RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.261e-8■■□□□ 13.5
CTNND1-210ENST00000524630 TRIM44Q96DX7 344 aaPredicted RBP13.44□□□□□ -0.26
CTNND1-210ENST00000524630 BECN1Q14457 450 aa13.42□□□□□ -0.26
CTNND1-210ENST00000524630 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
CTNND1-210ENST00000524630 EEA1Q15075 1411 aa13.41□□□□□ -0.26
CTNND1-210ENST00000524630 RRP7BPQ9NSQ0 103 aa13.4□□□□□ -0.26
CTNND1-210ENST00000524630 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
CTNND1-210ENST00000524630 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
CTNND1-210ENST00000524630 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
CTNND1-210ENST00000524630 NAP1L5Q96NT1 182 aaPredicted RBP13.38□□□□□ -0.27
CTNND1-210ENST00000524630 PPM1GO15355 546 aaPredicted RBP13.37□□□□□ -0.27
CTNND1-210ENST00000524630 DEKP35659 375 aaKnown RBP13.37□□□□□ -0.27
CTNND1-210ENST00000524630 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
CTNND1-210ENST00000524630 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
CTNND1-210ENST00000524630 PPP4R2Q9NY27 417 aa13.35□□□□□ -0.27
CTNND1-210ENST00000524630 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
CTNND1-210ENST00000524630 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
CTNND1-210ENST00000524630 MYH16Q9H6N6 1097 aa13.33□□□□□ -0.28
CTNND1-210ENST00000524630 RB1CC1Q8TDY2 1594 aa13.33□□□□□ -0.28
CTNND1-210ENST00000524630 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
CTNND1-210ENST00000524630 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
CTNND1-210ENST00000524630 CEP164Q9UPV0 1460 aa13.32□□□□□ -0.28
CTNND1-210ENST00000524630 ESF1Q9H501 851 aaKnown RBP13.3□□□□□ -0.28
CTNND1-210ENST00000524630 RBM19Q9Y4C8 960 aaKnown RBP13.3□□□□□ -0.28
CTNND1-210ENST00000524630 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
CTNND1-210ENST00000524630 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.28
CTNND1-210ENST00000524630 GOLGA6L22H0YM25 854 aa13.28□□□□□ -0.28
CTNND1-210ENST00000524630 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
CTNND1-210ENST00000524630 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
CTNND1-210ENST00000524630 PTMAP06454 111 aaKnown RBP13.25□□□□□ -0.29
CTNND1-210ENST00000524630 DNTTIP2Q5QJE6 756 aaKnown RBP13.25□□□□□ -0.29
CTNND1-210ENST00000524630 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
CTNND1-210ENST00000524630 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
CTNND1-210ENST00000524630 CARD11Q9BXL7 1154 aa13.21□□□□□ -0.3
CTNND1-210ENST00000524630 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
CTNND1-210ENST00000524630 KNSTRNQ9Y448 316 aa13.19□□□□□ -0.3
CTNND1-210ENST00000524630 SENP3Q9H4L4 574 aaPredicted RBP13.18□□□□□ -0.3
CTNND1-210ENST00000524630 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
CTNND1-210ENST00000524630 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTNND1-210ENST00000524630 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
CTNND1-210ENST00000524630 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
CTNND1-210ENST00000524630 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.18□□□□□ -0.3
CTNND1-210ENST00000524630 BAZ1BQ9UIG0 1483 aaKnown RBP13.18□□□□□ -0.3
CTNND1-210ENST00000524630 RGS3P49796 1198 aa13.17□□□□□ -0.3
CTNND1-210ENST00000524630 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
CTNND1-210ENST00000524630 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
CTNND1-210ENST00000524630 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
CTNND1-210ENST00000524630 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
CTNND1-210ENST00000524630 NACADO15069 1562 aa13.15□□□□□ -0.31
CTNND1-210ENST00000524630 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
CTNND1-210ENST00000524630 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
CTNND1-210ENST00000524630 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
CTNND1-210ENST00000524630 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
CTNND1-210ENST00000524630 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
CTNND1-210ENST00000524630 SOGA1O94964 1423 aa13.12□□□□□ -0.31
CTNND1-210ENST00000524630 HSP90AB1P08238 724 aaKnown RBP13.11□□□□□ -0.31
CTNND1-210ENST00000524630 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
CTNND1-210ENST00000524630 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
CTNND1-210ENST00000524630 PLEKHD1A6NEE1 506 aa13.1□□□□□ -0.31
CTNND1-210ENST00000524630 BAZ1AQ9NRL2 1556 aaPredicted RBP13.1□□□□□ -0.31
CTNND1-210ENST00000524630 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
CTNND1-210ENST00000524630 SETD5Q9C0A6 1442 aa13.09□□□□□ -0.31
CTNND1-210ENST00000524630 KCNH8Q96L42 1107 aa13.09□□□□□ -0.31
CTNND1-210ENST00000524630 ABCC8Q09428 1581 aa13.08□□□□□ -0.31
CTNND1-210ENST00000524630 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
CTNND1-210ENST00000524630 CDK11BP21127 795 aaKnown RBP13.08□□□□□ -0.32
CTNND1-210ENST00000524630 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
CTNND1-210ENST00000524630 PLCB2Q00722 1185 aa13.07□□□□□ -0.32
CTNND1-210ENST00000524630 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
CTNND1-210ENST00000524630 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
CTNND1-210ENST00000524630 MAPK8IP3Q9UPT6 1336 aa13.06□□□□□ -0.32
CTNND1-210ENST00000524630 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
CTNND1-210ENST00000524630 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
CTNND1-210ENST00000524630 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
CTNND1-210ENST00000524630 ZRSR1Q15695 479 aaKnown RBP13.04□□□□□ -0.32
CTNND1-210ENST00000524630 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
CTNND1-210ENST00000524630 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
CTNND1-210ENST00000524630 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
CTNND1-210ENST00000524630 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
CTNND1-210ENST00000524630 HSCBQ8IWL3 235 aa13.03□□□□□ -0.32
CTNND1-210ENST00000524630 TIMELESSQ9UNS1 1208 aa13.03□□□□□ -0.32
CTNND1-210ENST00000524630 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
CTNND1-210ENST00000524630 CECR2Q9BXF3 1484 aa13.02□□□□□ -0.33
CTNND1-210ENST00000524630 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
CTNND1-210ENST00000524630 TMF1P82094 1093 aa13□□□□□ -0.33
CTNND1-210ENST00000524630 MS4A1P11836 297 aa13□□□□□ -0.33
CTNND1-210ENST00000524630 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
CTNND1-210ENST00000524630 IPO9Q96P70 1041 aaKnown RBP12.99□□□□□ -0.33
CTNND1-210ENST00000524630 CHAF1AQ13111 956 aaPredicted RBP12.98□□□□□ -0.33
CTNND1-210ENST00000524630 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
CTNND1-210ENST00000524630 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
CTNND1-210ENST00000524630 CHMP4BQ9H444 224 aaKnown RBP12.97□□□□□ -0.33
CTNND1-210ENST00000524630 U2SURPO15042 1029 aaKnown RBP12.97□□□□□ -0.33
CTNND1-210ENST00000524630 ARID3AQ99856 593 aa12.97□□□□□ -0.33
CTNND1-210ENST00000524630 GZF1Q9H116 711 aaPredicted RBP12.97□□□□□ -0.33
CTNND1-210ENST00000524630 GOLGA6L6A8MZA4 724 aa12.96□□□□□ -0.33
CTNND1-210ENST00000524630 CUX2O14529 1486 aa12.96□□□□□ -0.33
CTNND1-210ENST00000524630 CCDC88BA6NC98 1476 aa12.95□□□□□ -0.34
CTNND1-210ENST00000524630 KTN1Q86UP2 1357 aaKnown RBP12.95□□□□□ -0.34
CTNND1-210ENST00000524630 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms