RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 MAPKBP1O60336 1514 aa21.06■□□□□ 0.96
TMEM55A-202ENST00000518359 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
TMEM55A-202ENST00000518359 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
TMEM55A-202ENST00000518359 NPM1P06748 294 aaKnown RBP eCLIP21.05■□□□□ 0.96
TMEM55A-202ENST00000518359 DIP2BQ9P265 1576 aa21.03■□□□□ 0.96
TMEM55A-202ENST00000518359 FAM69CQ0P6D2 419 aa21.03■□□□□ 0.96
TMEM55A-202ENST00000518359 ADCY10Q96PN6 1610 aa20.99■□□□□ 0.95
TMEM55A-202ENST00000518359 KDM6BO15054 1643 aa20.98■□□□□ 0.95
TMEM55A-202ENST00000518359 TSPOAP1O95153 1857 aa20.94■□□□□ 0.94
TMEM55A-202ENST00000518359 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
TMEM55A-202ENST00000518359 CUL7Q14999 1698 aa20.87■□□□□ 0.93
TMEM55A-202ENST00000518359 KDM4FA0A1W2PPD8 638 aa20.82■□□□□ 0.92
TMEM55A-202ENST00000518359 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
TMEM55A-202ENST00000518359 PTPRGP23470 1445 aa20.76■□□□□ 0.91
TMEM55A-202ENST00000518359 IGF1RP08069 1367 aa20.75■□□□□ 0.91
TMEM55A-202ENST00000518359 CARMIL2Q6F5E8 1435 aa20.73■□□□□ 0.91
TMEM55A-202ENST00000518359 ABCC2Q92887 1545 aa20.73■□□□□ 0.91
TMEM55A-202ENST00000518359 GLI2P10070 1586 aa20.71■□□□□ 0.91
TMEM55A-202ENST00000518359 PPRC1Q5VV67 1664 aaKnown RBP20.7■□□□□ 0.91
TMEM55A-202ENST00000518359 PLB1Q6P1J6 1458 aa20.7■□□□□ 0.9
TMEM55A-202ENST00000518359 TNIKQ9UKE5 1360 aa20.7■□□□□ 0.9
TMEM55A-202ENST00000518359 TTBK1Q5TCY1 1321 aaPredicted RBP20.68■□□□□ 0.9
TMEM55A-202ENST00000518359 ASXL2Q76L83 1435 aa20.68■□□□□ 0.9
TMEM55A-202ENST00000518359 IQGAP2Q13576 1575 aa20.67■□□□□ 0.9
TMEM55A-202ENST00000518359 UHRF1BP1LA0JNW5 1464 aa20.64■□□□□ 0.89
TMEM55A-202ENST00000518359 ADGRL1O94910 1474 aa20.64■□□□□ 0.89
TMEM55A-202ENST00000518359 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
TMEM55A-202ENST00000518359 ILDR1Q86SU0 546 aaPredicted RBP20.62■□□□□ 0.89
TMEM55A-202ENST00000518359 UACAQ9BZF9 1416 aa20.6■□□□□ 0.89
TMEM55A-202ENST00000518359 MAP3K4Q9Y6R4 1608 aa20.6■□□□□ 0.89
TMEM55A-202ENST00000518359 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.89
TMEM55A-202ENST00000518359 EPRSP07814 1512 aaKnown RBP20.56■□□□□ 0.88
TMEM55A-202ENST00000518359 KDM5BQ9UGL1 1544 aa20.55■□□□□ 0.88
TMEM55A-202ENST00000518359 ZCCHC11Q5TAX3 1644 aaKnown RBP20.55■□□□□ 0.88
TMEM55A-202ENST00000518359 DISP1Q96F81 1524 aa20.54■□□□□ 0.88
TMEM55A-202ENST00000518359 HECW2Q9P2P5 1572 aa20.51■□□□□ 0.87
TMEM55A-202ENST00000518359 COL17A1Q9UMD9 1497 aaPredicted RBP20.5■□□□□ 0.87
TMEM55A-202ENST00000518359 UGGT2Q9NYU1 1516 aa20.49■□□□□ 0.87
TMEM55A-202ENST00000518359 KIAA0556O60303 1618 aa20.48■□□□□ 0.87
TMEM55A-202ENST00000518359 WDR7Q9Y4E6 1490 aa20.43■□□□□ 0.86
TMEM55A-202ENST00000518359 RAPGEF2Q9Y4G8 1499 aa20.43■□□□□ 0.86
TMEM55A-202ENST00000518359 CFAP43Q8NDM7 1665 aa20.42■□□□□ 0.86
TMEM55A-202ENST00000518359 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.86
TMEM55A-202ENST00000518359 MAGI3Q5TCQ9 1506 aa20.36■□□□□ 0.85
TMEM55A-202ENST00000518359 CD109Q6YHK3 1445 aa20.34■□□□□ 0.85
TMEM55A-202ENST00000518359 GOLGA3Q08378 1498 aa20.33■□□□□ 0.85
TMEM55A-202ENST00000518359 KIF21BO75037 1637 aa20.3■□□□□ 0.84
TMEM55A-202ENST00000518359 ABCA8O94911 1581 aa20.29■□□□□ 0.84
TMEM55A-202ENST00000518359 KCNH8Q96L42 1107 aa20.27■□□□□ 0.84
TMEM55A-202ENST00000518359 ARAP3Q8WWN8 1544 aa20.22■□□□□ 0.83
TMEM55A-202ENST00000518359 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
TMEM55A-202ENST00000518359 FBXO41Q8TF61 875 aa20.15■□□□□ 0.82
TMEM55A-202ENST00000518359 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
TMEM55A-202ENST00000518359 ADAMTSL3P82987 1691 aa20.14■□□□□ 0.81
TMEM55A-202ENST00000518359 ABCA9Q8IUA7 1624 aa20.14■□□□□ 0.81
TMEM55A-202ENST00000518359 PTPRMP28827 1452 aa20.11■□□□□ 0.81
TMEM55A-202ENST00000518359 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
TMEM55A-202ENST00000518359 BCORL1Q5H9F3 1711 aa20.08■□□□□ 0.81
TMEM55A-202ENST00000518359 ATP10BO94823 1461 aa20.08■□□□□ 0.81
TMEM55A-202ENST00000518359 NEO1Q92859 1461 aa20.07■□□□□ 0.8
TMEM55A-202ENST00000518359 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
TMEM55A-202ENST00000518359 MADDQ8WXG6 1647 aa20.04■□□□□ 0.8
TMEM55A-202ENST00000518359 PCF11O94913 1555 aaKnown RBP20.04■□□□□ 0.8
TMEM55A-202ENST00000518359 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
TMEM55A-202ENST00000518359 SAMD9Q5K651 1589 aa20.01■□□□□ 0.79
TMEM55A-202ENST00000518359 FRMPD1Q5SYB0 1578 aa20.01■□□□□ 0.79
TMEM55A-202ENST00000518359 RAPGEF3O95398 923 aa20.01■□□□□ 0.79
TMEM55A-202ENST00000518359 P3H3Q8IVL6 736 aa20■□□□□ 0.79
TMEM55A-202ENST00000518359 ARID4BQ4LE39 1312 aaPredicted RBP20■□□□□ 0.79
TMEM55A-202ENST00000518359 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
TMEM55A-202ENST00000518359 ARHGEF40Q8TER5 1519 aa19.97■□□□□ 0.79
TMEM55A-202ENST00000518359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.97■□□□□ 0.79
TMEM55A-202ENST00000518359 HNRNPUL2Q1KMD3 747 aaKnown RBP19.97■□□□□ 0.79
TMEM55A-202ENST00000518359 LMTK3Q96Q04 1460 aa19.97■□□□□ 0.79
TMEM55A-202ENST00000518359 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
TMEM55A-202ENST00000518359 RICTORQ6R327 1708 aa19.94■□□□□ 0.78
TMEM55A-202ENST00000518359 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
TMEM55A-202ENST00000518359 NUP153P49790 1475 aaKnown RBP19.9■□□□□ 0.78
TMEM55A-202ENST00000518359 FANCAO15360 1455 aa19.89■□□□□ 0.77
TMEM55A-202ENST00000518359 POGZQ7Z3K3 1410 aa19.89■□□□□ 0.77
TMEM55A-202ENST00000518359 AKNAQ7Z591 1439 aa19.86■□□□□ 0.77
TMEM55A-202ENST00000518359 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
TMEM55A-202ENST00000518359 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
TMEM55A-202ENST00000518359 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
TMEM55A-202ENST00000518359 PLEKHD1A6NEE1 506 aa19.84■□□□□ 0.77
TMEM55A-202ENST00000518359 ZFYVE16Q7Z3T8 1539 aa19.84■□□□□ 0.77
TMEM55A-202ENST00000518359 FER1L4A9Z1Z3 1794 aa19.83■□□□□ 0.77
TMEM55A-202ENST00000518359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.81■□□□□ 0.76
TMEM55A-202ENST00000518359 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
TMEM55A-202ENST00000518359 TTC37Q6PGP7 1564 aa19.81■□□□□ 0.76
TMEM55A-202ENST00000518359 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
TMEM55A-202ENST00000518359 HSPA2P54652 639 aa19.79■□□□□ 0.76
TMEM55A-202ENST00000518359 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
TMEM55A-202ENST00000518359 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
TMEM55A-202ENST00000518359 HECW1Q76N89 1606 aa19.76■□□□□ 0.75
TMEM55A-202ENST00000518359 YEATS2Q9ULM3 1422 aa19.76■□□□□ 0.75
TMEM55A-202ENST00000518359 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
TMEM55A-202ENST00000518359 PREX1Q8TCU6 1659 aa19.75■□□□□ 0.75
TMEM55A-202ENST00000518359 CERKQ8TCT0 537 aa19.74■□□□□ 0.75
TMEM55A-202ENST00000518359 EEA1Q15075 1411 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms