RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 APLP2Q06481 763 aa26.03■■□□□ 1.76
SREK1-212ENST00000522912 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
SREK1-212ENST00000522912 ADAMTS12P58397 1594 aa25.96■■□□□ 1.75
SREK1-212ENST00000522912 FHAD1B1AJZ9 1412 aa25.95■■□□□ 1.75
SREK1-212ENST00000522912 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
SREK1-212ENST00000522912 EFCAB5A4FU69 1503 aa25.92■■□□□ 1.74
SREK1-212ENST00000522912 P3H3Q8IVL6 736 aa25.88■■□□□ 1.73
SREK1-212ENST00000522912 FHOD3Q2V2M9 1422 aa25.86■■□□□ 1.73
SREK1-212ENST00000522912 KANK4Q5T7N3 995 aaPredicted RBP25.85■■□□□ 1.73
SREK1-212ENST00000522912 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
SREK1-212ENST00000522912 SAMD9Q5K651 1589 aa25.82■■□□□ 1.72
SREK1-212ENST00000522912 PCF11O94913 1555 aaKnown RBP25.79■■□□□ 1.72
SREK1-212ENST00000522912 MAP3K1Q13233 1512 aa25.77■■□□□ 1.72
SREK1-212ENST00000522912 TIAM1Q13009 1591 aa25.77■■□□□ 1.72
SREK1-212ENST00000522912 IQGAP2Q13576 1575 aa25.73■■□□□ 1.71
SREK1-212ENST00000522912 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
SREK1-212ENST00000522912 CASKIN1Q8WXD9 1431 aa25.7■■□□□ 1.7
SREK1-212ENST00000522912 FYCO1Q9BQS8 1478 aa25.7■■□□□ 1.7
SREK1-212ENST00000522912 GRIN2AQ12879 1464 aa25.69■■□□□ 1.7
SREK1-212ENST00000522912 CFAP43Q8NDM7 1665 aa25.69■■□□□ 1.7
SREK1-212ENST00000522912 FMN1Q68DA7 1419 aa25.69■■□□□ 1.7
SREK1-212ENST00000522912 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.7
SREK1-212ENST00000522912 SYNJ2O15056 1496 aa25.63■■□□□ 1.69
SREK1-212ENST00000522912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.63■■□□□ 1.69
SREK1-212ENST00000522912 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
SREK1-212ENST00000522912 ATP1B4Q9UN42 357 aaPredicted RBP25.63■■□□□ 1.69
SREK1-212ENST00000522912 KIAA0586Q9BVV6 1533 aa25.62■■□□□ 1.69
SREK1-212ENST00000522912 UGGT2Q9NYU1 1516 aa25.61■■□□□ 1.69
SREK1-212ENST00000522912 HNRNPUL2Q1KMD3 747 aaKnown RBP25.6■■□□□ 1.69
SREK1-212ENST00000522912 RRBP1Q9P2E9 1410 aaKnown RBP25.58■■□□□ 1.69
SREK1-212ENST00000522912 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.68
SREK1-212ENST00000522912 LRRIQ1Q96JM4 1722 aa25.57■■□□□ 1.68
SREK1-212ENST00000522912 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
SREK1-212ENST00000522912 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
SREK1-212ENST00000522912 FBLN2P98095 1184 aa25.51■■□□□ 1.67
SREK1-212ENST00000522912 DISP1Q96F81 1524 aa25.49■■□□□ 1.67
SREK1-212ENST00000522912 NUP160Q12769 1436 aa25.48■■□□□ 1.67
SREK1-212ENST00000522912 KIAA0556O60303 1618 aa25.48■■□□□ 1.67
SREK1-212ENST00000522912 CCNB3Q8WWL7 1395 aa25.47■■□□□ 1.67
SREK1-212ENST00000522912 PHLDB1Q86UU1 1377 aa25.45■■□□□ 1.66
SREK1-212ENST00000522912 HECW1Q76N89 1606 aa25.41■■□□□ 1.66
SREK1-212ENST00000522912 CCDC18Q5T9S5 1454 aa25.36■■□□□ 1.65
SREK1-212ENST00000522912 MTUS2Q5JR59 1369 aa25.36■■□□□ 1.65
SREK1-212ENST00000522912 CHD1O14646 1710 aa25.34■■□□□ 1.65
SREK1-212ENST00000522912 EPRSP07814 1512 aaKnown RBP25.33■■□□□ 1.65
SREK1-212ENST00000522912 JPH4Q96JJ6 628 aa25.33■■□□□ 1.65
SREK1-212ENST00000522912 MAGI3Q5TCQ9 1506 aa25.32■■□□□ 1.64
SREK1-212ENST00000522912 EHBP1L1Q8N3D4 1523 aa25.3■■□□□ 1.64
SREK1-212ENST00000522912 CDK13Q14004 1512 aaKnown RBP25.29■■□□□ 1.64
SREK1-212ENST00000522912 SUPT6HQ7KZ85 1726 aaKnown RBP25.27■■□□□ 1.64
SREK1-212ENST00000522912 RAPGEF6Q8TEU7 1601 aa25.27■■□□□ 1.64
SREK1-212ENST00000522912 CARMIL2Q6F5E8 1435 aa25.26■■□□□ 1.63
SREK1-212ENST00000522912 NCOA2Q15596 1464 aa25.26■■□□□ 1.63
SREK1-212ENST00000522912 ITGAEP38570 1179 aa25.25■■□□□ 1.63
SREK1-212ENST00000522912 NUP153P49790 1475 aaKnown RBP25.23■■□□□ 1.63
SREK1-212ENST00000522912 FAM50AQ14320 339 aaKnown RBP25.23■■□□□ 1.63
SREK1-212ENST00000522912 FGD6Q6ZV73 1430 aa25.22■■□□□ 1.63
SREK1-212ENST00000522912 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
SREK1-212ENST00000522912 ARID3CA6NKF2 412 aa25.21■■□□□ 1.63
SREK1-212ENST00000522912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.2■■□□□ 1.62
SREK1-212ENST00000522912 PLB1Q6P1J6 1458 aa25.17■■□□□ 1.62
SREK1-212ENST00000522912 MYOM3Q5VTT5 1437 aa25.17■■□□□ 1.62
SREK1-212ENST00000522912 PRG4Q92954 1404 aaPredicted RBP25.13■■□□□ 1.61
SREK1-212ENST00000522912 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
SREK1-212ENST00000522912 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
SREK1-212ENST00000522912 ABCA8O94911 1581 aa25.09■■□□□ 1.61
SREK1-212ENST00000522912 PTPN23Q9H3S7 1636 aa25.08■■□□□ 1.6
SREK1-212ENST00000522912 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
SREK1-212ENST00000522912 SETD5Q9C0A6 1442 aa25.06■■□□□ 1.6
SREK1-212ENST00000522912 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
SREK1-212ENST00000522912 TCOF1Q13428 1488 aaKnown RBP25.01■■□□□ 1.59
SREK1-212ENST00000522912 PTPRGP23470 1445 aa25■■□□□ 1.59
SREK1-212ENST00000522912 PTPRKQ15262 1439 aa25■■□□□ 1.59
SREK1-212ENST00000522912 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
SREK1-212ENST00000522912 TROQ12816 1431 aaPredicted RBP24.99■■□□□ 1.59
SREK1-212ENST00000522912 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
SREK1-212ENST00000522912 MIA2Q96PC5 1412 aa24.97■■□□□ 1.59
SREK1-212ENST00000522912 ERCC6L2Q5T890 1561 aa24.97■■□□□ 1.59
SREK1-212ENST00000522912 ATP10BO94823 1461 aa24.96■■□□□ 1.59
SREK1-212ENST00000522912 ADCY10Q96PN6 1610 aa24.94■■□□□ 1.58
SREK1-212ENST00000522912 KIF14Q15058 1648 aa24.92■■□□□ 1.58
SREK1-212ENST00000522912 HFM1A2PYH4 1435 aa24.87■■□□□ 1.57
SREK1-212ENST00000522912 UACAQ9BZF9 1416 aa24.86■■□□□ 1.57
SREK1-212ENST00000522912 PLEKHD1A6NEE1 506 aa24.85■■□□□ 1.57
SREK1-212ENST00000522912 MAPKBP1O60336 1514 aa24.84■■□□□ 1.57
SREK1-212ENST00000522912 ITSN2Q9NZM3 1697 aa24.84■■□□□ 1.57
SREK1-212ENST00000522912 NAIPQ13075 1403 aa24.83■■□□□ 1.57
SREK1-212ENST00000522912 GPATCH8Q9UKJ3 1502 aaKnown RBP24.82■■□□□ 1.56
SREK1-212ENST00000522912 ZNF644Q9H582 1327 aaPredicted RBP24.8■■□□□ 1.56
SREK1-212ENST00000522912 ABCC10Q5T3U5 1492 aa24.79■■□□□ 1.56
SREK1-212ENST00000522912 ABCC2Q92887 1545 aa24.78■■□□□ 1.56
SREK1-212ENST00000522912 CHIC2Q9UKJ5 165 aa24.78■■□□□ 1.56
SREK1-212ENST00000522912 DNMT1P26358 1616 aaKnown RBP24.78■■□□□ 1.56
SREK1-212ENST00000522912 CDC42BPAQ5VT25 1732 aa24.77■■□□□ 1.56
SREK1-212ENST00000522912 GCC2Q8IWJ2 1684 aa24.76■■□□□ 1.55
SREK1-212ENST00000522912 DAPK1P53355 1430 aa24.75■■□□□ 1.55
SREK1-212ENST00000522912 CFDP1Q9UEE9 299 aaPredicted RBP24.75■■□□□ 1.55
SREK1-212ENST00000522912 RRP7BPQ9NSQ0 103 aa24.74■■□□□ 1.55
SREK1-212ENST00000522912 AKNAQ7Z591 1439 aa24.74■■□□□ 1.55
SREK1-212ENST00000522912 ABCC5O15440 1437 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms