RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.13
NSMCE2-213ENST00000523824 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
NSMCE2-213ENST00000523824 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
NSMCE2-213ENST00000523824 FAM69CQ0P6D2 419 aa14.18□□□□□ -0.14
NSMCE2-213ENST00000523824 KIF13AQ9H1H9 1805 aa14.14□□□□□ -0.15
NSMCE2-213ENST00000523824 ABCC10Q5T3U5 1492 aa14.12□□□□□ -0.15
NSMCE2-213ENST00000523824 RUSC2Q8N2Y8 1516 aa14.07□□□□□ -0.16
NSMCE2-213ENST00000523824 MAPKBP1O60336 1514 aa14.06□□□□□ -0.16
NSMCE2-213ENST00000523824 KIAA0586Q9BVV6 1533 aa14.04□□□□□ -0.16
NSMCE2-213ENST00000523824 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
NSMCE2-213ENST00000523824 ADCY10Q96PN6 1610 aa14.03□□□□□ -0.16
NSMCE2-213ENST00000523824 IGF1RP08069 1367 aa14.02□□□□□ -0.17
NSMCE2-213ENST00000523824 TTBK1Q5TCY1 1321 aaPredicted RBP14.02□□□□□ -0.17
NSMCE2-213ENST00000523824 KDM4FA0A1W2PPD8 638 aa14.02□□□□□ -0.17
NSMCE2-213ENST00000523824 KDM6BO15054 1643 aa14□□□□□ -0.17
NSMCE2-213ENST00000523824 PTPRGP23470 1445 aa13.99□□□□□ -0.17
NSMCE2-213ENST00000523824 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
NSMCE2-213ENST00000523824 TSPOAP1O95153 1857 aa13.95□□□□□ -0.18
NSMCE2-213ENST00000523824 CUL7Q14999 1698 aa13.95□□□□□ -0.18
NSMCE2-213ENST00000523824 CARMIL2Q6F5E8 1435 aa13.94□□□□□ -0.18
NSMCE2-213ENST00000523824 CARMIL1Q5VZK9 1371 aa13.94□□□□□ -0.18
NSMCE2-213ENST00000523824 TNIKQ9UKE5 1360 aa13.94□□□□□ -0.18
NSMCE2-213ENST00000523824 ABCC2Q92887 1545 aa13.9□□□□□ -0.18
NSMCE2-213ENST00000523824 PLB1Q6P1J6 1458 aa13.9□□□□□ -0.18
NSMCE2-213ENST00000523824 ASXL2Q76L83 1435 aa13.9□□□□□ -0.19
NSMCE2-213ENST00000523824 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
NSMCE2-213ENST00000523824 UACAQ9BZF9 1416 aa13.86□□□□□ -0.19
NSMCE2-213ENST00000523824 GLI2P10070 1586 aa13.85□□□□□ -0.19
NSMCE2-213ENST00000523824 UHRF1BP1LA0JNW5 1464 aa13.85□□□□□ -0.19
NSMCE2-213ENST00000523824 IQGAP2Q13576 1575 aa13.84□□□□□ -0.19
NSMCE2-213ENST00000523824 ADGRL1O94910 1474 aa13.81□□□□□ -0.2
NSMCE2-213ENST00000523824 EPRSP07814 1512 aaKnown RBP13.8□□□□□ -0.2
NSMCE2-213ENST00000523824 DISP1Q96F81 1524 aa13.8□□□□□ -0.2
NSMCE2-213ENST00000523824 PPRC1Q5VV67 1664 aaKnown RBP13.79□□□□□ -0.2
NSMCE2-213ENST00000523824 FOXD1Q16676 465 aa13.79□□□□□ -0.2
NSMCE2-213ENST00000523824 COL17A1Q9UMD9 1497 aaPredicted RBP13.79□□□□□ -0.2
NSMCE2-213ENST00000523824 TEX14Q8IWB6 1497 aa13.78□□□□□ -0.2
NSMCE2-213ENST00000523824 KDM5BQ9UGL1 1544 aa13.78□□□□□ -0.2
NSMCE2-213ENST00000523824 RAPGEF2Q9Y4G8 1499 aa13.75□□□□□ -0.21
NSMCE2-213ENST00000523824 UGGT2Q9NYU1 1516 aa13.74□□□□□ -0.21
NSMCE2-213ENST00000523824 MAP3K4Q9Y6R4 1608 aa13.74□□□□□ -0.21
NSMCE2-213ENST00000523824 ZCCHC11Q5TAX3 1644 aaKnown RBP13.73□□□□□ -0.21
NSMCE2-213ENST00000523824 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
NSMCE2-213ENST00000523824 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
NSMCE2-213ENST00000523824 KIAA0556O60303 1618 aa13.71□□□□□ -0.22
NSMCE2-213ENST00000523824 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
NSMCE2-213ENST00000523824 HECW2Q9P2P5 1572 aa13.68□□□□□ -0.22
NSMCE2-213ENST00000523824 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
NSMCE2-213ENST00000523824 GOLGA3Q08378 1498 aa13.65□□□□□ -0.22
NSMCE2-213ENST00000523824 MAGI3Q5TCQ9 1506 aa13.64□□□□□ -0.23
NSMCE2-213ENST00000523824 CFAP43Q8NDM7 1665 aa13.61□□□□□ -0.23
NSMCE2-213ENST00000523824 ABCA8O94911 1581 aa13.61□□□□□ -0.23
NSMCE2-213ENST00000523824 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
NSMCE2-213ENST00000523824 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
NSMCE2-213ENST00000523824 CTTNBP2Q8WZ74 1663 aa13.58□□□□□ -0.24
NSMCE2-213ENST00000523824 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
NSMCE2-213ENST00000523824 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
NSMCE2-213ENST00000523824 KIF21BO75037 1637 aa13.53□□□□□ -0.24
NSMCE2-213ENST00000523824 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
NSMCE2-213ENST00000523824 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
NSMCE2-213ENST00000523824 ATP10BO94823 1461 aa13.53□□□□□ -0.24
NSMCE2-213ENST00000523824 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
NSMCE2-213ENST00000523824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
NSMCE2-213ENST00000523824 RAPGEF3O95398 923 aa13.52□□□□□ -0.25
NSMCE2-213ENST00000523824 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
NSMCE2-213ENST00000523824 ARID4BQ4LE39 1312 aaPredicted RBP13.5□□□□□ -0.25
NSMCE2-213ENST00000523824 PTPRMP28827 1452 aa13.49□□□□□ -0.25
NSMCE2-213ENST00000523824 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.25
NSMCE2-213ENST00000523824 NEO1Q92859 1461 aa13.46□□□□□ -0.25
NSMCE2-213ENST00000523824 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
NSMCE2-213ENST00000523824 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
NSMCE2-213ENST00000523824 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
NSMCE2-213ENST00000523824 PLEKHD1A6NEE1 506 aa13.42□□□□□ -0.26
NSMCE2-213ENST00000523824 RAPGEF6Q8TEU7 1601 aa13.41□□□□□ -0.26
NSMCE2-213ENST00000523824 BCORL1Q5H9F3 1711 aa13.39□□□□□ -0.27
NSMCE2-213ENST00000523824 SAMD9Q5K651 1589 aa13.39□□□□□ -0.27
NSMCE2-213ENST00000523824 MADDQ8WXG6 1647 aa13.39□□□□□ -0.27
NSMCE2-213ENST00000523824 PCF11O94913 1555 aaKnown RBP13.38□□□□□ -0.27
NSMCE2-213ENST00000523824 DENND4BO75064 1496 aaPredicted RBP13.38□□□□□ -0.27
NSMCE2-213ENST00000523824 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
NSMCE2-213ENST00000523824 NUP153P49790 1475 aaKnown RBP13.37□□□□□ -0.27
NSMCE2-213ENST00000523824 AKNAQ7Z591 1439 aa13.37□□□□□ -0.27
NSMCE2-213ENST00000523824 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
NSMCE2-213ENST00000523824 HSPA2P54652 639 aa13.35□□□□□ -0.27
NSMCE2-213ENST00000523824 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
NSMCE2-213ENST00000523824 POGZQ7Z3K3 1410 aa13.35□□□□□ -0.27
NSMCE2-213ENST00000523824 FANCAO15360 1455 aa13.34□□□□□ -0.27
NSMCE2-213ENST00000523824 ARHGEF40Q8TER5 1519 aa13.34□□□□□ -0.27
NSMCE2-213ENST00000523824 MLECQ14165 292 aa13.33□□□□□ -0.28
NSMCE2-213ENST00000523824 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
NSMCE2-213ENST00000523824 CFAP74Q9C0B2 1584 aa13.31□□□□□ -0.28
NSMCE2-213ENST00000523824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.3□□□□□ -0.28
NSMCE2-213ENST00000523824 RICTORQ6R327 1708 aa13.3□□□□□ -0.28
NSMCE2-213ENST00000523824 EEA1Q15075 1411 aa13.29□□□□□ -0.28
NSMCE2-213ENST00000523824 YEATS2Q9ULM3 1422 aa13.29□□□□□ -0.28
NSMCE2-213ENST00000523824 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
NSMCE2-213ENST00000523824 CERKQ8TCT0 537 aa13.28□□□□□ -0.28
NSMCE2-213ENST00000523824 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
NSMCE2-213ENST00000523824 EFCAB5A4FU69 1503 aa13.28□□□□□ -0.28
NSMCE2-213ENST00000523824 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms