RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	BAZ1B	Q9UIG0	1483 aa	Known RBP	6.63	□□□□□ -1.35
SLC38A9-223	ENST00000515629	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	6.61	□□□□□ -1.35
SLC38A9-223	ENST00000515629	THOC2	Q8NI27	1593 aa	Known RBP	6.59	□□□□□ -1.35
SLC38A9-223	ENST00000515629	PEG3	Q9GZU2	1588 aa		6.59	□□□□□ -1.35
SLC38A9-223	ENST00000515629	LAMC3	Q9Y6N6	1575 aa		6.58	□□□□□ -1.36
SLC38A9-223	ENST00000515629	CDK11B	P21127	795 aa	Known RBP	6.58	□□□□□ -1.36
SLC38A9-223	ENST00000515629	CDK11A	Q9UQ88	783 aa	Predicted RBP	6.58	□□□□□ -1.36
SLC38A9-223	ENST00000515629	MROH2B	Q7Z745	1585 aa		6.58	□□□□□ -1.36
SLC38A9-223	ENST00000515629	CHMP4A	Q9BY43	222 aa		6.58	□□□□□ -1.36
SLC38A9-223	ENST00000515629	IGSF3	O75054	1194 aa		6.57	□□□□□ -1.36
SLC38A9-223	ENST00000515629	ARID3A	Q99856	593 aa		6.57	□□□□□ -1.36
SLC38A9-223	ENST00000515629	CCDC9	Q9Y3X0	531 aa	Known RBP	6.57	□□□□□ -1.36
SLC38A9-223	ENST00000515629	BBX	Q8WY36	941 aa	Predicted RBP	6.57	□□□□□ -1.36
SLC38A9-223	ENST00000515629	NPM1	P06748	294 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
SLC38A9-223	ENST00000515629	PKD2	Q13563	968 aa		6.56	□□□□□ -1.36
SLC38A9-223	ENST00000515629	PDS5B	Q9NTI5	1447 aa		6.56	□□□□□ -1.36
SLC38A9-223	ENST00000515629	KIF21A	Q7Z4S6	1674 aa		6.55	□□□□□ -1.36
SLC38A9-223	ENST00000515629	PDIA4	P13667	645 aa	Known RBP	6.53	□□□□□ -1.36
SLC38A9-223	ENST00000515629	CADPS	Q9ULU8	1353 aa		6.53	□□□□□ -1.36
SLC38A9-223	ENST00000515629	POTEH	Q6S545	545 aa		6.52	□□□□□ -1.37
SLC38A9-223	ENST00000515629	TRIM41	Q8WV44	630 aa		6.52	□□□□□ -1.37
SLC38A9-223	ENST00000515629	ATF5	Q9Y2D1	282 aa	Predicted RBP	6.52	□□□□□ -1.37
SLC38A9-223	ENST00000515629	TRH	P20396	242 aa	Predicted RBP	6.52	□□□□□ -1.37
SLC38A9-223	ENST00000515629	MRC2	Q9UBG0	1479 aa		6.5	□□□□□ -1.37
SLC38A9-223	ENST00000515629	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	6.5	□□□□□ -1.37
SLC38A9-223	ENST00000515629	HNRNPUL2	Q1KMD3	747 aa	Known RBP	6.5	□□□□□ -1.37
SLC38A9-223	ENST00000515629	SAMD1	Q6SPF0	538 aa	Predicted RBP	6.5	□□□□□ -1.37
SLC38A9-223	ENST00000515629	SPRYD3	Q8NCJ5	442 aa		6.49	□□□□□ -1.37
SLC38A9-223	ENST00000515629	WDR62	O43379	1518 aa		6.49	□□□□□ -1.37
SLC38A9-223	ENST00000515629	WIZ	O95785	1651 aa		6.48	□□□□□ -1.37
SLC38A9-223	ENST00000515629	ZBTB7C	A1YPR0	619 aa		6.48	□□□□□ -1.37
SLC38A9-223	ENST00000515629	DHX37	Q8IY37	1157 aa	Known RBP	6.47	□□□□□ -1.37
SLC38A9-223	ENST00000515629	CEP164	Q9UPV0	1460 aa		6.46	□□□□□ -1.37
SLC38A9-223	ENST00000515629	HSP90B1	P14625	803 aa	Known RBP	6.46	□□□□□ -1.37
SLC38A9-223	ENST00000515629	BRPF1	P55201	1214 aa	Predicted RBP	6.46	□□□□□ -1.38
SLC38A9-223	ENST00000515629		U3KPZ7	1027 aa	Predicted RBP	6.46	□□□□□ -1.38
SLC38A9-223	ENST00000515629	NECTIN2	Q92692	538 aa		6.45	□□□□□ -1.38
SLC38A9-223	ENST00000515629	FANCD2	Q9BXW9	1451 aa		6.45	□□□□□ -1.38
SLC38A9-223	ENST00000515629	DCAF8L1	A6NGE4	600 aa		6.44	□□□□□ -1.38
SLC38A9-223	ENST00000515629	HMGB1	P09429	215 aa	Known RBP	6.44	□□□□□ -1.38
SLC38A9-223	ENST00000515629	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	6.44	□□□□□ -1.38
SLC38A9-223	ENST00000515629	IFNLR1	Q8IU57	520 aa	Predicted RBP	6.44	□□□□□ -1.38
SLC38A9-223	ENST00000515629	CFTR	P13569	1480 aa		6.44	□□□□□ -1.38
SLC38A9-223	ENST00000515629	OSCAR	Q8IYS5	282 aa		6.43	□□□□□ -1.38
SLC38A9-223	ENST00000515629	UBE2Q2	Q8WVN8	375 aa		6.43	□□□□□ -1.38
SLC38A9-223	ENST00000515629	RSF1	Q96T23	1441 aa	Predicted RBP	6.41	□□□□□ -1.38
SLC38A9-223	ENST00000515629	VASP	P50552	380 aa	Predicted RBP	6.41	□□□□□ -1.38
SLC38A9-223	ENST00000515629	URB2	Q14146	1524 aa	Known RBP	6.4	□□□□□ -1.38
SLC38A9-223	ENST00000515629	C1orf115	Q9H7X2	142 aa		6.4	□□□□□ -1.38
SLC38A9-223	ENST00000515629	TOP2A	P11388	1531 aa	Known RBP	6.39	□□□□□ -1.39
SLC38A9-223	ENST00000515629	BRD2	P25440	801 aa	Known RBP	6.38	□□□□□ -1.39
SLC38A9-223	ENST00000515629	RSPH6A	Q9H0K4	717 aa		6.38	□□□□□ -1.39
SLC38A9-223	ENST00000515629	ZMYND15	Q9H091	742 aa		6.37	□□□□□ -1.39
SLC38A9-223	ENST00000515629	ZNF219	Q9P2Y4	722 aa	Predicted RBP	6.37	□□□□□ -1.39
SLC38A9-223	ENST00000515629	FAM9A	Q8IZU1	332 aa	Predicted RBP	6.36	□□□□□ -1.39
SLC38A9-223	ENST00000515629	NEUROD2	Q15784	382 aa		6.36	□□□□□ -1.39
SLC38A9-223	ENST00000515629	POLR3GL	Q9BT43	218 aa		6.36	□□□□□ -1.39
SLC38A9-223	ENST00000515629	ARID3C	A6NKF2	412 aa		6.35	□□□□□ -1.39
SLC38A9-223	ENST00000515629	PROM2	Q8N271	834 aa		6.35	□□□□□ -1.39
SLC38A9-223	ENST00000515629	BCL11A	Q9H165	835 aa		6.35	□□□□□ -1.39
SLC38A9-223	ENST00000515629	ZNF608	Q9ULD9	1512 aa	Predicted RBP	6.35	□□□□□ -1.39
SLC38A9-223	ENST00000515629	PUS7	Q96PZ0	661 aa	Known RBP	6.35	□□□□□ -1.39
SLC38A9-223	ENST00000515629	PDE4C	Q08493	712 aa		6.34	□□□□□ -1.39
SLC38A9-223	ENST00000515629	ZNF428	Q96B54	188 aa		6.34	□□□□□ -1.39
SLC38A9-223	ENST00000515629	ECM2	O94769	699 aa	Predicted RBP	6.34	□□□□□ -1.39
SLC38A9-223	ENST00000515629	KCTD17	Q8N5Z5	321 aa		6.34	□□□□□ -1.39
SLC38A9-223	ENST00000515629	RAD21	O60216	631 aa		6.33	□□□□□ -1.4
SLC38A9-223	ENST00000515629	CCDC88B	A6NC98	1476 aa		6.33	□□□□□ -1.4
SLC38A9-223	ENST00000515629	IFT140	Q96RY7	1462 aa		6.33	□□□□□ -1.4
SLC38A9-223	ENST00000515629	RIMBP3C	A6NJZ7	1639 aa		6.33	□□□□□ -1.4
SLC38A9-223	ENST00000515629	RIMBP3B	A6NNM3	1639 aa		6.33	□□□□□ -1.4
SLC38A9-223	ENST00000515629	RIMBP3	Q9UFD9	1639 aa		6.33	□□□□□ -1.4
SLC38A9-223	ENST00000515629	ARHGEF11	O15085	1522 aa		6.32	□□□□□ -1.4
SLC38A9-223	ENST00000515629	PRDM2	Q13029	1718 aa		6.32	□□□□□ -1.4
SLC38A9-223	ENST00000515629	TOPBP1	Q92547	1522 aa		6.32	□□□□□ -1.4
SLC38A9-223	ENST00000515629	RGL2	O15211	777 aa		6.31	□□□□□ -1.4
SLC38A9-223	ENST00000515629	RNF39	Q9H2S5	420 aa		6.31	□□□□□ -1.4
SLC38A9-223	ENST00000515629	CYB5RL	Q6IPT4	315 aa		6.3	□□□□□ -1.4
SLC38A9-223	ENST00000515629	EIF4G3	O43432	1585 aa	Known RBP	6.29	□□□□□ -1.4
SLC38A9-223	ENST00000515629	RBM25	P49756	843 aa	Known RBP	6.29	□□□□□ -1.4
SLC38A9-223	ENST00000515629	ABCC8	Q09428	1581 aa		6.29	□□□□□ -1.4
SLC38A9-223	ENST00000515629	AQR	O60306	1485 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
SLC38A9-223	ENST00000515629	DNMBP	Q6XZF7	1577 aa		6.28	□□□□□ -1.4
SLC38A9-223	ENST00000515629	CHGA	P10645	457 aa	Known RBP	6.28	□□□□□ -1.4
SLC38A9-223	ENST00000515629	MKRN4P	Q13434	485 aa	Predicted RBP	6.28	□□□□□ -1.4
SLC38A9-223	ENST00000515629	TAF7L	Q5H9L4	462 aa		6.28	□□□□□ -1.4
SLC38A9-223	ENST00000515629	MTMR7	Q9Y216	660 aa		6.28	□□□□□ -1.4
SLC38A9-223	ENST00000515629	SPDYE4	A6NLX3	237 aa		6.27	□□□□□ -1.41
SLC38A9-223	ENST00000515629	APBB1	O00213	710 aa		6.27	□□□□□ -1.41
SLC38A9-223	ENST00000515629	FOXD4L5	Q5VV16	416 aa	Predicted RBP	6.27	□□□□□ -1.41
SLC38A9-223	ENST00000515629	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	6.27	□□□□□ -1.41
SLC38A9-223	ENST00000515629	TARBP1	Q13395	1621 aa	Known RBP	6.26	□□□□□ -1.41
SLC38A9-223	ENST00000515629	LMOD2	Q6P5Q4	547 aa		6.26	□□□□□ -1.41
SLC38A9-223	ENST00000515629	POLA1	P09884	1462 aa	Predicted RBP	6.26	□□□□□ -1.41
SLC38A9-223	ENST00000515629	ARAP1	Q96P48	1450 aa		6.25	□□□□□ -1.41
SLC38A9-223	ENST00000515629	CHD1	O14646	1710 aa		6.25	□□□□□ -1.41
SLC38A9-223	ENST00000515629	RGS22	Q8NE09	1264 aa		6.25	□□□□□ -1.41
SLC38A9-223	ENST00000515629	RAD54L2	Q9Y4B4	1467 aa		6.24	□□□□□ -1.41
SLC38A9-223	ENST00000515629	TDRD9	Q8NDG6	1382 aa	Known RBP	6.24	□□□□□ -1.41
SLC38A9-223	ENST00000515629	SOGA1	O94964	1423 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms