RNA–Protein interactions for RNA: ENST00000518284.1

RNF145-204, Transcript of ring finger protein 145, human

TSL 2

Gene RNF145, Length 1,940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF145-204	ENST00000518284	RBM19	Q9Y4C8	960 aa	Known RBP	13.98	□□□□□ -0.17
RNF145-204	ENST00000518284	ZNF326	Q5BKZ1	582 aa	Known RBP	13.94	□□□□□ -0.18
RNF145-204	ENST00000518284	HSP90B1	P14625	803 aa	Known RBP	13.94	□□□□□ -0.18
RNF145-204	ENST00000518284	DHX37	Q8IY37	1157 aa	Known RBP	13.93	□□□□□ -0.18
RNF145-204	ENST00000518284	MROH2B	Q7Z745	1585 aa		13.92	□□□□□ -0.18
RNF145-204	ENST00000518284	KIF21B	O75037	1637 aa		13.9	□□□□□ -0.18
RNF145-204	ENST00000518284	VPS8	Q8N3P4	1428 aa		13.89	□□□□□ -0.19
RNF145-204	ENST00000518284	DHX57	Q6P158	1386 aa	Known RBP	13.88	□□□□□ -0.19
RNF145-204	ENST00000518284	CUX2	O14529	1486 aa		13.88	□□□□□ -0.19
RNF145-204	ENST00000518284	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.88	□□□□□ -0.19
RNF145-204	ENST00000518284	CEP164	Q9UPV0	1460 aa		13.87	□□□□□ -0.19
RNF145-204	ENST00000518284	HMGB1	P09429	215 aa	Known RBP	13.86	□□□□□ -0.19
RNF145-204	ENST00000518284	RSPH4A	Q5TD94	716 aa		13.86	□□□□□ -0.19
RNF145-204	ENST00000518284	CCDC88B	A6NC98	1476 aa		13.86	□□□□□ -0.19
RNF145-204	ENST00000518284	WIZ	O95785	1651 aa		13.85	□□□□□ -0.19
RNF145-204	ENST00000518284	TOP2A	P11388	1531 aa	Known RBP	13.84	□□□□□ -0.19
RNF145-204	ENST00000518284	FKBP8	Q14318	412 aa		13.84	□□□□□ -0.19
RNF145-204	ENST00000518284	NACAD	O15069	1562 aa		13.82	□□□□□ -0.2
RNF145-204	ENST00000518284	CCER2	I3L3R5	266 aa		13.82	□□□□□ -0.2
RNF145-204	ENST00000518284	CECR2	Q9BXF3	1484 aa		13.81	□□□□□ -0.2
RNF145-204	ENST00000518284	ABCC8	Q09428	1581 aa		13.81	□□□□□ -0.2
RNF145-204	ENST00000518284	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.8	□□□□□ -0.2
RNF145-204	ENST00000518284	AAMP	Q13685	434 aa		13.8	□□□□□ -0.2
RNF145-204	ENST00000518284	SOGA1	O94964	1423 aa		13.78	□□□□□ -0.2
RNF145-204	ENST00000518284	CLIP1	P30622	1438 aa		13.78	□□□□□ -0.2
RNF145-204	ENST00000518284	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
RNF145-204	ENST00000518284	RSPH6A	Q9H0K4	717 aa		13.78	□□□□□ -0.2
RNF145-204	ENST00000518284	MSH5	O43196	834 aa		13.77	□□□□□ -0.21
RNF145-204	ENST00000518284	UBTF	P17480	764 aa	Known RBP	13.76	□□□□□ -0.21
RNF145-204	ENST00000518284	FOXD1	Q16676	465 aa		13.73	□□□□□ -0.21
RNF145-204	ENST00000518284	GLIPR1L2	Q4G1C9	344 aa		13.73	□□□□□ -0.21
RNF145-204	ENST00000518284	RRBP1	Q9P2E9	1410 aa	Known RBP	13.73	□□□□□ -0.21
RNF145-204	ENST00000518284	SALL2	Q9Y467	1007 aa	Predicted RBP	13.72	□□□□□ -0.21
RNF145-204	ENST00000518284	SMARCA2	P51531	1590 aa		13.71	□□□□□ -0.21
RNF145-204	ENST00000518284	DEK	P35659	375 aa	Known RBP	13.7	□□□□□ -0.22
RNF145-204	ENST00000518284	VSIG10	Q8N0Z9	540 aa		13.65	□□□□□ -0.22
RNF145-204	ENST00000518284	CCDC136	Q96JN2	1154 aa		13.64	□□□□□ -0.23
RNF145-204	ENST00000518284	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.64	□□□□□ -0.23
RNF145-204	ENST00000518284	RUSC2	Q8N2Y8	1516 aa		13.61	□□□□□ -0.23
RNF145-204	ENST00000518284		A0A0U1RQG5	324 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF145-204	ENST00000518284	PPP1R15A	O75807	674 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF145-204	ENST00000518284	RBM10	P98175	930 aa	Known RBP	13.59	□□□□□ -0.23
RNF145-204	ENST00000518284	ERICH3	Q5RHP9	1530 aa		13.58	□□□□□ -0.24
RNF145-204	ENST00000518284	ANP32C	O43423	234 aa		13.58	□□□□□ -0.24
RNF145-204	ENST00000518284	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.58	□□□□□ -0.24
RNF145-204	ENST00000518284	PPP4R2	Q9NY27	417 aa		13.56	□□□□□ -0.24
RNF145-204	ENST00000518284	SMARCA4	P51532	1647 aa		13.56	□□□□□ -0.24
RNF145-204	ENST00000518284	POLR3GL	Q9BT43	218 aa		13.56	□□□□□ -0.24
RNF145-204	ENST00000518284	MAPKBP1	O60336	1514 aa		13.54	□□□□□ -0.24
RNF145-204	ENST00000518284	IGSF3	O75054	1194 aa		13.54	□□□□□ -0.24
RNF145-204	ENST00000518284	NOP58	Q9Y2X3	529 aa	Known RBP	13.54	□□□□□ -0.24
RNF145-204	ENST00000518284	KCNH8	Q96L42	1107 aa		13.54	□□□□□ -0.24
RNF145-204	ENST00000518284	SYNJ1	O43426	1573 aa		13.53	□□□□□ -0.24
RNF145-204	ENST00000518284	CCDC9	Q9Y3X0	531 aa	Known RBP	13.53	□□□□□ -0.24
RNF145-204	ENST00000518284	CCNB3	Q8WWL7	1395 aa		13.53	□□□□□ -0.24
RNF145-204	ENST00000518284	PUS7	Q96PZ0	661 aa	Known RBP	13.52	□□□□□ -0.24
RNF145-204	ENST00000518284	MAP3K1	Q13233	1512 aa		13.52	□□□□□ -0.25
RNF145-204	ENST00000518284	ITGAE	P38570	1179 aa		13.5	□□□□□ -0.25
RNF145-204	ENST00000518284	RTL5	Q5HYW3	569 aa	Predicted RBP	13.48	□□□□□ -0.25
RNF145-204	ENST00000518284	USP35	Q9P2H5	1018 aa		13.47	□□□□□ -0.25
RNF145-204	ENST00000518284	ARAP1	Q96P48	1450 aa		13.47	□□□□□ -0.25
RNF145-204	ENST00000518284	DDX10	Q13206	875 aa	Known RBP	13.47	□□□□□ -0.25
RNF145-204	ENST00000518284	RAPGEF2	Q9Y4G8	1499 aa		13.46	□□□□□ -0.25
RNF145-204	ENST00000518284	WDR97	A6NE52	1622 aa		13.45	□□□□□ -0.26
RNF145-204	ENST00000518284	SETD5	Q9C0A6	1442 aa		13.45	□□□□□ -0.26
RNF145-204	ENST00000518284	C11orf95	C9JLR9	678 aa	Predicted RBP	13.45	□□□□□ -0.26
RNF145-204	ENST00000518284	ZMYND15	Q9H091	742 aa		13.45	□□□□□ -0.26
RNF145-204	ENST00000518284	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.44	□□□□□ -0.26
RNF145-204	ENST00000518284	RAB3GAP2	Q9H2M9	1393 aa		13.44	□□□□□ -0.26
RNF145-204	ENST00000518284	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
RNF145-204	ENST00000518284	PEG3	Q9GZU2	1588 aa		13.42	□□□□□ -0.26
RNF145-204	ENST00000518284	PRX	Q9BXM0	1461 aa		13.41	□□□□□ -0.26
RNF145-204	ENST00000518284	TICAM2	Q86XR7	235 aa		13.41	□□□□□ -0.26
RNF145-204	ENST00000518284	TRIM52	Q96A61	297 aa		13.41	□□□□□ -0.26
RNF145-204	ENST00000518284	WASHC2A	Q641Q2	1341 aa		13.4	□□□□□ -0.26
RNF145-204	ENST00000518284	ANP32A	P39687	249 aa	Known RBP	13.4	□□□□□ -0.26
RNF145-204	ENST00000518284	IPO9	Q96P70	1041 aa	Known RBP	13.4	□□□□□ -0.26
RNF145-204	ENST00000518284	DNAJC5	Q9H3Z4	198 aa		13.4	□□□□□ -0.26
RNF145-204	ENST00000518284	ARID3A	Q99856	593 aa		13.37	□□□□□ -0.27
RNF145-204	ENST00000518284	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
RNF145-204	ENST00000518284	WASHC2C	Q9Y4E1	1318 aa		13.35	□□□□□ -0.27
RNF145-204	ENST00000518284	FHAD1	B1AJZ9	1412 aa		13.35	□□□□□ -0.27
RNF145-204	ENST00000518284	NCAPD3	P42695	1498 aa		13.35	□□□□□ -0.27
RNF145-204	ENST00000518284	TOP2B	Q02880	1626 aa		13.35	□□□□□ -0.27
RNF145-204	ENST00000518284	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.34	□□□□□ -0.27
RNF145-204	ENST00000518284	CLSTN1	O94985	981 aa		13.33	□□□□□ -0.28
RNF145-204	ENST00000518284	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.33	□□□□□ -0.28
RNF145-204	ENST00000518284	KDM2A	Q9Y2K7	1162 aa		13.33	□□□□□ -0.28
RNF145-204	ENST00000518284	NCL	P19338	710 aa	Known RBP	13.32	□□□□□ -0.28
RNF145-204	ENST00000518284	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
RNF145-204	ENST00000518284	KANK4	Q5T7N3	995 aa	Predicted RBP	13.32	□□□□□ -0.28
RNF145-204	ENST00000518284	BIVM-ERCC5	R4GMW8	1640 aa		13.32	□□□□□ -0.28
RNF145-204	ENST00000518284	ZBED9	Q6R2W3	1325 aa		13.31	□□□□□ -0.28
RNF145-204	ENST00000518284	IRX6	P78412	446 aa	Predicted RBP	13.3	□□□□□ -0.28
RNF145-204	ENST00000518284	PPM1G	O15355	546 aa	Predicted RBP	13.29	□□□□□ -0.28
RNF145-204	ENST00000518284	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.29	□□□□□ -0.28
RNF145-204	ENST00000518284	TIAM1	Q13009	1591 aa		13.29	□□□□□ -0.28
RNF145-204	ENST00000518284	NBR1	Q14596	966 aa		13.29	□□□□□ -0.28
RNF145-204	ENST00000518284	PPP4R3CP	Q6ZMV5	832 aa		13.28	□□□□□ -0.28
RNF145-204	ENST00000518284	TEX2	Q8IWB9	1127 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms