RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
EXTL3-214ENST00000523271 NOC3LQ8WTT2 800 aaKnown RBP16.16■□□□□ 0.18
EXTL3-214ENST00000523271 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
EXTL3-214ENST00000523271 CALRP27797 417 aaKnown RBP16.14■□□□□ 0.17
EXTL3-214ENST00000523271 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
EXTL3-214ENST00000523271 USP35Q9P2H5 1018 aa16.12■□□□□ 0.17
EXTL3-214ENST00000523271 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
EXTL3-214ENST00000523271 TPRNQ4KMQ1 711 aa16.11■□□□□ 0.17
EXTL3-214ENST00000523271 CLSTN1O94985 981 aa16.11■□□□□ 0.17
EXTL3-214ENST00000523271 FBLN2P98095 1184 aa16.09■□□□□ 0.17
EXTL3-214ENST00000523271 DRC7Q8IY82 874 aa16.08■□□□□ 0.16
EXTL3-214ENST00000523271 GOLGA6L4A6NEF3 574 aa16.08■□□□□ 0.16
EXTL3-214ENST00000523271 FGD1P98174 961 aa16.07■□□□□ 0.16
EXTL3-214ENST00000523271 GOLGA6L1Q8N7Z2 621 aa16.07■□□□□ 0.16
EXTL3-214ENST00000523271 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
EXTL3-214ENST00000523271 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
EXTL3-214ENST00000523271 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
EXTL3-214ENST00000523271 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
EXTL3-214ENST00000523271 PRM3Q9NNZ6 103 aa16.04■□□□□ 0.16
EXTL3-214ENST00000523271 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
EXTL3-214ENST00000523271 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
EXTL3-214ENST00000523271 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.16
EXTL3-214ENST00000523271 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
EXTL3-214ENST00000523271 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
EXTL3-214ENST00000523271 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
EXTL3-214ENST00000523271 GOLGA2Q08379 1002 aa15.97■□□□□ 0.15
EXTL3-214ENST00000523271 KCNJ4P48050 445 aa15.97■□□□□ 0.15
EXTL3-214ENST00000523271 NPHP1O15259 732 aa15.96■□□□□ 0.15
EXTL3-214ENST00000523271 PTMSP20962 102 aa15.96■□□□□ 0.15
EXTL3-214ENST00000523271 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
EXTL3-214ENST00000523271 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
EXTL3-214ENST00000523271 CFAP44Q96MT7 982 aa15.93■□□□□ 0.14
EXTL3-214ENST00000523271 TAOK2Q9UL54 1235 aa15.93■□□□□ 0.14
EXTL3-214ENST00000523271 NOP58Q9Y2X3 529 aaKnown RBP15.92■□□□□ 0.14
EXTL3-214ENST00000523271 MCCP23508 829 aa15.92■□□□□ 0.14
EXTL3-214ENST00000523271 HSCBQ8IWL3 235 aa15.92■□□□□ 0.14
EXTL3-214ENST00000523271 CFAP53Q96M91 514 aa15.92■□□□□ 0.14
EXTL3-214ENST00000523271 C14orf37Q86TY3 774 aa15.91■□□□□ 0.14
EXTL3-214ENST00000523271 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
EXTL3-214ENST00000523271 GNL2Q13823 731 aaKnown RBP15.9■□□□□ 0.14
EXTL3-214ENST00000523271 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
EXTL3-214ENST00000523271 OS9Q13438 667 aaPredicted RBP15.89■□□□□ 0.13
EXTL3-214ENST00000523271 MS4A1P11836 297 aa15.88■□□□□ 0.13
EXTL3-214ENST00000523271 TPM4P67936 248 aa15.87■□□□□ 0.13
EXTL3-214ENST00000523271 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
EXTL3-214ENST00000523271 HAP1P54257 671 aaPredicted RBP15.86■□□□□ 0.13
EXTL3-214ENST00000523271 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
EXTL3-214ENST00000523271 CCDC34Q96HJ3 373 aa15.84■□□□□ 0.13
EXTL3-214ENST00000523271 HTATSF1O43719 755 aaKnown RBP15.83■□□□□ 0.13
EXTL3-214ENST00000523271 SYAP1Q96A49 352 aaPredicted RBP15.83■□□□□ 0.12
EXTL3-214ENST00000523271 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
EXTL3-214ENST00000523271 EIF4G2P78344 907 aaKnown RBP eCLIP15.8■□□□□ 0.12
EXTL3-214ENST00000523271 ARID4BQ4LE39 1312 aaPredicted RBP15.8■□□□□ 0.12
EXTL3-214ENST00000523271 CDCA8Q53HL2 280 aa15.79■□□□□ 0.12
EXTL3-214ENST00000523271 CEP89Q96ST8 783 aa15.79■□□□□ 0.12
EXTL3-214ENST00000523271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.12
EXTL3-214ENST00000523271 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
EXTL3-214ENST00000523271 GBP4Q96PP9 640 aa15.78■□□□□ 0.12
EXTL3-214ENST00000523271 MAPK8IP3Q9UPT6 1336 aa15.77■□□□□ 0.12
EXTL3-214ENST00000523271 KDM2AQ9Y2K7 1162 aa15.77■□□□□ 0.11
EXTL3-214ENST00000523271 ISY1Q9ULR0 285 aaKnown RBP15.76■□□□□ 0.11
EXTL3-214ENST00000523271 PPP1R15AO75807 674 aaPredicted RBP15.75■□□□□ 0.11
EXTL3-214ENST00000523271 KNSTRNQ9Y448 316 aa15.74■□□□□ 0.11
EXTL3-214ENST00000523271 RGS3P49796 1198 aa15.73■□□□□ 0.11
EXTL3-214ENST00000523271 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
EXTL3-214ENST00000523271 ARID3AQ99856 593 aa15.73■□□□□ 0.11
EXTL3-214ENST00000523271 TPM3P06753 285 aa15.71■□□□□ 0.11
EXTL3-214ENST00000523271 NUDCQ9Y266 331 aa15.71■□□□□ 0.11
EXTL3-214ENST00000523271 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
EXTL3-214ENST00000523271 KIAA1211Q6ZU35 1233 aa15.71■□□□□ 0.1
EXTL3-214ENST00000523271 PLEKHG5O94827 1062 aa15.71■□□□□ 0.1
EXTL3-214ENST00000523271 DEKP35659 375 aaKnown RBP15.7■□□□□ 0.1
EXTL3-214ENST00000523271 GPS2Q13227 327 aa15.7■□□□□ 0.1
EXTL3-214ENST00000523271 CSPP1Q1MSJ5 1256 aa15.7■□□□□ 0.1
EXTL3-214ENST00000523271 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
EXTL3-214ENST00000523271 EEA1Q15075 1411 aa15.69■□□□□ 0.1
EXTL3-214ENST00000523271 TSPY4P0CV99 314 aa15.69■□□□□ 0.1
EXTL3-214ENST00000523271 TSPY10P0CW01 314 aa15.69■□□□□ 0.1
EXTL3-214ENST00000523271 PHF14O94880 888 aa15.68■□□□□ 0.1
EXTL3-214ENST00000523271 CCDC70Q6NSX1 233 aa15.68■□□□□ 0.1
EXTL3-214ENST00000523271 KRI1Q8N9T8 703 aaKnown RBP15.66■□□□□ 0.1
EXTL3-214ENST00000523271 FRAT1Q92837 279 aaPredicted RBP15.64■□□□□ 0.09
EXTL3-214ENST00000523271 PDE4CQ08493 712 aa15.64■□□□□ 0.09
EXTL3-214ENST00000523271 HSP90AA2PQ14568 343 aaPredicted RBP15.64■□□□□ 0.09
EXTL3-214ENST00000523271 SUPT16HQ9Y5B9 1047 aaKnown RBP15.63■□□□□ 0.09
EXTL3-214ENST00000523271 TSR1Q2NL82 804 aaKnown RBP15.62■□□□□ 0.09
EXTL3-214ENST00000523271 GOLGA6L3A6NEY3 463 aa15.6■□□□□ 0.09
EXTL3-214ENST00000523271 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
EXTL3-214ENST00000523271 MIER1Q8N108 512 aa15.58■□□□□ 0.08
EXTL3-214ENST00000523271 HMMRO75330 724 aa15.58■□□□□ 0.08
EXTL3-214ENST00000523271 TEX35Q5T0J7 233 aa15.58■□□□□ 0.08
EXTL3-214ENST00000523271 NOM1Q5C9Z4 860 aaKnown RBP15.58■□□□□ 0.08
EXTL3-214ENST00000523271 RASSF8Q8NHQ8 419 aa15.58■□□□□ 0.08
EXTL3-214ENST00000523271 SPRYD3Q8NCJ5 442 aa15.57■□□□□ 0.08
EXTL3-214ENST00000523271 TMX4Q9H1E5 349 aaPredicted RBP15.57■□□□□ 0.08
EXTL3-214ENST00000523271 CHIC2Q9UKJ5 165 aa15.57■□□□□ 0.08
EXTL3-214ENST00000523271 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.56■□□□□ 0.08
EXTL3-214ENST00000523271 HSP90B1P14625 803 aaKnown RBP15.55■□□□□ 0.08
EXTL3-214ENST00000523271 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
EXTL3-214ENST00000523271 CALD1Q05682 793 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms