RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 NPM1P06748 294 aaKnown RBP eCLIP45.71■■■■■ 4.91
PVT1-219ENST00000523427 KIF13AQ9H1H9 1805 aa45.67■■■■■ 4.9
PVT1-219ENST00000523427 FAM69CQ0P6D2 419 aa45.65■■■■■ 4.9
PVT1-219ENST00000523427 IGF1RP08069 1367 aa45.58■■■■■ 4.89
PVT1-219ENST00000523427 KIF27Q86VH2 1401 aa45.54■■■■■ 4.88
PVT1-219ENST00000523427 KIAA0586Q9BVV6 1533 aa45.5■■■■■ 4.87
PVT1-219ENST00000523427 ABCC10Q5T3U5 1492 aa45.49■■■■■ 4.87
PVT1-219ENST00000523427 TTBK1Q5TCY1 1321 aaPredicted RBP45.47■■■■■ 4.87
PVT1-219ENST00000523427 ADCY10Q96PN6 1610 aa45.44■■■■■ 4.87
PVT1-219ENST00000523427 MAPKBP1O60336 1514 aa45.39■■■■■ 4.86
PVT1-219ENST00000523427 CUL7Q14999 1698 aa45.37■■■■■ 4.85
PVT1-219ENST00000523427 DIP2BQ9P265 1576 aa45.33■■■■■ 4.85
PVT1-219ENST00000523427 CARMIL1Q5VZK9 1371 aa45.3■■■■■ 4.84
PVT1-219ENST00000523427 PTPRGP23470 1445 aa45.26■■■■■ 4.84
PVT1-219ENST00000523427 TSPOAP1O95153 1857 aa45.15■■■■■ 4.82
PVT1-219ENST00000523427 CARMIL2Q6F5E8 1435 aa45.12■■■■■ 4.81
PVT1-219ENST00000523427 TNIKQ9UKE5 1360 aa45.09■■■■■ 4.81
PVT1-219ENST00000523427 KDM6BO15054 1643 aa45.09■■■■■ 4.81
PVT1-219ENST00000523427 IQGAP2Q13576 1575 aa45■■■■■ 4.79
PVT1-219ENST00000523427 ABCC2Q92887 1545 aa44.97■■■■■ 4.79
PVT1-219ENST00000523427 KDM4FA0A1W2PPD8 638 aa44.93■■■■■ 4.78
PVT1-219ENST00000523427 ASXL2Q76L83 1435 aa44.92■■■■■ 4.78
PVT1-219ENST00000523427 UACAQ9BZF9 1416 aa44.85■■■■■ 4.77
PVT1-219ENST00000523427 PLB1Q6P1J6 1458 aa44.85■■■■■ 4.77
PVT1-219ENST00000523427 DISP1Q96F81 1524 aa44.83■■■■■ 4.77
PVT1-219ENST00000523427 UHRF1BP1LA0JNW5 1464 aa44.79■■■■■ 4.76
PVT1-219ENST00000523427 RAPGEF2Q9Y4G8 1499 aa44.78■■■■■ 4.76
PVT1-219ENST00000523427 GLI2P10070 1586 aa44.7■■■■■ 4.75
PVT1-219ENST00000523427 UGGT2Q9NYU1 1516 aa44.66■■■■■ 4.74
PVT1-219ENST00000523427 PPRC1Q5VV67 1664 aaKnown RBP44.65■■■■■ 4.74
PVT1-219ENST00000523427 KDM5BQ9UGL1 1544 aa44.62■■■■■ 4.73
PVT1-219ENST00000523427 EPRSP07814 1512 aaKnown RBP44.6■■■■■ 4.73
PVT1-219ENST00000523427 KIAA0556O60303 1618 aa44.59■■■■■ 4.73
PVT1-219ENST00000523427 ZCCHC11Q5TAX3 1644 aaKnown RBP44.54■■■■■ 4.72
PVT1-219ENST00000523427 COL17A1Q9UMD9 1497 aaPredicted RBP44.52■■■■■ 4.72
PVT1-219ENST00000523427 MAP3K4Q9Y6R4 1608 aa44.46■■■■■ 4.71
PVT1-219ENST00000523427 TEX14Q8IWB6 1497 aa44.43■■■■■ 4.7
PVT1-219ENST00000523427 ADGRL1O94910 1474 aa44.41■■■■■ 4.7
PVT1-219ENST00000523427 KCNH8Q96L42 1107 aa44.38■■■■■ 4.7
PVT1-219ENST00000523427 WDR7Q9Y4E6 1490 aa44.37■■■■■ 4.69
PVT1-219ENST00000523427 CTTNBP2Q8WZ74 1663 aa44.34■■■■■ 4.69
PVT1-219ENST00000523427 GOLGA3Q08378 1498 aa44.32■■■■■ 4.69
PVT1-219ENST00000523427 ARID3CA6NKF2 412 aa44.23■■■■■ 4.67
PVT1-219ENST00000523427 CD109Q6YHK3 1445 aa44.22■■■■■ 4.67
PVT1-219ENST00000523427 P3H3Q8IVL6 736 aa44.2■■■■■ 4.67
PVT1-219ENST00000523427 ABCA8O94911 1581 aa44.19■■■■■ 4.66
PVT1-219ENST00000523427 PRXQ9BXM0 1461 aa44.18■■■■■ 4.66
PVT1-219ENST00000523427 FAM9AQ8IZU1 332 aaPredicted RBP44.09■■■■■ 4.65
PVT1-219ENST00000523427 MAGI3Q5TCQ9 1506 aa44.08■■■■■ 4.65
PVT1-219ENST00000523427 CFAP43Q8NDM7 1665 aa44.05■■■■■ 4.64
PVT1-219ENST00000523427 ILDR1Q86SU0 546 aaPredicted RBP44.02■■■■■ 4.64
PVT1-219ENST00000523427 ATP10BO94823 1461 aa43.92■■■■■ 4.62
PVT1-219ENST00000523427 HECW2Q9P2P5 1572 aa43.9■■■■■ 4.62
PVT1-219ENST00000523427 CSRNP3Q8WYN3 585 aa43.89■■■■■ 4.62
PVT1-219ENST00000523427 RANGAP1P46060 587 aaPredicted RBP43.88■■■■■ 4.62
PVT1-219ENST00000523427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.87■■■■■ 4.61
PVT1-219ENST00000523427 HNRNPUL2Q1KMD3 747 aaKnown RBP43.87■■■■■ 4.61
PVT1-219ENST00000523427 KIF21BO75037 1637 aa43.78■■■■■ 4.6
PVT1-219ENST00000523427 ARAP3Q8WWN8 1544 aa43.74■■■■■ 4.59
PVT1-219ENST00000523427 RAPGEF3O95398 923 aa43.7■■■■■ 4.59
PVT1-219ENST00000523427 SAMD9Q5K651 1589 aa43.69■■■■■ 4.58
PVT1-219ENST00000523427 RAPGEF6Q8TEU7 1601 aa43.67■■■■■ 4.58
PVT1-219ENST00000523427 ABCA9Q8IUA7 1624 aa43.66■■■■■ 4.58
PVT1-219ENST00000523427 PHLDB1Q86UU1 1377 aa43.61■■■■■ 4.57
PVT1-219ENST00000523427 FHOD3Q2V2M9 1422 aa43.57■■■■■ 4.57
PVT1-219ENST00000523427 NUP153P49790 1475 aaKnown RBP43.54■■■■■ 4.56
PVT1-219ENST00000523427 NEO1Q92859 1461 aa43.51■■■■■ 4.56
PVT1-219ENST00000523427 ARID4BQ4LE39 1312 aaPredicted RBP43.51■■■■■ 4.56
PVT1-219ENST00000523427 PLEKHD1A6NEE1 506 aa43.48■■■■■ 4.55
PVT1-219ENST00000523427 EEA1Q15075 1411 aa43.45■■■■■ 4.55
PVT1-219ENST00000523427 PTPRMP28827 1452 aa43.42■■■■■ 4.54
PVT1-219ENST00000523427 ADAMTSL3P82987 1691 aa43.37■■■■■ 4.53
PVT1-219ENST00000523427 EHMT2Q96KQ7 1210 aa43.36■■■■■ 4.53
PVT1-219ENST00000523427 FRMPD1Q5SYB0 1578 aa43.36■■■■■ 4.53
PVT1-219ENST00000523427 DENND4BO75064 1496 aaPredicted RBP43.29■■■■■ 4.52
PVT1-219ENST00000523427 AKNAQ7Z591 1439 aa43.28■■■■■ 4.52
PVT1-219ENST00000523427 BCORL1Q5H9F3 1711 aa43.25■■■■■ 4.51
PVT1-219ENST00000523427 PLPPR3Q6T4P5 718 aa43.24■■■■■ 4.51
PVT1-219ENST00000523427 FANCAO15360 1455 aa43.24■■■■■ 4.51
PVT1-219ENST00000523427 MADDQ8WXG6 1647 aa43.23■■■■■ 4.51
PVT1-219ENST00000523427 ATP1B4Q9UN42 357 aaPredicted RBP43.21■■■■■ 4.51
PVT1-219ENST00000523427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.21■■■■■ 4.51
PVT1-219ENST00000523427 EFCAB5A4FU69 1503 aa43.18■■■■■ 4.5
PVT1-219ENST00000523427 CDK13Q14004 1512 aaKnown RBP43.15■■■■■ 4.5
PVT1-219ENST00000523427 ARHGEF40Q8TER5 1519 aa43.15■■■■■ 4.5
PVT1-219ENST00000523427 TTC37Q6PGP7 1564 aa43.15■■■■■ 4.5
PVT1-219ENST00000523427 UBTFP17480 764 aaKnown RBP43.14■■■■■ 4.5
PVT1-219ENST00000523427 RICTORQ6R327 1708 aa43.14■■■■■ 4.5
PVT1-219ENST00000523427 CFAP74Q9C0B2 1584 aa43.1■■■■■ 4.49
PVT1-219ENST00000523427 FBXO41Q8TF61 875 aa43.08■■■■■ 4.49
PVT1-219ENST00000523427 RIMS1Q86UR5 1692 aaKnown RBP43.08■■■■■ 4.49
PVT1-219ENST00000523427 MLECQ14165 292 aa43.07■■■■■ 4.49
PVT1-219ENST00000523427 YEATS2Q9ULM3 1422 aa43.05■■■■■ 4.48
PVT1-219ENST00000523427 PCF11O94913 1555 aaKnown RBP43.05■■■■■ 4.48
PVT1-219ENST00000523427 LMTK3Q96Q04 1460 aa43.01■■■■■ 4.48
PVT1-219ENST00000523427 POGZQ7Z3K3 1410 aa43.01■■■■■ 4.48
PVT1-219ENST00000523427 ZFYVE16Q7Z3T8 1539 aa43.01■■■■■ 4.48
PVT1-219ENST00000523427 HSPA2P54652 639 aa42.99■■■■■ 4.47
PVT1-219ENST00000523427 SCAPERQ9BY12 1400 aa42.98■■■■■ 4.47
PVT1-219ENST00000523427 ZMYM4Q5VZL5 1548 aa42.97■■■■■ 4.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms