RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 DIP2BQ9P265 1576 aa4.44□□□□□ -1.7
RNU6-548P-201ENST00000517083 SMARCA4P51532 1647 aa4.44□□□□□ -1.7
RNU6-548P-201ENST00000517083 POTEAQ6S8J7 498 aa4.44□□□□□ -1.7
RNU6-548P-201ENST00000517083 CHD1O14646 1710 aa4.43□□□□□ -1.7
RNU6-548P-201ENST00000517083 IQSEC2Q5JU85 1478 aa4.43□□□□□ -1.7
RNU6-548P-201ENST00000517083 PLPPR3Q6T4P5 718 aa4.43□□□□□ -1.7
RNU6-548P-201ENST00000517083 PIAS4Q8N2W9 510 aaPredicted RBP4.43□□□□□ -1.7
RNU6-548P-201ENST00000517083 SYNJ1O43426 1573 aa4.43□□□□□ -1.7
RNU6-548P-201ENST00000517083 EIF4G3O43432 1585 aaKnown RBP4.42□□□□□ -1.7
RNU6-548P-201ENST00000517083 YY1P25490 414 aa4.42□□□□□ -1.7
RNU6-548P-201ENST00000517083 PIP4K2BP78356 416 aa4.42□□□□□ -1.7
RNU6-548P-201ENST00000517083 MAPKBP1O60336 1514 aa4.41□□□□□ -1.7
RNU6-548P-201ENST00000517083 YEATS2Q9ULM3 1422 aa4.4□□□□□ -1.7
RNU6-548P-201ENST00000517083 ZRANB1Q9UGI0 708 aa4.38□□□□□ -1.71
RNU6-548P-201ENST00000517083 CAPN15O75808 1086 aa4.37□□□□□ -1.71
RNU6-548P-201ENST00000517083 POTEHQ6S545 545 aa4.36□□□□□ -1.71
RNU6-548P-201ENST00000517083 TDRD9Q8NDG6 1382 aaKnown RBP4.33□□□□□ -1.72
RNU6-548P-201ENST00000517083 ARID4BQ4LE39 1312 aaPredicted RBP4.32□□□□□ -1.72
RNU6-548P-201ENST00000517083 TOM1O60784 492 aa4.32□□□□□ -1.72
RNU6-548P-201ENST00000517083 SETBP1Q9Y6X0 1596 aa4.31□□□□□ -1.72
RNU6-548P-201ENST00000517083 ZNF335Q9H4Z2 1342 aaPredicted RBP4.31□□□□□ -1.72
RNU6-548P-201ENST00000517083 C1QTNF8P60827 252 aa4.31□□□□□ -1.72
RNU6-548P-201ENST00000517083 TRIM52Q96A61 297 aa4.31□□□□□ -1.72
RNU6-548P-201ENST00000517083 TEX14Q8IWB6 1497 aa4.3□□□□□ -1.72
RNU6-548P-201ENST00000517083 MAGI1Q96QZ7 1491 aaPredicted RBP4.3□□□□□ -1.72
RNU6-548P-201ENST00000517083 TSPOAP1O95153 1857 aa4.29□□□□□ -1.72
RNU6-548P-201ENST00000517083 CFTRP13569 1480 aa4.29□□□□□ -1.72
RNU6-548P-201ENST00000517083 ADAMTSL3P82987 1691 aa4.29□□□□□ -1.72
RNU6-548P-201ENST00000517083 CEP170Q5SW79 1584 aa4.28□□□□□ -1.72
RNU6-548P-201ENST00000517083 SETD1AO15047 1707 aaKnown RBP4.28□□□□□ -1.72
RNU6-548P-201ENST00000517083 PRELPP51888 382 aa4.27□□□□□ -1.73
RNU6-548P-201ENST00000517083 KIF21BO75037 1637 aa4.27□□□□□ -1.73
RNU6-548P-201ENST00000517083 TOPBP1Q92547 1522 aa4.26□□□□□ -1.73
RNU6-548P-201ENST00000517083 DCAF1Q9Y4B6 1507 aa4.26□□□□□ -1.73
RNU6-548P-201ENST00000517083 PRG4Q92954 1404 aaPredicted RBP4.26□□□□□ -1.73
RNU6-548P-201ENST00000517083 MADDQ8WXG6 1647 aa4.25□□□□□ -1.73
RNU6-548P-201ENST00000517083 PPP6R1Q9UPN7 881 aa4.25□□□□□ -1.73
RNU6-548P-201ENST00000517083 PLB1Q6P1J6 1458 aa4.24□□□□□ -1.73
RNU6-548P-201ENST00000517083 ZNF784Q8NCA9 323 aaPredicted RBP4.24□□□□□ -1.73
RNU6-548P-201ENST00000517083 PPRC1Q5VV67 1664 aaKnown RBP4.23□□□□□ -1.73
RNU6-548P-201ENST00000517083 ASXL2Q76L83 1435 aa4.23□□□□□ -1.73
RNU6-548P-201ENST00000517083 GRIN2BQ13224 1484 aa4.23□□□□□ -1.73
RNU6-548P-201ENST00000517083 GLI2P10070 1586 aa4.23□□□□□ -1.73
RNU6-548P-201ENST00000517083 UHRF1BP1Q6BDS2 1440 aa4.21□□□□□ -1.73
RNU6-548P-201ENST00000517083 TARBP1Q13395 1621 aaKnown RBP4.21□□□□□ -1.73
RNU6-548P-201ENST00000517083 ADCY10Q96PN6 1610 aa4.21□□□□□ -1.73
RNU6-548P-201ENST00000517083 RAD54L2Q9Y4B4 1467 aa4.21□□□□□ -1.74
RNU6-548P-201ENST00000517083 MROH2BQ7Z745 1585 aa4.21□□□□□ -1.74
RNU6-548P-201ENST00000517083 CFAP43Q8NDM7 1665 aa4.2□□□□□ -1.74
RNU6-548P-201ENST00000517083 PEG3Q9GZU2 1588 aa4.2□□□□□ -1.74
RNU6-548P-201ENST00000517083 JPH4Q96JJ6 628 aa4.2□□□□□ -1.74
RNU6-548P-201ENST00000517083 NUP160Q12769 1436 aa4.2□□□□□ -1.74
RNU6-548P-201ENST00000517083 CEP350Q5VT06 3117 aa4.19□□□□□ -1.74
RNU6-548P-201ENST00000517083 ZCCHC6Q5VYS8 1495 aaKnown RBP4.19□□□□□ -1.74
RNU6-548P-201ENST00000517083 RXRBP28702 533 aa4.19□□□□□ -1.74
RNU6-548P-201ENST00000517083 CEBPAP49715 358 aaPredicted RBP4.19□□□□□ -1.74
RNU6-548P-201ENST00000517083 TNS4Q8IZW8 715 aa4.19□□□□□ -1.74
RNU6-548P-201ENST00000517083 SOGA1O94964 1423 aa4.19□□□□□ -1.74
RNU6-548P-201ENST00000517083 NCOA1Q15788 1441 aa4.19□□□□□ -1.74
RNU6-548P-201ENST00000517083 POLA1P09884 1462 aaPredicted RBP4.18□□□□□ -1.74
RNU6-548P-201ENST00000517083 STRCQ7RTU9 1775 aa4.18□□□□□ -1.74
RNU6-548P-201ENST00000517083 EPRSP07814 1512 aaKnown RBP4.18□□□□□ -1.74
RNU6-548P-201ENST00000517083 KIAA0586Q9BVV6 1533 aa4.18□□□□□ -1.74
RNU6-548P-201ENST00000517083 COL13A1Q5TAT6 717 aaPredicted RBP4.18□□□□□ -1.74
RNU6-548P-201ENST00000517083 PTPRKQ15262 1439 aa4.18□□□□□ -1.74
RNU6-548P-201ENST00000517083 ABCC8Q09428 1581 aa4.18□□□□□ -1.74
RNU6-548P-201ENST00000517083 NUTM2BA6NNL0 878 aaPredicted RBP4.17□□□□□ -1.74
RNU6-548P-201ENST00000517083 NUTM2EB1AL46 878 aaPredicted RBP4.17□□□□□ -1.74
RNU6-548P-201ENST00000517083 NUTM2DQ5VT03 806 aaPredicted RBP4.17□□□□□ -1.74
RNU6-548P-201ENST00000517083 ZNF772Q68DY9 489 aaPredicted RBP4.17□□□□□ -1.74
RNU6-548P-201ENST00000517083 NUTM2AQ8IVF1 878 aaPredicted RBP4.17□□□□□ -1.74
RNU6-548P-201ENST00000517083 RIMS1Q86UR5 1692 aaKnown RBP4.16□□□□□ -1.74
RNU6-548P-201ENST00000517083 BCORL1Q5H9F3 1711 aa4.16□□□□□ -1.74
RNU6-548P-201ENST00000517083 MLECQ14165 292 aa4.16□□□□□ -1.74
RNU6-548P-201ENST00000517083 GRIN2AQ12879 1464 aa4.16□□□□□ -1.74
RNU6-548P-201ENST00000517083 NCKAP5LQ9HCH0 1330 aa4.16□□□□□ -1.74
RNU6-548P-201ENST00000517083 DCAF8L1A6NGE4 600 aa4.15□□□□□ -1.75
RNU6-548P-201ENST00000517083 GIGYF1O75420 1035 aaPredicted RBP4.15□□□□□ -1.75
RNU6-548P-201ENST00000517083 EHMT2Q96KQ7 1210 aa4.15□□□□□ -1.75
RNU6-548P-201ENST00000517083 KIAA0556O60303 1618 aa4.14□□□□□ -1.75
RNU6-548P-201ENST00000517083 LRP5O75197 1615 aa4.14□□□□□ -1.75
RNU6-548P-201ENST00000517083 SHROOM2Q13796 1616 aa4.14□□□□□ -1.75
RNU6-548P-201ENST00000517083 POGZQ7Z3K3 1410 aa4.14□□□□□ -1.75
RNU6-548P-201ENST00000517083 RAPGEF3O95398 923 aa4.14□□□□□ -1.75
RNU6-548P-201ENST00000517083 ABCC2Q92887 1545 aa4.14□□□□□ -1.75
RNU6-548P-201ENST00000517083 ATAD2Q6PL18 1390 aa4.14□□□□□ -1.75
RNU6-548P-201ENST00000517083 CDK12Q9NYV4 1490 aaPredicted RBP4.13□□□□□ -1.75
RNU6-548P-201ENST00000517083 LRRC7Q96NW7 1537 aa4.13□□□□□ -1.75
RNU6-548P-201ENST00000517083 HRCP23327 699 aa4.13□□□□□ -1.75
RNU6-548P-201ENST00000517083 DNMBPQ6XZF7 1577 aa4.13□□□□□ -1.75
RNU6-548P-201ENST00000517083 TTBK1Q5TCY1 1321 aaPredicted RBP4.13□□□□□ -1.75
RNU6-548P-201ENST00000517083 MAP3K4Q9Y6R4 1608 aa4.13□□□□□ -1.75
RNU6-548P-201ENST00000517083 CD109Q6YHK3 1445 aa4.12□□□□□ -1.75
RNU6-548P-201ENST00000517083 PSDA5PKW4 1024 aaPredicted RBP4.12□□□□□ -1.75
RNU6-548P-201ENST00000517083 MEX3CQ5U5Q3 659 aaKnown RBP4.12□□□□□ -1.75
RNU6-548P-201ENST00000517083 CUX1P39880 1505 aa4.11□□□□□ -1.75
RNU6-548P-201ENST00000517083 MAGI3Q5TCQ9 1506 aa4.11□□□□□ -1.75
RNU6-548P-201ENST00000517083 ALKQ9UM73 1620 aa4.11□□□□□ -1.75
RNU6-548P-201ENST00000517083 RGS12O14924 1447 aa4.11□□□□□ -1.75
RNU6-548P-201ENST00000517083 MPNDQ8N594 471 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms