RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ZNF608Q9ULD9 1512 aaPredicted RBP28.42■■■□□ 2.14
FAM49B-214ENST00000519540 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
FAM49B-214ENST00000519540 FHAD1B1AJZ9 1412 aa28.39■■■□□ 2.13
FAM49B-214ENST00000519540 ADAMTS12P58397 1594 aa28.35■■■□□ 2.13
FAM49B-214ENST00000519540 EFCAB5A4FU69 1503 aa28.35■■■□□ 2.13
FAM49B-214ENST00000519540 P3H3Q8IVL6 736 aa28.29■■■□□ 2.12
FAM49B-214ENST00000519540 EIF4G3O43432 1585 aaKnown RBP28.28■■■□□ 2.12
FAM49B-214ENST00000519540 KANK4Q5T7N3 995 aaPredicted RBP28.26■■■□□ 2.12
FAM49B-214ENST00000519540 FHOD3Q2V2M9 1422 aa28.25■■■□□ 2.11
FAM49B-214ENST00000519540 MAP3K1Q13233 1512 aa28.21■■■□□ 2.11
FAM49B-214ENST00000519540 SAMD9Q5K651 1589 aa28.2■■■□□ 2.11
FAM49B-214ENST00000519540 SNAPC4Q5SXM2 1469 aa28.19■■■□□ 2.1
FAM49B-214ENST00000519540 PCF11O94913 1555 aaKnown RBP28.16■■■□□ 2.1
FAM49B-214ENST00000519540 TIAM1Q13009 1591 aa28.16■■■□□ 2.1
FAM49B-214ENST00000519540 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
FAM49B-214ENST00000519540 FMN1Q68DA7 1419 aa28.12■■■□□ 2.09
FAM49B-214ENST00000519540 IQGAP2Q13576 1575 aa28.12■■■□□ 2.09
FAM49B-214ENST00000519540 MAGI1Q96QZ7 1491 aaPredicted RBP28.12■■■□□ 2.09
FAM49B-214ENST00000519540 CASKIN1Q8WXD9 1431 aa28.11■■■□□ 2.09
FAM49B-214ENST00000519540 FYCO1Q9BQS8 1478 aa28.11■■■□□ 2.09
FAM49B-214ENST00000519540 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
FAM49B-214ENST00000519540 CFAP43Q8NDM7 1665 aa28.05■■■□□ 2.08
FAM49B-214ENST00000519540 LRRC9Q6ZRR7 1453 aa28.04■■■□□ 2.08
FAM49B-214ENST00000519540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
FAM49B-214ENST00000519540 ATP1B4Q9UN42 357 aaPredicted RBP28.02■■■□□ 2.08
FAM49B-214ENST00000519540 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
FAM49B-214ENST00000519540 KIAA0586Q9BVV6 1533 aa28.02■■■□□ 2.08
FAM49B-214ENST00000519540 HNRNPUL2Q1KMD3 747 aaKnown RBP28■■■□□ 2.07
FAM49B-214ENST00000519540 UGGT2Q9NYU1 1516 aa27.99■■■□□ 2.07
FAM49B-214ENST00000519540 RRBP1Q9P2E9 1410 aaKnown RBP27.99■■■□□ 2.07
FAM49B-214ENST00000519540 CHMP7Q8WUX9 453 aaPredicted RBP27.98■■■□□ 2.07
FAM49B-214ENST00000519540 CCER1Q8TC90 406 aaPredicted RBP27.96■■■□□ 2.07
FAM49B-214ENST00000519540 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
FAM49B-214ENST00000519540 FBLN2P98095 1184 aa27.89■■■□□ 2.06
FAM49B-214ENST00000519540 CCNB3Q8WWL7 1395 aa27.88■■■□□ 2.05
FAM49B-214ENST00000519540 LRRIQ1Q96JM4 1722 aa27.87■■■□□ 2.05
FAM49B-214ENST00000519540 DISP1Q96F81 1524 aa27.85■■■□□ 2.05
FAM49B-214ENST00000519540 NUP160Q12769 1436 aa27.85■■■□□ 2.05
FAM49B-214ENST00000519540 KIAA0556O60303 1618 aa27.83■■■□□ 2.05
FAM49B-214ENST00000519540 PHLDB1Q86UU1 1377 aa27.83■■■□□ 2.04
FAM49B-214ENST00000519540 HECW1Q76N89 1606 aa27.77■■■□□ 2.04
FAM49B-214ENST00000519540 CCDC18Q5T9S5 1454 aa27.75■■■□□ 2.03
FAM49B-214ENST00000519540 MTUS2Q5JR59 1369 aa27.75■■■□□ 2.03
FAM49B-214ENST00000519540 JPH4Q96JJ6 628 aa27.71■■■□□ 2.03
FAM49B-214ENST00000519540 EPRSP07814 1512 aaKnown RBP27.69■■■□□ 2.02
FAM49B-214ENST00000519540 EHBP1L1Q8N3D4 1523 aa27.67■■■□□ 2.02
FAM49B-214ENST00000519540 CARMIL2Q6F5E8 1435 aa27.65■■■□□ 2.02
FAM49B-214ENST00000519540 MAGI3Q5TCQ9 1506 aa27.64■■■□□ 2.02
FAM49B-214ENST00000519540 SUPT6HQ7KZ85 1726 aaKnown RBP27.62■■■□□ 2.01
FAM49B-214ENST00000519540 ITGAEP38570 1179 aa27.62■■■□□ 2.01
FAM49B-214ENST00000519540 NCOA2Q15596 1464 aa27.62■■■□□ 2.01
FAM49B-214ENST00000519540 CHD1O14646 1710 aa27.62■■■□□ 2.01
FAM49B-214ENST00000519540 CDK13Q14004 1512 aaKnown RBP27.61■■■□□ 2.01
FAM49B-214ENST00000519540 RAPGEF6Q8TEU7 1601 aa27.61■■■□□ 2.01
FAM49B-214ENST00000519540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.6■■■□□ 2.015e-6■■■□□ 14.8
FAM49B-214ENST00000519540 FAM50AQ14320 339 aaKnown RBP27.6■■■□□ 2.01
FAM49B-214ENST00000519540 FGD6Q6ZV73 1430 aa27.58■■■□□ 2.01
FAM49B-214ENST00000519540 NUP153P49790 1475 aaKnown RBP27.57■■■□□ 2
FAM49B-214ENST00000519540 ARHGEF11O15085 1522 aa27.56■■■□□ 2
FAM49B-214ENST00000519540 MYOM3Q5VTT5 1437 aa27.54■■■□□ 2
FAM49B-214ENST00000519540 ARID3CA6NKF2 412 aa27.53■■■□□ 2
FAM49B-214ENST00000519540 PLB1Q6P1J6 1458 aa27.5■■□□□ 1.99
FAM49B-214ENST00000519540 PRG4Q92954 1404 aaPredicted RBP27.47■■□□□ 1.99
FAM49B-214ENST00000519540 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
FAM49B-214ENST00000519540 SETD5Q9C0A6 1442 aa27.42■■□□□ 1.98
FAM49B-214ENST00000519540 CDK11AQ9UQ88 783 aaPredicted RBP27.42■■□□□ 1.98
FAM49B-214ENST00000519540 RAB3GAP2Q9H2M9 1393 aa27.42■■□□□ 1.98
FAM49B-214ENST00000519540 SHROOM2Q13796 1616 aa27.41■■□□□ 1.98
FAM49B-214ENST00000519540 ABCA8O94911 1581 aa27.41■■□□□ 1.98
FAM49B-214ENST00000519540 CLSPNQ9HAW4 1339 aa27.41■■□□□ 1.98
FAM49B-214ENST00000519540 PTPN23Q9H3S7 1636 aa27.39■■□□□ 1.98
FAM49B-214ENST00000519540 TCOF1Q13428 1488 aaKnown RBP27.35■■□□□ 1.97
FAM49B-214ENST00000519540 PTPRGP23470 1445 aa27.35■■□□□ 1.97
FAM49B-214ENST00000519540 MIA2Q96PC5 1412 aa27.35■■□□□ 1.97
FAM49B-214ENST00000519540 TROQ12816 1431 aaPredicted RBP27.33■■□□□ 1.97
FAM49B-214ENST00000519540 PTPRKQ15262 1439 aa27.32■■□□□ 1.96
FAM49B-214ENST00000519540 CLASP1Q7Z460 1538 aa27.29■■□□□ 1.96
FAM49B-214ENST00000519540 ATP10BO94823 1461 aa27.28■■□□□ 1.96
FAM49B-214ENST00000519540 ADCY10Q96PN6 1610 aa27.24■■□□□ 1.95
FAM49B-214ENST00000519540 ERCC6L2Q5T890 1561 aa27.23■■□□□ 1.95
FAM49B-214ENST00000519540 HFM1A2PYH4 1435 aa27.23■■□□□ 1.95
FAM49B-214ENST00000519540 PLEKHD1A6NEE1 506 aa27.21■■□□□ 1.95
FAM49B-214ENST00000519540 UACAQ9BZF9 1416 aa27.19■■□□□ 1.94
FAM49B-214ENST00000519540 KIF14Q15058 1648 aa27.19■■□□□ 1.94
FAM49B-214ENST00000519540 NAIPQ13075 1403 aa27.16■■□□□ 1.94
FAM49B-214ENST00000519540 MAPKBP1O60336 1514 aa27.15■■□□□ 1.94
FAM49B-214ENST00000519540 GPATCH8Q9UKJ3 1502 aaKnown RBP27.14■■□□□ 1.93
FAM49B-214ENST00000519540 ITSN2Q9NZM3 1697 aa27.13■■□□□ 1.93
FAM49B-214ENST00000519540 ZNF644Q9H582 1327 aaPredicted RBP27.11■■□□□ 1.93
FAM49B-214ENST00000519540 CFDP1Q9UEE9 299 aaPredicted RBP27.09■■□□□ 1.93
FAM49B-214ENST00000519540 CHIC2Q9UKJ5 165 aa27.09■■□□□ 1.93
FAM49B-214ENST00000519540 AKNAQ7Z591 1439 aa27.09■■□□□ 1.93
FAM49B-214ENST00000519540 ABCC10Q5T3U5 1492 aa27.08■■□□□ 1.93
FAM49B-214ENST00000519540 ABCC2Q92887 1545 aa27.08■■□□□ 1.93
FAM49B-214ENST00000519540 DNMT1P26358 1616 aaKnown RBP27.07■■□□□ 1.92
FAM49B-214ENST00000519540 DAPK1P53355 1430 aa27.07■■□□□ 1.92
FAM49B-214ENST00000519540 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
FAM49B-214ENST00000519540 ABCC5O15440 1437 aa27.05■■□□□ 1.92
FAM49B-214ENST00000519540 GCC2Q8IWJ2 1684 aa27.05■■□□□ 1.92
FAM49B-214ENST00000519540 CAMSAP2Q08AD1 1489 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms