RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 MAP3K1Q13233 1512 aa15.6■□□□□ 0.09
PDGFRB-205ENST00000519575 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
PDGFRB-205ENST00000519575 SAMD9Q5K651 1589 aa15.55■□□□□ 0.08
PDGFRB-205ENST00000519575 AQRO60306 1485 aaKnown RBP eCLIP15.55■□□□□ 0.08
PDGFRB-205ENST00000519575 IQGAP2Q13576 1575 aa15.54■□□□□ 0.08
PDGFRB-205ENST00000519575 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
PDGFRB-205ENST00000519575 FYCO1Q9BQS8 1478 aa15.52■□□□□ 0.08
PDGFRB-205ENST00000519575 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
PDGFRB-205ENST00000519575 RANGAP1P46060 587 aaPredicted RBP15.5■□□□□ 0.07
PDGFRB-205ENST00000519575 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
PDGFRB-205ENST00000519575 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
PDGFRB-205ENST00000519575 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
PDGFRB-205ENST00000519575 TIAM1Q13009 1591 aa15.48■□□□□ 0.07
PDGFRB-205ENST00000519575 GRIN2AQ12879 1464 aa15.47■□□□□ 0.07
PDGFRB-205ENST00000519575 CASKIN1Q8WXD9 1431 aa15.46■□□□□ 0.07
PDGFRB-205ENST00000519575 HRCP23327 699 aa15.46■□□□□ 0.07
PDGFRB-205ENST00000519575 KIAA0586Q9BVV6 1533 aa15.46■□□□□ 0.07
PDGFRB-205ENST00000519575 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
PDGFRB-205ENST00000519575 UGGT2Q9NYU1 1516 aa15.45■□□□□ 0.06
PDGFRB-205ENST00000519575 ZEB1P37275 1124 aaPredicted RBP15.45■□□□□ 0.06
PDGFRB-205ENST00000519575 FHOD3Q2V2M9 1422 aa15.41■□□□□ 0.06
PDGFRB-205ENST00000519575 CCDC18Q5T9S5 1454 aa15.39■□□□□ 0.05
PDGFRB-205ENST00000519575 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
PDGFRB-205ENST00000519575 PPARGC1BQ86YN6 1023 aaKnown RBP15.38■□□□□ 0.05
PDGFRB-205ENST00000519575 LRRC9Q6ZRR7 1453 aa15.36■□□□□ 0.05
PDGFRB-205ENST00000519575 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
PDGFRB-205ENST00000519575 KIAA0556O60303 1618 aa15.35■□□□□ 0.05
PDGFRB-205ENST00000519575 NUP160Q12769 1436 aa15.35■□□□□ 0.05
PDGFRB-205ENST00000519575 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
PDGFRB-205ENST00000519575 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
PDGFRB-205ENST00000519575 CARMIL2Q6F5E8 1435 aa15.32■□□□□ 0.04
PDGFRB-205ENST00000519575 EHBP1L1Q8N3D4 1523 aa15.3■□□□□ 0.04
PDGFRB-205ENST00000519575 TTBK1Q5TCY1 1321 aaPredicted RBP15.28■□□□□ 0.04
PDGFRB-205ENST00000519575 P3H3Q8IVL6 736 aa15.27■□□□□ 0.04
PDGFRB-205ENST00000519575 DISP1Q96F81 1524 aa15.27■□□□□ 0.03
PDGFRB-205ENST00000519575 SUPT6HQ7KZ85 1726 aaKnown RBP15.26■□□□□ 0.03
PDGFRB-205ENST00000519575 CHD1O14646 1710 aa15.26■□□□□ 0.03
PDGFRB-205ENST00000519575 CCNB3Q8WWL7 1395 aa15.25■□□□□ 0.03
PDGFRB-205ENST00000519575 MTUS2Q5JR59 1369 aa15.24■□□□□ 0.03
PDGFRB-205ENST00000519575 KANK4Q5T7N3 995 aaPredicted RBP15.24■□□□□ 0.03
PDGFRB-205ENST00000519575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
PDGFRB-205ENST00000519575 RAPGEF6Q8TEU7 1601 aa15.23■□□□□ 0.03
PDGFRB-205ENST00000519575 LRRIQ1Q96JM4 1722 aa15.22■□□□□ 0.03
PDGFRB-205ENST00000519575 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
PDGFRB-205ENST00000519575 FBLN2P98095 1184 aa15.2■□□□□ 0.02
PDGFRB-205ENST00000519575 EPRSP07814 1512 aaKnown RBP15.2■□□□□ 0.02
PDGFRB-205ENST00000519575 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
PDGFRB-205ENST00000519575 CCER1Q8TC90 406 aaPredicted RBP15.17■□□□□ 0.02
PDGFRB-205ENST00000519575 CDK11AQ9UQ88 783 aaPredicted RBP15.17■□□□□ 0.02
PDGFRB-205ENST00000519575 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
PDGFRB-205ENST00000519575 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
PDGFRB-205ENST00000519575 ARHGEF11O15085 1522 aa15.13■□□□□ 0.01
PDGFRB-205ENST00000519575 MYOM3Q5VTT5 1437 aa15.13■□□□□ 0.01
PDGFRB-205ENST00000519575 NCOA2Q15596 1464 aa15.13■□□□□ 0.01
PDGFRB-205ENST00000519575 FGD6Q6ZV73 1430 aa15.12■□□□□ 0.01
PDGFRB-205ENST00000519575 CLSPNQ9HAW4 1339 aa15.12■□□□□ 0.01
PDGFRB-205ENST00000519575 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-205ENST00000519575 NUP153P49790 1475 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-205ENST00000519575 ABCA8O94911 1581 aa15.1■□□□□ 0.01
PDGFRB-205ENST00000519575 MIA2Q96PC5 1412 aa15.09■□□□□ 0.01
PDGFRB-205ENST00000519575 ADCY10Q96PN6 1610 aa15.09■□□□□ 0.01
PDGFRB-205ENST00000519575 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
PDGFRB-205ENST00000519575 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
PDGFRB-205ENST00000519575 CDK13Q14004 1512 aaKnown RBP15.07■□□□□ 0
PDGFRB-205ENST00000519575 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
PDGFRB-205ENST00000519575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
PDGFRB-205ENST00000519575 ACIN1Q9UKV3 1341 aaKnown RBP15.05■□□□□ -0
PDGFRB-205ENST00000519575 TCOF1Q13428 1488 aaKnown RBP15.05■□□□□ -0
PDGFRB-205ENST00000519575 PTPN23Q9H3S7 1636 aa15.05■□□□□ -0
PDGFRB-205ENST00000519575 MAGI3Q5TCQ9 1506 aa15.04■□□□□ -0
PDGFRB-205ENST00000519575 TROQ12816 1431 aaPredicted RBP15.04■□□□□ -0
PDGFRB-205ENST00000519575 PTPRGP23470 1445 aa15.03■□□□□ -0
PDGFRB-205ENST00000519575 PLB1Q6P1J6 1458 aa15.01□□□□□ -0.01
PDGFRB-205ENST00000519575 FAM50AQ14320 339 aaKnown RBP15.01□□□□□ -0.01
PDGFRB-205ENST00000519575 KIF14Q15058 1648 aa15.01□□□□□ -0.01
PDGFRB-205ENST00000519575 AKNAQ7Z591 1439 aa15□□□□□ -0.01
PDGFRB-205ENST00000519575 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
PDGFRB-205ENST00000519575 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
PDGFRB-205ENST00000519575 ABCC2Q92887 1545 aa14.97□□□□□ -0.01
PDGFRB-205ENST00000519575 HFM1A2PYH4 1435 aa14.95□□□□□ -0.02
PDGFRB-205ENST00000519575 UHRF1BP1LA0JNW5 1464 aa14.95□□□□□ -0.02
PDGFRB-205ENST00000519575 GCC2Q8IWJ2 1684 aa14.94□□□□□ -0.02
PDGFRB-205ENST00000519575 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
PDGFRB-205ENST00000519575 RAB3GAP2Q9H2M9 1393 aa14.93□□□□□ -0.02
PDGFRB-205ENST00000519575 DHX57Q6P158 1386 aaKnown RBP14.92□□□□□ -0.02
PDGFRB-205ENST00000519575 ATP10BO94823 1461 aa14.92□□□□□ -0.02
PDGFRB-205ENST00000519575 DNMT1P26358 1616 aaKnown RBP14.92□□□□□ -0.02
PDGFRB-205ENST00000519575 ITGAEP38570 1179 aa14.9□□□□□ -0.02
PDGFRB-205ENST00000519575 ROCK1Q13464 1354 aa14.88□□□□□ -0.03
PDGFRB-205ENST00000519575 ADGBQ8N7X0 1667 aa14.88□□□□□ -0.03
PDGFRB-205ENST00000519575 CDC42BPAQ5VT25 1732 aa14.88□□□□□ -0.03
PDGFRB-205ENST00000519575 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
PDGFRB-205ENST00000519575 CAMSAP2Q08AD1 1489 aa14.86□□□□□ -0.03
PDGFRB-205ENST00000519575 GPATCH8Q9UKJ3 1502 aaKnown RBP14.86□□□□□ -0.03
PDGFRB-205ENST00000519575 PREX2Q70Z35 1606 aa14.85□□□□□ -0.03
PDGFRB-205ENST00000519575 ABCC10Q5T3U5 1492 aa14.85□□□□□ -0.03
PDGFRB-205ENST00000519575 DAPK1P53355 1430 aa14.84□□□□□ -0.03
PDGFRB-205ENST00000519575 SHANK2Q9UPX8 1470 aa14.84□□□□□ -0.03
PDGFRB-205ENST00000519575 KDM5BQ9UGL1 1544 aa14.84□□□□□ -0.03
PDGFRB-205ENST00000519575 CFDP1Q9UEE9 299 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms