RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
SQLE-206ENST00000523430 FHAD1B1AJZ9 1412 aa32.46■■■□□ 2.79
SQLE-206ENST00000523430 TTBK1Q5TCY1 1321 aaPredicted RBP32.38■■■□□ 2.77
SQLE-206ENST00000523430 SNAPC4Q5SXM2 1469 aa32.38■■■□□ 2.77
SQLE-206ENST00000523430 EFCAB5A4FU69 1503 aa32.33■■■□□ 2.77
SQLE-206ENST00000523430 MAGI1Q96QZ7 1491 aaPredicted RBP32.25■■■□□ 2.75
SQLE-206ENST00000523430 FHOD3Q2V2M9 1422 aa32.23■■■□□ 2.75
SQLE-206ENST00000523430 SAMD9Q5K651 1589 aa32.22■■■□□ 2.75
SQLE-206ENST00000523430 APLP2Q06481 763 aa32.22■■■□□ 2.75
SQLE-206ENST00000523430 P3H3Q8IVL6 736 aa32.2■■■□□ 2.74
SQLE-206ENST00000523430 GRIN2AQ12879 1464 aa32.19■■■□□ 2.74
SQLE-206ENST00000523430 IQGAP2Q13576 1575 aa32.18■■■□□ 2.74
SQLE-206ENST00000523430 PCF11O94913 1555 aaKnown RBP32.15■■■□□ 2.74
SQLE-206ENST00000523430 SYNJ2O15056 1496 aa32.14■■■□□ 2.74
SQLE-206ENST00000523430 TIAM1Q13009 1591 aa32.03■■■□□ 2.72
SQLE-206ENST00000523430 CEP170Q5SW79 1584 aa32.03■■■□□ 2.72
SQLE-206ENST00000523430 KANK4Q5T7N3 995 aaPredicted RBP32.03■■■□□ 2.72
SQLE-206ENST00000523430 KIAA0586Q9BVV6 1533 aa32.02■■■□□ 2.72
SQLE-206ENST00000523430 FYCO1Q9BQS8 1478 aa32.01■■■□□ 2.72
SQLE-206ENST00000523430 CHMP7Q8WUX9 453 aaPredicted RBP32■■■□□ 2.71
SQLE-206ENST00000523430 FMN1Q68DA7 1419 aa32■■■□□ 2.71
SQLE-206ENST00000523430 UGGT2Q9NYU1 1516 aa32■■■□□ 2.71
SQLE-206ENST00000523430 CFAP43Q8NDM7 1665 aa31.99■■■□□ 2.71
SQLE-206ENST00000523430 MAP3K1Q13233 1512 aa31.99■■■□□ 2.71
SQLE-206ENST00000523430 CASKIN1Q8WXD9 1431 aa31.98■■■□□ 2.71
SQLE-206ENST00000523430 FBLN2P98095 1184 aa31.95■■■□□ 2.7
SQLE-206ENST00000523430 HRCP23327 699 aa31.93■■■□□ 2.7
SQLE-206ENST00000523430 NUP160Q12769 1436 aa31.92■■■□□ 2.7
SQLE-206ENST00000523430 KIAA0556O60303 1618 aa31.88■■■□□ 2.69
SQLE-206ENST00000523430 DISP1Q96F81 1524 aa31.86■■■□□ 2.69
SQLE-206ENST00000523430 LRRC9Q6ZRR7 1453 aa31.86■■■□□ 2.69
SQLE-206ENST00000523430 ATP1B4Q9UN42 357 aaPredicted RBP31.85■■■□□ 2.69
SQLE-206ENST00000523430 LRRIQ1Q96JM4 1722 aa31.84■■■□□ 2.69
SQLE-206ENST00000523430 CHD1O14646 1710 aa31.82■■■□□ 2.68
SQLE-206ENST00000523430 HECW1Q76N89 1606 aa31.72■■■□□ 2.67
SQLE-206ENST00000523430 RRBP1Q9P2E9 1410 aaKnown RBP31.69■■■□□ 2.66
SQLE-206ENST00000523430 CCDC18Q5T9S5 1454 aa31.62■■■□□ 2.65
SQLE-206ENST00000523430 JPH4Q96JJ6 628 aa31.62■■■□□ 2.65
SQLE-206ENST00000523430 PHLDB1Q86UU1 1377 aa31.6■■■□□ 2.65
SQLE-206ENST00000523430 HNRNPUL2Q1KMD3 747 aaKnown RBP31.6■■■□□ 2.65
SQLE-206ENST00000523430 CARMIL2Q6F5E8 1435 aa31.58■■■□□ 2.65
SQLE-206ENST00000523430 EPRSP07814 1512 aaKnown RBP31.58■■■□□ 2.65
SQLE-206ENST00000523430 CCNB3Q8WWL7 1395 aa31.57■■■□□ 2.64
SQLE-206ENST00000523430 RAPGEF6Q8TEU7 1601 aa31.57■■■□□ 2.64
SQLE-206ENST00000523430 CDK13Q14004 1512 aaKnown RBP31.56■■■□□ 2.64
SQLE-206ENST00000523430 MAGI3Q5TCQ9 1506 aa31.55■■■□□ 2.64
SQLE-206ENST00000523430 EHBP1L1Q8N3D4 1523 aa31.55■■■□□ 2.64
SQLE-206ENST00000523430 MTUS2Q5JR59 1369 aa31.55■■■□□ 2.64
SQLE-206ENST00000523430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.52■■■□□ 2.64
SQLE-206ENST00000523430 NUP153P49790 1475 aaKnown RBP31.51■■■□□ 2.64
SQLE-206ENST00000523430 SHROOM2Q13796 1616 aa31.49■■■□□ 2.63
SQLE-206ENST00000523430 PRG4Q92954 1404 aaPredicted RBP31.47■■■□□ 2.63
SQLE-206ENST00000523430 PLB1Q6P1J6 1458 aa31.47■■■□□ 2.63
SQLE-206ENST00000523430 SUPT6HQ7KZ85 1726 aaKnown RBP31.46■■■□□ 2.63
SQLE-206ENST00000523430 ARID3CA6NKF2 412 aa31.45■■■□□ 2.63
SQLE-206ENST00000523430 NCOA2Q15596 1464 aa31.44■■■□□ 2.62
SQLE-206ENST00000523430 CLASP1Q7Z460 1538 aa31.42■■■□□ 2.62
SQLE-206ENST00000523430 ARHGEF11O15085 1522 aa31.38■■■□□ 2.61
SQLE-206ENST00000523430 CCER1Q8TC90 406 aaPredicted RBP31.38■■■□□ 2.61
SQLE-206ENST00000523430 ABCA8O94911 1581 aa31.37■■■□□ 2.61
SQLE-206ENST00000523430 ZEB1P37275 1124 aaPredicted RBP31.35■■■□□ 2.61
SQLE-206ENST00000523430 FGD6Q6ZV73 1430 aa31.33■■■□□ 2.61
SQLE-206ENST00000523430 ERCC6L2Q5T890 1561 aa31.33■■■□□ 2.61
SQLE-206ENST00000523430 MYOM3Q5VTT5 1437 aa31.3■■■□□ 2.6
SQLE-206ENST00000523430 ITGAEP38570 1179 aa31.29■■■□□ 2.6
SQLE-206ENST00000523430 FAM50AQ14320 339 aaKnown RBP31.28■■■□□ 2.6
SQLE-206ENST00000523430 PTPRGP23470 1445 aa31.26■■■□□ 2.59
SQLE-206ENST00000523430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.23■■■□□ 2.598e-9■■■□□ 18.5
SQLE-206ENST00000523430 PTPN23Q9H3S7 1636 aa31.18■■■□□ 2.58
SQLE-206ENST00000523430 TROQ12816 1431 aaPredicted RBP31.16■■■□□ 2.58
SQLE-206ENST00000523430 ATP10BO94823 1461 aa31.15■■■□□ 2.58
SQLE-206ENST00000523430 CDK11AQ9UQ88 783 aaPredicted RBP31.14■■■□□ 2.58
SQLE-206ENST00000523430 ADCY10Q96PN6 1610 aa31.13■■■□□ 2.57
SQLE-206ENST00000523430 KIF14Q15058 1648 aa31.12■■■□□ 2.57
SQLE-206ENST00000523430 UACAQ9BZF9 1416 aa31.11■■■□□ 2.57
SQLE-206ENST00000523430 TCOF1Q13428 1488 aaKnown RBP31.1■■■□□ 2.57
SQLE-206ENST00000523430 MIA2Q96PC5 1412 aa31.05■■■□□ 2.56
SQLE-206ENST00000523430 ABCC2Q92887 1545 aa31.05■■■□□ 2.56
SQLE-206ENST00000523430 PTPRKQ15262 1439 aa31.03■■■□□ 2.56
SQLE-206ENST00000523430 RAB3GAP2Q9H2M9 1393 aa31.03■■■□□ 2.56
SQLE-206ENST00000523430 DHX57Q6P158 1386 aaKnown RBP31■■■□□ 2.55
SQLE-206ENST00000523430 SETD5Q9C0A6 1442 aa31■■■□□ 2.55
SQLE-206ENST00000523430 ITSN2Q9NZM3 1697 aa30.98■■■□□ 2.55
SQLE-206ENST00000523430 PLEKHD1A6NEE1 506 aa30.95■■■□□ 2.54
SQLE-206ENST00000523430 GPATCH8Q9UKJ3 1502 aaKnown RBP30.93■■■□□ 2.54
SQLE-206ENST00000523430 ABCC10Q5T3U5 1492 aa30.92■■■□□ 2.54
SQLE-206ENST00000523430 UHRF1BP1LA0JNW5 1464 aa30.9■■■□□ 2.54
SQLE-206ENST00000523430 OSCARQ8IYS5 282 aa30.89■■■□□ 2.53
SQLE-206ENST00000523430 CDC42BPAQ5VT25 1732 aa30.88■■■□□ 2.53
SQLE-206ENST00000523430 HFM1A2PYH4 1435 aa30.87■■■□□ 2.53
SQLE-206ENST00000523430 ZCCHC11Q5TAX3 1644 aaKnown RBP30.87■■■□□ 2.53
SQLE-206ENST00000523430 CAMSAP2Q08AD1 1489 aa30.85■■■□□ 2.53
SQLE-206ENST00000523430 ZNF644Q9H582 1327 aaPredicted RBP30.85■■■□□ 2.53
SQLE-206ENST00000523430 DNMT1P26358 1616 aaKnown RBP30.84■■■□□ 2.53
SQLE-206ENST00000523430 KDM5BQ9UGL1 1544 aa30.81■■■□□ 2.52
SQLE-206ENST00000523430 DAPK1P53355 1430 aa30.8■■■□□ 2.52
SQLE-206ENST00000523430 NAIPQ13075 1403 aa30.8■■■□□ 2.52
SQLE-206ENST00000523430 CFDP1Q9UEE9 299 aaPredicted RBP30.8■■■□□ 2.52
SQLE-206ENST00000523430 GCC2Q8IWJ2 1684 aa30.79■■■□□ 2.52
SQLE-206ENST00000523430 CLSPNQ9HAW4 1339 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms