RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
SF3B2-203ENST00000524627 NPM1P06748 294 aaKnown RBP eCLIP22.49■■□□□ 1.19
SF3B2-203ENST00000524627 FAM69CQ0P6D2 419 aa22.48■■□□□ 1.19
SF3B2-203ENST00000524627 IGF1RP08069 1367 aa22.47■■□□□ 1.19
SF3B2-203ENST00000524627 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
SF3B2-203ENST00000524627 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
SF3B2-203ENST00000524627 KIAA0586Q9BVV6 1533 aa22.46■■□□□ 1.19
SF3B2-203ENST00000524627 ADCY10Q96PN6 1610 aa22.46■■□□□ 1.19
SF3B2-203ENST00000524627 MAPKBP1O60336 1514 aa22.45■■□□□ 1.18
SF3B2-203ENST00000524627 CUL7Q14999 1698 aa22.44■■□□□ 1.18
SF3B2-203ENST00000524627 DIP2BQ9P265 1576 aa22.41■■□□□ 1.18
SF3B2-203ENST00000524627 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
SF3B2-203ENST00000524627 TTBK1Q5TCY1 1321 aaPredicted RBP22.32■■□□□ 1.16
SF3B2-203ENST00000524627 PTPRGP23470 1445 aa22.31■■□□□ 1.16
SF3B2-203ENST00000524627 TSPOAP1O95153 1857 aa22.29■■□□□ 1.16
SF3B2-203ENST00000524627 KDM6BO15054 1643 aa22.28■■□□□ 1.16
SF3B2-203ENST00000524627 CARMIL2Q6F5E8 1435 aa22.26■■□□□ 1.15
SF3B2-203ENST00000524627 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
SF3B2-203ENST00000524627 IQGAP2Q13576 1575 aa22.23■■□□□ 1.15
SF3B2-203ENST00000524627 ABCC2Q92887 1545 aa22.21■■□□□ 1.15
SF3B2-203ENST00000524627 ASXL2Q76L83 1435 aa22.16■■□□□ 1.14
SF3B2-203ENST00000524627 KDM4FA0A1W2PPD8 638 aa22.14■■□□□ 1.13
SF3B2-203ENST00000524627 PLB1Q6P1J6 1458 aa22.14■■□□□ 1.13
SF3B2-203ENST00000524627 DISP1Q96F81 1524 aa22.13■■□□□ 1.13
SF3B2-203ENST00000524627 UHRF1BP1LA0JNW5 1464 aa22.13■■□□□ 1.13
SF3B2-203ENST00000524627 UACAQ9BZF9 1416 aa22.13■■□□□ 1.13
SF3B2-203ENST00000524627 GLI2P10070 1586 aa22.1■■□□□ 1.13
SF3B2-203ENST00000524627 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
SF3B2-203ENST00000524627 PPRC1Q5VV67 1664 aaKnown RBP22.08■■□□□ 1.13
SF3B2-203ENST00000524627 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
SF3B2-203ENST00000524627 KDM5BQ9UGL1 1544 aa22.04■■□□□ 1.12
SF3B2-203ENST00000524627 KIAA0556O60303 1618 aa22.03■■□□□ 1.12
SF3B2-203ENST00000524627 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
SF3B2-203ENST00000524627 ZCCHC11Q5TAX3 1644 aaKnown RBP22.01■■□□□ 1.11
SF3B2-203ENST00000524627 MAP3K4Q9Y6R4 1608 aa21.98■■□□□ 1.11
SF3B2-203ENST00000524627 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
SF3B2-203ENST00000524627 TEX14Q8IWB6 1497 aa21.94■■□□□ 1.1
SF3B2-203ENST00000524627 ADGRL1O94910 1474 aa21.93■■□□□ 1.1
SF3B2-203ENST00000524627 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
SF3B2-203ENST00000524627 WDR7Q9Y4E6 1490 aa21.91■■□□□ 1.1
SF3B2-203ENST00000524627 GOLGA3Q08378 1498 aa21.87■■□□□ 1.09
SF3B2-203ENST00000524627 ABCA8O94911 1581 aa21.83■■□□□ 1.09
SF3B2-203ENST00000524627 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
SF3B2-203ENST00000524627 PRXQ9BXM0 1461 aa21.81■■□□□ 1.08
SF3B2-203ENST00000524627 CD109Q6YHK3 1445 aa21.8■■□□□ 1.08
SF3B2-203ENST00000524627 CFAP43Q8NDM7 1665 aa21.79■■□□□ 1.08
SF3B2-203ENST00000524627 MAGI3Q5TCQ9 1506 aa21.77■■□□□ 1.08
SF3B2-203ENST00000524627 ARID3CA6NKF2 412 aa21.73■■□□□ 1.07
SF3B2-203ENST00000524627 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
SF3B2-203ENST00000524627 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
SF3B2-203ENST00000524627 ILDR1Q86SU0 546 aaPredicted RBP21.69■■□□□ 1.06
SF3B2-203ENST00000524627 FAM9AQ8IZU1 332 aaPredicted RBP21.68■■□□□ 1.06
SF3B2-203ENST00000524627 ATP10BO94823 1461 aa21.66■■□□□ 1.06
SF3B2-203ENST00000524627 KIF21BO75037 1637 aa21.62■■□□□ 1.05
SF3B2-203ENST00000524627 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
SF3B2-203ENST00000524627 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
SF3B2-203ENST00000524627 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
SF3B2-203ENST00000524627 ABCA9Q8IUA7 1624 aa21.58■■□□□ 1.05
SF3B2-203ENST00000524627 RAPGEF6Q8TEU7 1601 aa21.57■■□□□ 1.04
SF3B2-203ENST00000524627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
SF3B2-203ENST00000524627 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
SF3B2-203ENST00000524627 PHLDB1Q86UU1 1377 aa21.53■■□□□ 1.04
SF3B2-203ENST00000524627 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
SF3B2-203ENST00000524627 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
SF3B2-203ENST00000524627 NUP153P49790 1475 aaKnown RBP21.49■■□□□ 1.03
SF3B2-203ENST00000524627 NEO1Q92859 1461 aa21.49■■□□□ 1.03
SF3B2-203ENST00000524627 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
SF3B2-203ENST00000524627 EEA1Q15075 1411 aa21.45■■□□□ 1.02
SF3B2-203ENST00000524627 FRMPD1Q5SYB0 1578 aa21.44■■□□□ 1.02
SF3B2-203ENST00000524627 ADAMTSL3P82987 1691 aa21.44■■□□□ 1.02
SF3B2-203ENST00000524627 PTPRMP28827 1452 aa21.43■■□□□ 1.02
SF3B2-203ENST00000524627 ARID4BQ4LE39 1312 aaPredicted RBP21.4■■□□□ 1.02
SF3B2-203ENST00000524627 PLEKHD1A6NEE1 506 aa21.39■■□□□ 1.01
SF3B2-203ENST00000524627 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
SF3B2-203ENST00000524627 MADDQ8WXG6 1647 aa21.36■■□□□ 1.01
SF3B2-203ENST00000524627 DENND4BO75064 1496 aaPredicted RBP21.35■■□□□ 1.01
SF3B2-203ENST00000524627 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
SF3B2-203ENST00000524627 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
SF3B2-203ENST00000524627 EFCAB5A4FU69 1503 aa21.34■■□□□ 1.01
SF3B2-203ENST00000524627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.34■■□□□ 1.01
SF3B2-203ENST00000524627 FANCAO15360 1455 aa21.33■■□□□ 1.01
SF3B2-203ENST00000524627 RICTORQ6R327 1708 aa21.33■■□□□ 1.01
SF3B2-203ENST00000524627 TTC37Q6PGP7 1564 aa21.31■■□□□ 1
SF3B2-203ENST00000524627 CFAP74Q9C0B2 1584 aa21.31■■□□□ 1
SF3B2-203ENST00000524627 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
SF3B2-203ENST00000524627 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
SF3B2-203ENST00000524627 PCF11O94913 1555 aaKnown RBP21.27■■□□□ 1
SF3B2-203ENST00000524627 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
SF3B2-203ENST00000524627 LMTK3Q96Q04 1460 aa21.25■□□□□ 0.99
SF3B2-203ENST00000524627 ZMYM4Q5VZL5 1548 aa21.24■□□□□ 0.99
SF3B2-203ENST00000524627 FBXO41Q8TF61 875 aa21.24■□□□□ 0.99
SF3B2-203ENST00000524627 ZFYVE16Q7Z3T8 1539 aa21.24■□□□□ 0.99
SF3B2-203ENST00000524627 YEATS2Q9ULM3 1422 aa21.23■□□□□ 0.99
SF3B2-203ENST00000524627 PLPPR3Q6T4P5 718 aa21.23■□□□□ 0.99
SF3B2-203ENST00000524627 POGZQ7Z3K3 1410 aa21.21■□□□□ 0.99
SF3B2-203ENST00000524627 ATP1B4Q9UN42 357 aaPredicted RBP21.21■□□□□ 0.99
SF3B2-203ENST00000524627 SIGLEC1Q9BZZ2 1709 aa21.21■□□□□ 0.99
SF3B2-203ENST00000524627 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
SF3B2-203ENST00000524627 HECW1Q76N89 1606 aa21.19■□□□□ 0.98
SF3B2-203ENST00000524627 PLCH2O75038 1416 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms