFYVE16Q7Z3T8 1539 aa23.21■■□□□ 1.31
CSTF3-206ENST00000524827 YEATS2Q9ULM3 1422 aa23.2■■□□□ 1.3
CSTF3-206ENST00000524827 SIGLEC1Q9BZZ2 1709 aa23.19■■□□□ 1.3
CSTF3-206ENST00000524827 POGZQ7Z3K3 1410 aa23.18■■□□□ 1.3
CSTF3-206ENST00000524827 MAGI2Q86UL8 1455 aa23.16■■□□□ 1.3
CSTF3-206ENST00000524827 HECW1Q76N89 1606 aa23.15■■□□□ 1.3
CSTF3-206ENST00000524827 PLCH2O75038 1416 aa23.13■■□□□ 1.29
CSTF3-206ENST00000524827 PLPPR3Q6T4P5 718 aa23.12■■□□□ 1.29
CSTF3-206ENST00000524827 SCAPERQ9BY12 1400 aa23.12■■□□□ 1.29
CSTF3-206ENST00000524827 HSPA2P54652 639 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms