RNA–Protein interactions for RNA: ENST00000522466.1

PDGFRB-210, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 296 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-210ENST00000522466 ILDR1Q86SU0 546 aaPredicted RBP14.63□□□□□ -0.07
PDGFRB-210ENST00000522466 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.07
PDGFRB-210ENST00000522466 TSPOAP1O95153 1857 aa14.62□□□□□ -0.07
PDGFRB-210ENST00000522466 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
PDGFRB-210ENST00000522466 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
PDGFRB-210ENST00000522466 ABCC10Q5T3U5 1492 aa14.6□□□□□ -0.07
PDGFRB-210ENST00000522466 DIP2BQ9P265 1576 aa14.57□□□□□ -0.08
PDGFRB-210ENST00000522466 KDM6BO15054 1643 aa14.57□□□□□ -0.08
PDGFRB-210ENST00000522466 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
PDGFRB-210ENST00000522466 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
PDGFRB-210ENST00000522466 ERICH3Q5RHP9 1530 aa14.55□□□□□ -0.08
PDGFRB-210ENST00000522466 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
PDGFRB-210ENST00000522466 ADCY10Q96PN6 1610 aa14.54□□□□□ -0.08
PDGFRB-210ENST00000522466 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
PDGFRB-210ENST00000522466 MAPKBP1O60336 1514 aa14.52□□□□□ -0.08
PDGFRB-210ENST00000522466 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
PDGFRB-210ENST00000522466 TTBK1Q5TCY1 1321 aaPredicted RBP14.51□□□□□ -0.09
PDGFRB-210ENST00000522466 ADGRL1O94910 1474 aa14.4□□□□□ -0.1
PDGFRB-210ENST00000522466 KIAA0586Q9BVV6 1533 aa14.37□□□□□ -0.11
PDGFRB-210ENST00000522466 PPRC1Q5VV67 1664 aaKnown RBP14.37□□□□□ -0.11
PDGFRB-210ENST00000522466 PTPRGP23470 1445 aa14.36□□□□□ -0.11
PDGFRB-210ENST00000522466 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
PDGFRB-210ENST00000522466 ASXL2Q76L83 1435 aa14.33□□□□□ -0.11
PDGFRB-210ENST00000522466 CUL7Q14999 1698 aa14.33□□□□□ -0.11
PDGFRB-210ENST00000522466 IGF1RP08069 1367 aa14.31□□□□□ -0.12
PDGFRB-210ENST00000522466 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
PDGFRB-210ENST00000522466 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
PDGFRB-210ENST00000522466 GLI2P10070 1586 aa14.29□□□□□ -0.12
PDGFRB-210ENST00000522466 PLB1Q6P1J6 1458 aa14.28□□□□□ -0.12
PDGFRB-210ENST00000522466 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
PDGFRB-210ENST00000522466 CARMIL2Q6F5E8 1435 aa14.25□□□□□ -0.13
PDGFRB-210ENST00000522466 KIF27Q86VH2 1401 aa14.25□□□□□ -0.13
PDGFRB-210ENST00000522466 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
PDGFRB-210ENST00000522466 UACAQ9BZF9 1416 aa14.23□□□□□ -0.13
PDGFRB-210ENST00000522466 MAP3K4Q9Y6R4 1608 aa14.23□□□□□ -0.13
PDGFRB-210ENST00000522466 CARMIL1Q5VZK9 1371 aa14.22□□□□□ -0.13
PDGFRB-210ENST00000522466 IQGAP2Q13576 1575 aa14.21□□□□□ -0.14
PDGFRB-210ENST00000522466 UHRF1BP1LA0JNW5 1464 aa14.2□□□□□ -0.14
PDGFRB-210ENST00000522466 ZCCHC11Q5TAX3 1644 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-210ENST00000522466 TEX14Q8IWB6 1497 aa14.18□□□□□ -0.14
PDGFRB-210ENST00000522466 DISP1Q96F81 1524 aa14.17□□□□□ -0.14
PDGFRB-210ENST00000522466 KDM5BQ9UGL1 1544 aa14.16□□□□□ -0.14
PDGFRB-210ENST00000522466 MSH5O43196 834 aa14.16□□□□□ -0.14
PDGFRB-210ENST00000522466 FBXO41Q8TF61 875 aa14.13□□□□□ -0.15
PDGFRB-210ENST00000522466 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
PDGFRB-210ENST00000522466 KIF21BO75037 1637 aa14.12□□□□□ -0.15
PDGFRB-210ENST00000522466 WDR7Q9Y4E6 1490 aa14.11□□□□□ -0.15
PDGFRB-210ENST00000522466 KIAA0556O60303 1618 aa14.09□□□□□ -0.15
PDGFRB-210ENST00000522466 CD109Q6YHK3 1445 aa14.08□□□□□ -0.15
PDGFRB-210ENST00000522466 UGGT2Q9NYU1 1516 aa14.07□□□□□ -0.16
PDGFRB-210ENST00000522466 CFAP43Q8NDM7 1665 aa14.06□□□□□ -0.16
PDGFRB-210ENST00000522466 ARID3CA6NKF2 412 aa14.04□□□□□ -0.16
PDGFRB-210ENST00000522466 MAGI3Q5TCQ9 1506 aa14.04□□□□□ -0.16
PDGFRB-210ENST00000522466 RAPGEF2Q9Y4G8 1499 aa14.02□□□□□ -0.16
PDGFRB-210ENST00000522466 PTPRMP28827 1452 aa13.99□□□□□ -0.17
PDGFRB-210ENST00000522466 ABCA8O94911 1581 aa13.97□□□□□ -0.17
PDGFRB-210ENST00000522466 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
PDGFRB-210ENST00000522466 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
PDGFRB-210ENST00000522466 ADAMTSL3P82987 1691 aa13.97□□□□□ -0.17
PDGFRB-210ENST00000522466 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
PDGFRB-210ENST00000522466 ARID4BQ4LE39 1312 aaPredicted RBP13.95□□□□□ -0.18
PDGFRB-210ENST00000522466 RAPGEF3O95398 923 aa13.95□□□□□ -0.18
PDGFRB-210ENST00000522466 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
PDGFRB-210ENST00000522466 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
PDGFRB-210ENST00000522466 ARAP3Q8WWN8 1544 aa13.93□□□□□ -0.18
PDGFRB-210ENST00000522466 BCORL1Q5H9F3 1711 aa13.92□□□□□ -0.18
PDGFRB-210ENST00000522466 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
PDGFRB-210ENST00000522466 PCF11O94913 1555 aaKnown RBP13.92□□□□□ -0.18
PDGFRB-210ENST00000522466 HSPA2P54652 639 aa13.91□□□□□ -0.18
PDGFRB-210ENST00000522466 LMTK3Q96Q04 1460 aa13.9□□□□□ -0.18
PDGFRB-210ENST00000522466 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.18
PDGFRB-210ENST00000522466 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
PDGFRB-210ENST00000522466 ATP10BO94823 1461 aa13.87□□□□□ -0.19
PDGFRB-210ENST00000522466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.86□□□□□ -0.19
PDGFRB-210ENST00000522466 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
PDGFRB-210ENST00000522466 FRMPD1Q5SYB0 1578 aa13.86□□□□□ -0.19
PDGFRB-210ENST00000522466 ABCA9Q8IUA7 1624 aa13.86□□□□□ -0.19
PDGFRB-210ENST00000522466 ILDR2Q71H61 639 aa13.82□□□□□ -0.2
PDGFRB-210ENST00000522466 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
PDGFRB-210ENST00000522466 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
PDGFRB-210ENST00000522466 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
PDGFRB-210ENST00000522466 NEO1Q92859 1461 aa13.81□□□□□ -0.2
PDGFRB-210ENST00000522466 MLECQ14165 292 aa13.81□□□□□ -0.2
PDGFRB-210ENST00000522466 DISP3Q9P2K9 1392 aa13.8□□□□□ -0.2
PDGFRB-210ENST00000522466 ADRA2BP18089 450 aa13.79□□□□□ -0.2
PDGFRB-210ENST00000522466 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
PDGFRB-210ENST00000522466 ARHGEF40Q8TER5 1519 aa13.78□□□□□ -0.2
PDGFRB-210ENST00000522466 RAPGEF6Q8TEU7 1601 aa13.77□□□□□ -0.21
PDGFRB-210ENST00000522466 SIGLEC1Q9BZZ2 1709 aa13.77□□□□□ -0.21
PDGFRB-210ENST00000522466 RICTORQ6R327 1708 aa13.76□□□□□ -0.21
PDGFRB-210ENST00000522466 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
PDGFRB-210ENST00000522466 PRXQ9BXM0 1461 aa13.75□□□□□ -0.21
PDGFRB-210ENST00000522466 AKNAQ7Z591 1439 aa13.73□□□□□ -0.21
PDGFRB-210ENST00000522466 FER1L4A9Z1Z3 1794 aa13.73□□□□□ -0.21
PDGFRB-210ENST00000522466 SOCS7O14512 581 aa13.73□□□□□ -0.21
PDGFRB-210ENST00000522466 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
PDGFRB-210ENST00000522466 FANCAO15360 1455 aa13.72□□□□□ -0.21
PDGFRB-210ENST00000522466 POGZQ7Z3K3 1410 aa13.72□□□□□ -0.21
PDGFRB-210ENST00000522466 SAMD9Q5K651 1589 aa13.71□□□□□ -0.22
PDGFRB-210ENST00000522466 ZFYVE16Q7Z3T8 1539 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms