RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 TOP2BQ02880 1626 aa19.14■□□□□ 0.66
CLDND1-231ENST00000515620 DIP2BQ9P265 1576 aa19.14■□□□□ 0.65
CLDND1-231ENST00000515620 MAPKBP1O60336 1514 aa19.13■□□□□ 0.65
CLDND1-231ENST00000515620 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
CLDND1-231ENST00000515620 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
CLDND1-231ENST00000515620 KDM6BO15054 1643 aa19.11■□□□□ 0.65
CLDND1-231ENST00000515620 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLDND1-231ENST00000515620 KDM4FA0A1W2PPD8 638 aa19.09■□□□□ 0.65
CLDND1-231ENST00000515620 ADCY10Q96PN6 1610 aa19.08■□□□□ 0.65
CLDND1-231ENST00000515620 ILDR1Q86SU0 546 aaPredicted RBP19.03■□□□□ 0.64
CLDND1-231ENST00000515620 TSPOAP1O95153 1857 aa19.01■□□□□ 0.63
CLDND1-231ENST00000515620 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
CLDND1-231ENST00000515620 KIAA0586Q9BVV6 1533 aa18.91■□□□□ 0.62
CLDND1-231ENST00000515620 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
CLDND1-231ENST00000515620 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
CLDND1-231ENST00000515620 PTPRGP23470 1445 aa18.83■□□□□ 0.61
CLDND1-231ENST00000515620 PPRC1Q5VV67 1664 aaKnown RBP18.83■□□□□ 0.61
CLDND1-231ENST00000515620 ABCC2Q92887 1545 aa18.82■□□□□ 0.6
CLDND1-231ENST00000515620 CUL7Q14999 1698 aa18.81■□□□□ 0.6
CLDND1-231ENST00000515620 ASXL2Q76L83 1435 aa18.81■□□□□ 0.6
CLDND1-231ENST00000515620 GLI2P10070 1586 aa18.8■□□□□ 0.6
CLDND1-231ENST00000515620 IGF1RP08069 1367 aa18.8■□□□□ 0.6
CLDND1-231ENST00000515620 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
CLDND1-231ENST00000515620 HECW2Q9P2P5 1572 aa18.78■□□□□ 0.6
CLDND1-231ENST00000515620 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.6
CLDND1-231ENST00000515620 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
CLDND1-231ENST00000515620 CARMIL2Q6F5E8 1435 aa18.74■□□□□ 0.59
CLDND1-231ENST00000515620 COL17A1Q9UMD9 1497 aaPredicted RBP18.74■□□□□ 0.59
CLDND1-231ENST00000515620 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
CLDND1-231ENST00000515620 IQGAP2Q13576 1575 aa18.69■□□□□ 0.58
CLDND1-231ENST00000515620 MAP3K4Q9Y6R4 1608 aa18.69■□□□□ 0.58
CLDND1-231ENST00000515620 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
CLDND1-231ENST00000515620 UACAQ9BZF9 1416 aa18.68■□□□□ 0.58
CLDND1-231ENST00000515620 TEX14Q8IWB6 1497 aa18.68■□□□□ 0.58
CLDND1-231ENST00000515620 CARMIL1Q5VZK9 1371 aa18.67■□□□□ 0.58
CLDND1-231ENST00000515620 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.57
CLDND1-231ENST00000515620 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
CLDND1-231ENST00000515620 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
CLDND1-231ENST00000515620 WDR7Q9Y4E6 1490 aa18.55■□□□□ 0.56
CLDND1-231ENST00000515620 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
CLDND1-231ENST00000515620 KIAA0556O60303 1618 aa18.53■□□□□ 0.56
CLDND1-231ENST00000515620 FBXO41Q8TF61 875 aa18.48■□□□□ 0.55
CLDND1-231ENST00000515620 KIF21BO75037 1637 aa18.48■□□□□ 0.55
CLDND1-231ENST00000515620 CD109Q6YHK3 1445 aa18.48■□□□□ 0.55
CLDND1-231ENST00000515620 MAGI3Q5TCQ9 1506 aa18.47■□□□□ 0.55
CLDND1-231ENST00000515620 CFAP43Q8NDM7 1665 aa18.47■□□□□ 0.55
CLDND1-231ENST00000515620 RAPGEF2Q9Y4G8 1499 aa18.45■□□□□ 0.54
CLDND1-231ENST00000515620 KCNH8Q96L42 1107 aa18.42■□□□□ 0.54
CLDND1-231ENST00000515620 ABCA8O94911 1581 aa18.38■□□□□ 0.53
CLDND1-231ENST00000515620 PTPRMP28827 1452 aa18.35■□□□□ 0.53
CLDND1-231ENST00000515620 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
CLDND1-231ENST00000515620 GOLGA3Q08378 1498 aa18.34■□□□□ 0.53
CLDND1-231ENST00000515620 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.53
CLDND1-231ENST00000515620 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
CLDND1-231ENST00000515620 PCF11O94913 1555 aaKnown RBP18.28■□□□□ 0.52
CLDND1-231ENST00000515620 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
CLDND1-231ENST00000515620 LMTK3Q96Q04 1460 aa18.25■□□□□ 0.51
CLDND1-231ENST00000515620 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
CLDND1-231ENST00000515620 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-231ENST00000515620 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
CLDND1-231ENST00000515620 BCORL1Q5H9F3 1711 aa18.23■□□□□ 0.51
CLDND1-231ENST00000515620 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
CLDND1-231ENST00000515620 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
CLDND1-231ENST00000515620 ATP10BO94823 1461 aa18.21■□□□□ 0.51
CLDND1-231ENST00000515620 FRMPD1Q5SYB0 1578 aa18.21■□□□□ 0.51
CLDND1-231ENST00000515620 ARID4BQ4LE39 1312 aaPredicted RBP18.21■□□□□ 0.51
CLDND1-231ENST00000515620 NEO1Q92859 1461 aa18.19■□□□□ 0.5
CLDND1-231ENST00000515620 RIMS1Q86UR5 1692 aaKnown RBP18.16■□□□□ 0.5
CLDND1-231ENST00000515620 ARHGEF40Q8TER5 1519 aa18.15■□□□□ 0.5
CLDND1-231ENST00000515620 P3H3Q8IVL6 736 aa18.15■□□□□ 0.5
CLDND1-231ENST00000515620 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
CLDND1-231ENST00000515620 PRXQ9BXM0 1461 aa18.14■□□□□ 0.49
CLDND1-231ENST00000515620 HSPA2P54652 639 aa18.13■□□□□ 0.49
CLDND1-231ENST00000515620 PHF23Q9BUL5 403 aaPredicted RBP18.12■□□□□ 0.49
CLDND1-231ENST00000515620 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
CLDND1-231ENST00000515620 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
CLDND1-231ENST00000515620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
CLDND1-231ENST00000515620 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
CLDND1-231ENST00000515620 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
CLDND1-231ENST00000515620 CERKQ8TCT0 537 aa18.06■□□□□ 0.48
CLDND1-231ENST00000515620 RICTORQ6R327 1708 aa18.06■□□□□ 0.48
CLDND1-231ENST00000515620 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
CLDND1-231ENST00000515620 FANCAO15360 1455 aa18.05■□□□□ 0.48
CLDND1-231ENST00000515620 POGZQ7Z3K3 1410 aa18.04■□□□□ 0.48
CLDND1-231ENST00000515620 NUP153P49790 1475 aaKnown RBP18.03■□□□□ 0.48
CLDND1-231ENST00000515620 AKNAQ7Z591 1439 aa18.03■□□□□ 0.48
CLDND1-231ENST00000515620 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.48
CLDND1-231ENST00000515620 SIGLEC1Q9BZZ2 1709 aa18.01■□□□□ 0.47
CLDND1-231ENST00000515620 CFAP74Q9C0B2 1584 aa18.01■□□□□ 0.47
CLDND1-231ENST00000515620 ZMYM4Q5VZL5 1548 aa18.01■□□□□ 0.47
CLDND1-231ENST00000515620 ZFYVE16Q7Z3T8 1539 aa18.01■□□□□ 0.47
CLDND1-231ENST00000515620 YEATS2Q9ULM3 1422 aa17.99■□□□□ 0.47
CLDND1-231ENST00000515620 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
CLDND1-231ENST00000515620 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
CLDND1-231ENST00000515620 FER1L4A9Z1Z3 1794 aa17.97■□□□□ 0.47
CLDND1-231ENST00000515620 MLECQ14165 292 aa17.97■□□□□ 0.47
CLDND1-231ENST00000515620 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.47
CLDND1-231ENST00000515620 ILDR2Q71H61 639 aa17.96■□□□□ 0.47
CLDND1-231ENST00000515620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.96■□□□□ 0.47
CLDND1-231ENST00000515620 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms