RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 TTBK1Q5TCY1 1321 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF11B-202ENST00000517352 PRG4Q92954 1404 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF11B-202ENST00000517352 ADRA2BP18089 450 aa12.77□□□□□ -0.37
TNFRSF11B-202ENST00000517352 NUP160Q12769 1436 aa12.77□□□□□ -0.37
TNFRSF11B-202ENST00000517352 ADAMTS12P58397 1594 aa12.77□□□□□ -0.37
TNFRSF11B-202ENST00000517352 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
TNFRSF11B-202ENST00000517352 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
TNFRSF11B-202ENST00000517352 FAM69CQ0P6D2 419 aa12.74□□□□□ -0.37
TNFRSF11B-202ENST00000517352 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
TNFRSF11B-202ENST00000517352 ERCC6L2Q5T890 1561 aa12.72□□□□□ -0.37
TNFRSF11B-202ENST00000517352 KIF27Q86VH2 1401 aa12.71□□□□□ -0.38
TNFRSF11B-202ENST00000517352 IGF1RP08069 1367 aa12.64□□□□□ -0.39
TNFRSF11B-202ENST00000517352 SHROOM2Q13796 1616 aa12.62□□□□□ -0.39
TNFRSF11B-202ENST00000517352 FAM9AQ8IZU1 332 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF11B-202ENST00000517352 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
TNFRSF11B-202ENST00000517352 PTPRGP23470 1445 aa12.62□□□□□ -0.39
TNFRSF11B-202ENST00000517352 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
TNFRSF11B-202ENST00000517352 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
TNFRSF11B-202ENST00000517352 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
TNFRSF11B-202ENST00000517352 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
TNFRSF11B-202ENST00000517352 TNIKQ9UKE5 1360 aa12.55□□□□□ -0.4
TNFRSF11B-202ENST00000517352 CUL7Q14999 1698 aa12.54□□□□□ -0.4
TNFRSF11B-202ENST00000517352 MAPKBP1O60336 1514 aa12.52□□□□□ -0.41
TNFRSF11B-202ENST00000517352 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
TNFRSF11B-202ENST00000517352 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.41
TNFRSF11B-202ENST00000517352 KDM6BO15054 1643 aa12.46□□□□□ -0.41
TNFRSF11B-202ENST00000517352 DIP2BQ9P265 1576 aa12.46□□□□□ -0.42
TNFRSF11B-202ENST00000517352 KIF13AQ9H1H9 1805 aa12.46□□□□□ -0.42
TNFRSF11B-202ENST00000517352 ASXL2Q76L83 1435 aa12.45□□□□□ -0.42
TNFRSF11B-202ENST00000517352 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
TNFRSF11B-202ENST00000517352 IQGAP2Q13576 1575 aa12.45□□□□□ -0.42
TNFRSF11B-202ENST00000517352 ABCC2Q92887 1545 aa12.45□□□□□ -0.42
TNFRSF11B-202ENST00000517352 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
TNFRSF11B-202ENST00000517352 KCNH8Q96L42 1107 aa12.44□□□□□ -0.42
TNFRSF11B-202ENST00000517352 TSPOAP1O95153 1857 aa12.41□□□□□ -0.42
TNFRSF11B-202ENST00000517352 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
TNFRSF11B-202ENST00000517352 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
TNFRSF11B-202ENST00000517352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF11B-202ENST00000517352 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
TNFRSF11B-202ENST00000517352 ARID3CA6NKF2 412 aa12.38□□□□□ -0.43
TNFRSF11B-202ENST00000517352 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
TNFRSF11B-202ENST00000517352 TEX14Q8IWB6 1497 aa12.38□□□□□ -0.43
TNFRSF11B-202ENST00000517352 P3H3Q8IVL6 736 aa12.37□□□□□ -0.43
TNFRSF11B-202ENST00000517352 GOLGA3Q08378 1498 aa12.37□□□□□ -0.43
TNFRSF11B-202ENST00000517352 RANGAP1P46060 587 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11B-202ENST00000517352 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
TNFRSF11B-202ENST00000517352 EPRSP07814 1512 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11B-202ENST00000517352 UGGT2Q9NYU1 1516 aa12.33□□□□□ -0.44
TNFRSF11B-202ENST00000517352 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
TNFRSF11B-202ENST00000517352 GLI2P10070 1586 aa12.31□□□□□ -0.44
TNFRSF11B-202ENST00000517352 CD109Q6YHK3 1445 aa12.3□□□□□ -0.44
TNFRSF11B-202ENST00000517352 WDR7Q9Y4E6 1490 aa12.3□□□□□ -0.44
TNFRSF11B-202ENST00000517352 KIAA0556O60303 1618 aa12.29□□□□□ -0.44
TNFRSF11B-202ENST00000517352 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
TNFRSF11B-202ENST00000517352 ADGRL1O94910 1474 aa12.27□□□□□ -0.44
TNFRSF11B-202ENST00000517352 ZCCHC11Q5TAX3 1644 aaKnown RBP12.26□□□□□ -0.45
TNFRSF11B-202ENST00000517352 ARID4BQ4LE39 1312 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF11B-202ENST00000517352 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF11B-202ENST00000517352 COL17A1Q9UMD9 1497 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF11B-202ENST00000517352 PLEKHD1A6NEE1 506 aa12.22□□□□□ -0.45
TNFRSF11B-202ENST00000517352 PRXQ9BXM0 1461 aa12.21□□□□□ -0.45
TNFRSF11B-202ENST00000517352 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
TNFRSF11B-202ENST00000517352 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.46
TNFRSF11B-202ENST00000517352 CTTNBP2Q8WZ74 1663 aa12.19□□□□□ -0.46
TNFRSF11B-202ENST00000517352 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF11B-202ENST00000517352 MAGI3Q5TCQ9 1506 aa12.19□□□□□ -0.46
TNFRSF11B-202ENST00000517352 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
TNFRSF11B-202ENST00000517352 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
TNFRSF11B-202ENST00000517352 PPRC1Q5VV67 1664 aaKnown RBP12.17□□□□□ -0.46
TNFRSF11B-202ENST00000517352 RAPGEF3O95398 923 aa12.17□□□□□ -0.46
TNFRSF11B-202ENST00000517352 ABCA8O94911 1581 aa12.17□□□□□ -0.46
TNFRSF11B-202ENST00000517352 ATP10BO94823 1461 aa12.15□□□□□ -0.46
TNFRSF11B-202ENST00000517352 EEA1Q15075 1411 aa12.14□□□□□ -0.47
TNFRSF11B-202ENST00000517352 CFAP43Q8NDM7 1665 aa12.14□□□□□ -0.47
TNFRSF11B-202ENST00000517352 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
TNFRSF11B-202ENST00000517352 CDK11AQ9UQ88 783 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF11B-202ENST00000517352 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
TNFRSF11B-202ENST00000517352 ARAP3Q8WWN8 1544 aa12.09□□□□□ -0.47
TNFRSF11B-202ENST00000517352 HECW2Q9P2P5 1572 aa12.08□□□□□ -0.48
TNFRSF11B-202ENST00000517352 NEO1Q92859 1461 aa12.08□□□□□ -0.48
TNFRSF11B-202ENST00000517352 MLECQ14165 292 aa12.07□□□□□ -0.48
TNFRSF11B-202ENST00000517352 RAPGEF6Q8TEU7 1601 aa12.07□□□□□ -0.48
TNFRSF11B-202ENST00000517352 POGZQ7Z3K3 1410 aa12.05□□□□□ -0.48
TNFRSF11B-202ENST00000517352 DENND4BO75064 1496 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF11B-202ENST00000517352 KIF21BO75037 1637 aa12.04□□□□□ -0.48
TNFRSF11B-202ENST00000517352 NUP153P49790 1475 aaKnown RBP12.03□□□□□ -0.48
TNFRSF11B-202ENST00000517352 AKNAQ7Z591 1439 aa12.03□□□□□ -0.48
TNFRSF11B-202ENST00000517352 FANCAO15360 1455 aa12.02□□□□□ -0.48
TNFRSF11B-202ENST00000517352 SAMD9Q5K651 1589 aa12.02□□□□□ -0.49
TNFRSF11B-202ENST00000517352 ABCA9Q8IUA7 1624 aa12.02□□□□□ -0.49
TNFRSF11B-202ENST00000517352 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.49
TNFRSF11B-202ENST00000517352 ESF1Q9H501 851 aaKnown RBP12.02□□□□□ -0.49
TNFRSF11B-202ENST00000517352 PTPRMP28827 1452 aa12.02□□□□□ -0.49
TNFRSF11B-202ENST00000517352 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
TNFRSF11B-202ENST00000517352 FBXO41Q8TF61 875 aa11.99□□□□□ -0.49
TNFRSF11B-202ENST00000517352 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
TNFRSF11B-202ENST00000517352 SCAPERQ9BY12 1400 aa11.97□□□□□ -0.49
TNFRSF11B-202ENST00000517352 CLIP1P30622 1438 aa11.96□□□□□ -0.49
TNFRSF11B-202ENST00000517352 HSPA2P54652 639 aa11.95□□□□□ -0.5
TNFRSF11B-202ENST00000517352 CFAP74Q9C0B2 1584 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms