RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 KDM4FA0A1W2PPD8 638 aa23.91■■□□□ 1.42
SRGAP3-212ENST00000520860 MAPKBP1O60336 1514 aa23.89■■□□□ 1.42
SRGAP3-212ENST00000520860 ILDR1Q86SU0 546 aaPredicted RBP23.89■■□□□ 1.41
SRGAP3-212ENST00000520860 DIP2BQ9P265 1576 aa23.88■■□□□ 1.41
SRGAP3-212ENST00000520860 KDM6BO15054 1643 aa23.88■■□□□ 1.41
SRGAP3-212ENST00000520860 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
SRGAP3-212ENST00000520860 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
SRGAP3-212ENST00000520860 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
SRGAP3-212ENST00000520860 ADCY10Q96PN6 1610 aa23.79■■□□□ 1.4
SRGAP3-212ENST00000520860 TSPOAP1O95153 1857 aa23.75■■□□□ 1.39
SRGAP3-212ENST00000520860 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
SRGAP3-212ENST00000520860 KIAA0586Q9BVV6 1533 aa23.64■■□□□ 1.37
SRGAP3-212ENST00000520860 ADGRL1O94910 1474 aa23.58■■□□□ 1.37
SRGAP3-212ENST00000520860 PTPRGP23470 1445 aa23.57■■□□□ 1.36
SRGAP3-212ENST00000520860 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
SRGAP3-212ENST00000520860 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
SRGAP3-212ENST00000520860 ABCC2Q92887 1545 aa23.51■■□□□ 1.35
SRGAP3-212ENST00000520860 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
SRGAP3-212ENST00000520860 GLI2P10070 1586 aa23.48■■□□□ 1.35
SRGAP3-212ENST00000520860 PPRC1Q5VV67 1664 aaKnown RBP23.48■■□□□ 1.35
SRGAP3-212ENST00000520860 IGF1RP08069 1367 aa23.47■■□□□ 1.35
SRGAP3-212ENST00000520860 TNIKQ9UKE5 1360 aa23.47■■□□□ 1.35
SRGAP3-212ENST00000520860 HECW2Q9P2P5 1572 aa23.47■■□□□ 1.35
SRGAP3-212ENST00000520860 CUL7Q14999 1698 aa23.46■■□□□ 1.35
SRGAP3-212ENST00000520860 CARMIL2Q6F5E8 1435 aa23.46■■□□□ 1.35
SRGAP3-212ENST00000520860 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
SRGAP3-212ENST00000520860 COL17A1Q9UMD9 1497 aaPredicted RBP23.39■■□□□ 1.34
SRGAP3-212ENST00000520860 UHRF1BP1LA0JNW5 1464 aa23.37■■□□□ 1.33
SRGAP3-212ENST00000520860 TEX14Q8IWB6 1497 aa23.37■■□□□ 1.33
SRGAP3-212ENST00000520860 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
SRGAP3-212ENST00000520860 EPRSP07814 1512 aaKnown RBP23.34■■□□□ 1.33
SRGAP3-212ENST00000520860 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
SRGAP3-212ENST00000520860 MAP3K4Q9Y6R4 1608 aa23.32■■□□□ 1.32
SRGAP3-212ENST00000520860 IQGAP2Q13576 1575 aa23.31■■□□□ 1.32
SRGAP3-212ENST00000520860 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
SRGAP3-212ENST00000520860 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
SRGAP3-212ENST00000520860 FBXO41Q8TF61 875 aa23.21■■□□□ 1.31
SRGAP3-212ENST00000520860 ZCCHC11Q5TAX3 1644 aaKnown RBP23.21■■□□□ 1.31
SRGAP3-212ENST00000520860 WDR7Q9Y4E6 1490 aa23.17■■□□□ 1.3
SRGAP3-212ENST00000520860 UGGT2Q9NYU1 1516 aa23.12■■□□□ 1.29
SRGAP3-212ENST00000520860 CD109Q6YHK3 1445 aa23.1■■□□□ 1.29
SRGAP3-212ENST00000520860 MAGI3Q5TCQ9 1506 aa23.1■■□□□ 1.29
SRGAP3-212ENST00000520860 KIAA0556O60303 1618 aa23.09■■□□□ 1.29
SRGAP3-212ENST00000520860 CFAP43Q8NDM7 1665 aa23.06■■□□□ 1.28
SRGAP3-212ENST00000520860 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
SRGAP3-212ENST00000520860 KIF21BO75037 1637 aa23.04■■□□□ 1.28
SRGAP3-212ENST00000520860 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
SRGAP3-212ENST00000520860 PTPRMP28827 1452 aa22.95■■□□□ 1.26
SRGAP3-212ENST00000520860 ARAP3Q8WWN8 1544 aa22.93■■□□□ 1.26
SRGAP3-212ENST00000520860 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
SRGAP3-212ENST00000520860 ABCA8O94911 1581 aa22.92■■□□□ 1.26
SRGAP3-212ENST00000520860 ADAMTSL3P82987 1691 aa22.88■■□□□ 1.25
SRGAP3-212ENST00000520860 PHLDB1Q86UU1 1377 aa22.86■■□□□ 1.25
SRGAP3-212ENST00000520860 PCF11O94913 1555 aaKnown RBP22.84■■□□□ 1.25
SRGAP3-212ENST00000520860 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
SRGAP3-212ENST00000520860 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
SRGAP3-212ENST00000520860 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
SRGAP3-212ENST00000520860 LMTK3Q96Q04 1460 aa22.79■■□□□ 1.24
SRGAP3-212ENST00000520860 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
SRGAP3-212ENST00000520860 RAPGEF3O95398 923 aa22.79■■□□□ 1.24
SRGAP3-212ENST00000520860 BCORL1Q5H9F3 1711 aa22.77■■□□□ 1.24
SRGAP3-212ENST00000520860 MADDQ8WXG6 1647 aa22.77■■□□□ 1.24
SRGAP3-212ENST00000520860 ABCA9Q8IUA7 1624 aa22.75■■□□□ 1.23
SRGAP3-212ENST00000520860 NEO1Q92859 1461 aa22.74■■□□□ 1.23
SRGAP3-212ENST00000520860 ATP10BO94823 1461 aa22.73■■□□□ 1.23
SRGAP3-212ENST00000520860 HSPA2P54652 639 aa22.68■■□□□ 1.22
SRGAP3-212ENST00000520860 RIMS1Q86UR5 1692 aaKnown RBP22.67■■□□□ 1.22
SRGAP3-212ENST00000520860 FRMPD1Q5SYB0 1578 aa22.67■■□□□ 1.22
SRGAP3-212ENST00000520860 CERKQ8TCT0 537 aa22.66■■□□□ 1.22
SRGAP3-212ENST00000520860 P3H3Q8IVL6 736 aa22.65■■□□□ 1.22
SRGAP3-212ENST00000520860 ARHGEF40Q8TER5 1519 aa22.63■■□□□ 1.21
SRGAP3-212ENST00000520860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.63■■□□□ 1.21
SRGAP3-212ENST00000520860 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
SRGAP3-212ENST00000520860 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
SRGAP3-212ENST00000520860 POGZQ7Z3K3 1410 aa22.6■■□□□ 1.21
SRGAP3-212ENST00000520860 PRXQ9BXM0 1461 aa22.6■■□□□ 1.21
SRGAP3-212ENST00000520860 DENND4BO75064 1496 aaPredicted RBP22.59■■□□□ 1.21
SRGAP3-212ENST00000520860 FANCAO15360 1455 aa22.57■■□□□ 1.2
SRGAP3-212ENST00000520860 DISP3Q9P2K9 1392 aa22.56■■□□□ 1.2
SRGAP3-212ENST00000520860 RAPGEF6Q8TEU7 1601 aa22.55■■□□□ 1.2
SRGAP3-212ENST00000520860 AKNAQ7Z591 1439 aa22.55■■□□□ 1.2
SRGAP3-212ENST00000520860 SOCS7O14512 581 aa22.53■■□□□ 1.2
SRGAP3-212ENST00000520860 FHOD3Q2V2M9 1422 aa22.53■■□□□ 1.2
SRGAP3-212ENST00000520860 RICTORQ6R327 1708 aa22.52■■□□□ 1.2
SRGAP3-212ENST00000520860 ILDR2Q71H61 639 aa22.51■■□□□ 1.19
SRGAP3-212ENST00000520860 CFAP74Q9C0B2 1584 aa22.48■■□□□ 1.19
SRGAP3-212ENST00000520860 MLECQ14165 292 aa22.48■■□□□ 1.19
SRGAP3-212ENST00000520860 EFCAB5A4FU69 1503 aa22.47■■□□□ 1.19
SRGAP3-212ENST00000520860 ZFYVE16Q7Z3T8 1539 aa22.47■■□□□ 1.19
SRGAP3-212ENST00000520860 SAMD9Q5K651 1589 aa22.47■■□□□ 1.19
SRGAP3-212ENST00000520860 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
SRGAP3-212ENST00000520860 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
SRGAP3-212ENST00000520860 ZMYM4Q5VZL5 1548 aa22.47■■□□□ 1.19
SRGAP3-212ENST00000520860 YEATS2Q9ULM3 1422 aa22.45■■□□□ 1.18
SRGAP3-212ENST00000520860 FER1L4A9Z1Z3 1794 aa22.43■■□□□ 1.18
SRGAP3-212ENST00000520860 TTC37Q6PGP7 1564 aa22.43■■□□□ 1.18
SRGAP3-212ENST00000520860 MAGI2Q86UL8 1455 aa22.43■■□□□ 1.18
SRGAP3-212ENST00000520860 SIGLEC1Q9BZZ2 1709 aa22.41■■□□□ 1.18
SRGAP3-212ENST00000520860 DMRT2Q9Y5R5 561 aa22.4■■□□□ 1.18
SRGAP3-212ENST00000520860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms