RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 DIP2BQ9P265 1576 aa20.54■□□□□ 0.88
CTNNA1-234ENST00000522227 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
CTNNA1-234ENST00000522227 FHAD1B1AJZ9 1412 aa20.47■□□□□ 0.87
CTNNA1-234ENST00000522227 MAPKBP1O60336 1514 aa20.47■□□□□ 0.87
CTNNA1-234ENST00000522227 ADGRL1O94910 1474 aa20.45■□□□□ 0.86
CTNNA1-234ENST00000522227 HECW2Q9P2P5 1572 aa20.43■□□□□ 0.86
CTNNA1-234ENST00000522227 ADCY10Q96PN6 1610 aa20.42■□□□□ 0.86
CTNNA1-234ENST00000522227 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
CTNNA1-234ENST00000522227 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
CTNNA1-234ENST00000522227 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
CTNNA1-234ENST00000522227 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
CTNNA1-234ENST00000522227 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
CTNNA1-234ENST00000522227 PPRC1Q5VV67 1664 aaKnown RBP20.19■□□□□ 0.82
CTNNA1-234ENST00000522227 COL17A1Q9UMD9 1497 aaPredicted RBP20.19■□□□□ 0.82
CTNNA1-234ENST00000522227 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
CTNNA1-234ENST00000522227 ASXL2Q76L83 1435 aa20.16■□□□□ 0.82
CTNNA1-234ENST00000522227 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
CTNNA1-234ENST00000522227 PTPRGP23470 1445 aa20.14■□□□□ 0.81
CTNNA1-234ENST00000522227 KIAA0586Q9BVV6 1533 aa20.09■□□□□ 0.81
CTNNA1-234ENST00000522227 PLB1Q6P1J6 1458 aa20.09■□□□□ 0.81
CTNNA1-234ENST00000522227 GLI2P10070 1586 aa20.08■□□□□ 0.81
CTNNA1-234ENST00000522227 ABCC2Q92887 1545 aa20.08■□□□□ 0.81
CTNNA1-234ENST00000522227 CUL7Q14999 1698 aa20.05■□□□□ 0.8
CTNNA1-234ENST00000522227 LMTK3Q96Q04 1460 aa20.04■□□□□ 0.8
CTNNA1-234ENST00000522227 TEX14Q8IWB6 1497 aa20■□□□□ 0.79
CTNNA1-234ENST00000522227 TNIKQ9UKE5 1360 aa20■□□□□ 0.79
CTNNA1-234ENST00000522227 EPRSP07814 1512 aaKnown RBP20■□□□□ 0.79
CTNNA1-234ENST00000522227 MAP3K4Q9Y6R4 1608 aa19.98■□□□□ 0.79
CTNNA1-234ENST00000522227 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
CTNNA1-234ENST00000522227 CARMIL2Q6F5E8 1435 aa19.96■□□□□ 0.79
CTNNA1-234ENST00000522227 UACAQ9BZF9 1416 aa19.93■□□□□ 0.78
CTNNA1-234ENST00000522227 IGF1RP08069 1367 aa19.92■□□□□ 0.78
CTNNA1-234ENST00000522227 UHRF1BP1LA0JNW5 1464 aa19.9■□□□□ 0.78
CTNNA1-234ENST00000522227 KIF21BO75037 1637 aa19.89■□□□□ 0.77
CTNNA1-234ENST00000522227 ILDR2Q71H61 639 aa19.89■□□□□ 0.77
CTNNA1-234ENST00000522227 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
CTNNA1-234ENST00000522227 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
CTNNA1-234ENST00000522227 KDM5BQ9UGL1 1544 aa19.84■□□□□ 0.77
CTNNA1-234ENST00000522227 DISP3Q9P2K9 1392 aa19.83■□□□□ 0.76
CTNNA1-234ENST00000522227 SOCS7O14512 581 aa19.82■□□□□ 0.76
CTNNA1-234ENST00000522227 PTPRMP28827 1452 aa19.8■□□□□ 0.76
CTNNA1-234ENST00000522227 CD109Q6YHK3 1445 aa19.8■□□□□ 0.76
CTNNA1-234ENST00000522227 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
CTNNA1-234ENST00000522227 IQGAP2Q13576 1575 aa19.79■□□□□ 0.76
CTNNA1-234ENST00000522227 CARMIL1Q5VZK9 1371 aa19.79■□□□□ 0.76
CTNNA1-234ENST00000522227 WDR7Q9Y4E6 1490 aa19.79■□□□□ 0.76
CTNNA1-234ENST00000522227 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
CTNNA1-234ENST00000522227 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
CTNNA1-234ENST00000522227 HSPA2P54652 639 aa19.73■□□□□ 0.75
CTNNA1-234ENST00000522227 PCF11O94913 1555 aaKnown RBP19.73■□□□□ 0.75
CTNNA1-234ENST00000522227 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
CTNNA1-234ENST00000522227 CERKQ8TCT0 537 aa19.72■□□□□ 0.75
CTNNA1-234ENST00000522227 ARID4BQ4LE39 1312 aaPredicted RBP19.71■□□□□ 0.75
CTNNA1-234ENST00000522227 ADAMTSL3P82987 1691 aa19.69■□□□□ 0.74
CTNNA1-234ENST00000522227 CFAP43Q8NDM7 1665 aa19.68■□□□□ 0.74
CTNNA1-234ENST00000522227 KIAA0556O60303 1618 aa19.63■□□□□ 0.73
CTNNA1-234ENST00000522227 MADDQ8WXG6 1647 aa19.63■□□□□ 0.73
CTNNA1-234ENST00000522227 ARID3CA6NKF2 412 aa19.63■□□□□ 0.73
CTNNA1-234ENST00000522227 RAPGEF3O95398 923 aa19.62■□□□□ 0.73
CTNNA1-234ENST00000522227 ARAP3Q8WWN8 1544 aa19.6■□□□□ 0.73
CTNNA1-234ENST00000522227 UGGT2Q9NYU1 1516 aa19.6■□□□□ 0.73
CTNNA1-234ENST00000522227 BCORL1Q5H9F3 1711 aa19.59■□□□□ 0.73
CTNNA1-234ENST00000522227 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
CTNNA1-234ENST00000522227 SPATA31D1Q6ZQQ2 1576 aa19.52■□□□□ 0.71
CTNNA1-234ENST00000522227 ABCA8O94911 1581 aa19.49■□□□□ 0.71
CTNNA1-234ENST00000522227 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
CTNNA1-234ENST00000522227 MLECQ14165 292 aa19.45■□□□□ 0.7
CTNNA1-234ENST00000522227 FRMPD1Q5SYB0 1578 aa19.43■□□□□ 0.7
CTNNA1-234ENST00000522227 PHLDB1Q86UU1 1377 aa19.43■□□□□ 0.7
CTNNA1-234ENST00000522227 P3H3Q8IVL6 736 aa19.39■□□□□ 0.69
CTNNA1-234ENST00000522227 GOLGA3Q08378 1498 aa19.39■□□□□ 0.69
CTNNA1-234ENST00000522227 ABCA9Q8IUA7 1624 aa19.38■□□□□ 0.69
CTNNA1-234ENST00000522227 ATP10BO94823 1461 aa19.37■□□□□ 0.69
CTNNA1-234ENST00000522227 NEO1Q92859 1461 aa19.37■□□□□ 0.69
CTNNA1-234ENST00000522227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
CTNNA1-234ENST00000522227 HNRNPUL2Q1KMD3 747 aaKnown RBP19.37■□□□□ 0.69
CTNNA1-234ENST00000522227 ARHGEF40Q8TER5 1519 aa19.35■□□□□ 0.69
CTNNA1-234ENST00000522227 POGZQ7Z3K3 1410 aa19.34■□□□□ 0.69
CTNNA1-234ENST00000522227 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.69
CTNNA1-234ENST00000522227 FANCAO15360 1455 aa19.31■□□□□ 0.68
CTNNA1-234ENST00000522227 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
CTNNA1-234ENST00000522227 DENND4BO75064 1496 aaPredicted RBP19.3■□□□□ 0.68
CTNNA1-234ENST00000522227 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
CTNNA1-234ENST00000522227 SIGLEC1Q9BZZ2 1709 aa19.29■□□□□ 0.68
CTNNA1-234ENST00000522227 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
CTNNA1-234ENST00000522227 YEATS2Q9ULM3 1422 aa19.29■□□□□ 0.68
CTNNA1-234ENST00000522227 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
CTNNA1-234ENST00000522227 FER1L4A9Z1Z3 1794 aa19.27■□□□□ 0.67
CTNNA1-234ENST00000522227 RICTORQ6R327 1708 aa19.25■□□□□ 0.67
CTNNA1-234ENST00000522227 STRCQ7RTU9 1775 aa19.24■□□□□ 0.67
CTNNA1-234ENST00000522227 ZFYVE16Q7Z3T8 1539 aa19.23■□□□□ 0.67
CTNNA1-234ENST00000522227 PREX1Q8TCU6 1659 aa19.22■□□□□ 0.67
CTNNA1-234ENST00000522227 TTC37Q6PGP7 1564 aa19.22■□□□□ 0.67
CTNNA1-234ENST00000522227 FHOD3Q2V2M9 1422 aa19.21■□□□□ 0.67
CTNNA1-234ENST00000522227 EFCAB5A4FU69 1503 aa19.18■□□□□ 0.66
CTNNA1-234ENST00000522227 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
CTNNA1-234ENST00000522227 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.66
CTNNA1-234ENST00000522227 ZMYM4Q5VZL5 1548 aa19.14■□□□□ 0.65
CTNNA1-234ENST00000522227 HECW1Q76N89 1606 aa19.14■□□□□ 0.65
CTNNA1-234ENST00000522227 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms