RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
PABPC1-207ENST00000518716 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
PABPC1-207ENST00000518716 ASTLQ6HA08 431 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-207ENST00000518716 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
PABPC1-207ENST00000518716 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
PABPC1-207ENST00000518716 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
PABPC1-207ENST00000518716 ATMINO43313 823 aaPredicted RBP13.27□□□□□ -0.29
PABPC1-207ENST00000518716 SLC39A7Q92504 469 aa13.24□□□□□ -0.29
PABPC1-207ENST00000518716 C7P10643 843 aa13.23□□□□□ -0.29
PABPC1-207ENST00000518716 LCE2DQ5TA82 110 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-207ENST00000518716 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
PABPC1-207ENST00000518716 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
PABPC1-207ENST00000518716 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
PABPC1-207ENST00000518716 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
PABPC1-207ENST00000518716 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
PABPC1-207ENST00000518716 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
PABPC1-207ENST00000518716 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
PABPC1-207ENST00000518716 FAM163AQ96GL9 167 aaPredicted RBP13.1□□□□□ -0.31
PABPC1-207ENST00000518716 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
PABPC1-207ENST00000518716 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
PABPC1-207ENST00000518716 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
PABPC1-207ENST00000518716 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
PABPC1-207ENST00000518716 KIF12Q96FN5 646 aa13.04□□□□□ -0.32
PABPC1-207ENST00000518716 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
PABPC1-207ENST00000518716 BMP2KQ9NSY1 1161 aaPredicted RBP13.03□□□□□ -0.32
PABPC1-207ENST00000518716 PROM2Q8N271 834 aa12.96□□□□□ -0.33
PABPC1-207ENST00000518716 SHROOM4Q9ULL8 1493 aa12.93□□□□□ -0.34
PABPC1-207ENST00000518716 MAP3K13O43283 966 aa12.93□□□□□ -0.34
PABPC1-207ENST00000518716 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-207ENST00000518716 TIE1P35590 1138 aa12.91□□□□□ -0.34
PABPC1-207ENST00000518716 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
PABPC1-207ENST00000518716 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
PABPC1-207ENST00000518716 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
PABPC1-207ENST00000518716 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
PABPC1-207ENST00000518716 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
PABPC1-207ENST00000518716 CDAN1Q8IWY9 1227 aa12.85□□□□□ -0.35
PABPC1-207ENST00000518716 DCAF1Q9Y4B6 1507 aa12.84□□□□□ -0.35
PABPC1-207ENST00000518716 SEC24BO95487 1268 aa12.82□□□□□ -0.36
PABPC1-207ENST00000518716 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
PABPC1-207ENST00000518716 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
PABPC1-207ENST00000518716 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
PABPC1-207ENST00000518716 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
PABPC1-207ENST00000518716 IER5LQ5T953 404 aa12.75□□□□□ -0.37
PABPC1-207ENST00000518716 MIER1Q8N108 512 aa12.75□□□□□ -0.37
PABPC1-207ENST00000518716 ST18O60284 1047 aa12.73□□□□□ -0.37
PABPC1-207ENST00000518716 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
PABPC1-207ENST00000518716 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
PABPC1-207ENST00000518716 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
PABPC1-207ENST00000518716 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
PABPC1-207ENST00000518716 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
PABPC1-207ENST00000518716 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
PABPC1-207ENST00000518716 NUBP1P53384 320 aa12.61□□□□□ -0.39
PABPC1-207ENST00000518716 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
PABPC1-207ENST00000518716 PLCG2P16885 1265 aa12.59□□□□□ -0.39
PABPC1-207ENST00000518716 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-207ENST00000518716 MMRN1Q13201 1228 aa12.58□□□□□ -0.4
PABPC1-207ENST00000518716 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
PABPC1-207ENST00000518716 SPNS2Q8IVW8 549 aa12.56□□□□□ -0.4
PABPC1-207ENST00000518716 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-207ENST00000518716 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
PABPC1-207ENST00000518716 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
PABPC1-207ENST00000518716 OCEL1Q9H607 264 aa12.47□□□□□ -0.41
PABPC1-207ENST00000518716 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-207ENST00000518716 CUX2O14529 1486 aa12.45□□□□□ -0.42
PABPC1-207ENST00000518716 SNPHO15079 494 aa12.41□□□□□ -0.42
PABPC1-207ENST00000518716 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
PABPC1-207ENST00000518716 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
PABPC1-207ENST00000518716 PYGBP11216 843 aa12.36□□□□□ -0.43
PABPC1-207ENST00000518716 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
PABPC1-207ENST00000518716 PDCD7Q8N8D1 485 aaKnown RBP12.33□□□□□ -0.44
PABPC1-207ENST00000518716 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
PABPC1-207ENST00000518716 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
PABPC1-207ENST00000518716 EMP3P54852 163 aa12.3□□□□□ -0.44
PABPC1-207ENST00000518716 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
PABPC1-207ENST00000518716 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
PABPC1-207ENST00000518716 ERCC6Q03468 1493 aa12.29□□□□□ -0.44
PABPC1-207ENST00000518716 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
PABPC1-207ENST00000518716 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.45
PABPC1-207ENST00000518716 C3orf67Q6ZVT6 689 aa12.25□□□□□ -0.45
PABPC1-207ENST00000518716 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
PABPC1-207ENST00000518716 FAM205CA6NFA0 338 aa12.22□□□□□ -0.45
PABPC1-207ENST00000518716 NESP48681 1621 aa12.21□□□□□ -0.46
PABPC1-207ENST00000518716 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
PABPC1-207ENST00000518716 L3MBTL3Q96JM7 780 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-207ENST00000518716 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
PABPC1-207ENST00000518716 SMARCA2P51531 1590 aa12.17□□□□□ -0.46
PABPC1-207ENST00000518716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.46
PABPC1-207ENST00000518716 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
PABPC1-207ENST00000518716 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
PABPC1-207ENST00000518716 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-207ENST00000518716 THOC2Q8NI27 1593 aaKnown RBP12.13□□□□□ -0.47
PABPC1-207ENST00000518716 FKBP8Q14318 412 aa12.11□□□□□ -0.47
PABPC1-207ENST00000518716 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-207ENST00000518716 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-207ENST00000518716 DPY19L2Q6NUT2 758 aa12.08□□□□□ -0.48
PABPC1-207ENST00000518716 PEG3Q9GZU2 1588 aa12.08□□□□□ -0.48
PABPC1-207ENST00000518716 PSEN1P49768 467 aa12.07□□□□□ -0.48
PABPC1-207ENST00000518716 BAZ1BQ9UIG0 1483 aaKnown RBP12.07□□□□□ -0.48
PABPC1-207ENST00000518716 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
PABPC1-207ENST00000518716 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms