RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 PRG4Q92954 1404 aaPredicted RBP22.26■■□□□ 1.15
SMAD5-210ENST00000515005 NPM1P06748 294 aaKnown RBP eCLIP22.25■■□□□ 1.15
SMAD5-210ENST00000515005 HECW2Q9P2P5 1572 aa22.22■■□□□ 1.15
SMAD5-210ENST00000515005 ADGRL1O94910 1474 aa22.2■■□□□ 1.14
SMAD5-210ENST00000515005 JPH4Q96JJ6 628 aa22.17■■□□□ 1.14
SMAD5-210ENST00000515005 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
SMAD5-210ENST00000515005 ADCY10Q96PN6 1610 aa22.15■■□□□ 1.14
SMAD5-210ENST00000515005 FBXO41Q8TF61 875 aa22.07■■□□□ 1.12
SMAD5-210ENST00000515005 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
SMAD5-210ENST00000515005 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
SMAD5-210ENST00000515005 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
SMAD5-210ENST00000515005 PPRC1Q5VV67 1664 aaKnown RBP21.97■■□□□ 1.11
SMAD5-210ENST00000515005 COL17A1Q9UMD9 1497 aaPredicted RBP21.93■■□□□ 1.1
SMAD5-210ENST00000515005 GLI2P10070 1586 aa21.85■■□□□ 1.09
SMAD5-210ENST00000515005 BIVM-ERCC5R4GMW8 1640 aa21.83■■□□□ 1.08
SMAD5-210ENST00000515005 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
SMAD5-210ENST00000515005 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
SMAD5-210ENST00000515005 LMTK3Q96Q04 1460 aa21.79■■□□□ 1.08
SMAD5-210ENST00000515005 PLB1Q6P1J6 1458 aa21.78■■□□□ 1.08
SMAD5-210ENST00000515005 ABCC2Q92887 1545 aa21.78■■□□□ 1.08
SMAD5-210ENST00000515005 PTPRGP23470 1445 aa21.78■■□□□ 1.08
SMAD5-210ENST00000515005 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
SMAD5-210ENST00000515005 KIAA0586Q9BVV6 1533 aa21.76■■□□□ 1.07
SMAD5-210ENST00000515005 MAP3K4Q9Y6R4 1608 aa21.72■■□□□ 1.07
SMAD5-210ENST00000515005 CUL7Q14999 1698 aa21.72■■□□□ 1.07
SMAD5-210ENST00000515005 TEX14Q8IWB6 1497 aa21.69■■□□□ 1.06
SMAD5-210ENST00000515005 EPRSP07814 1512 aaKnown RBP21.68■■□□□ 1.06
SMAD5-210ENST00000515005 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
SMAD5-210ENST00000515005 ILDR2Q71H61 639 aa21.62■■□□□ 1.05
SMAD5-210ENST00000515005 UHRF1BP1LA0JNW5 1464 aa21.61■■□□□ 1.05
SMAD5-210ENST00000515005 SOCS7O14512 581 aa21.6■■□□□ 1.05
SMAD5-210ENST00000515005 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
SMAD5-210ENST00000515005 CARMIL2Q6F5E8 1435 aa21.56■■□□□ 1.04
SMAD5-210ENST00000515005 KIF21BO75037 1637 aa21.56■■□□□ 1.04
SMAD5-210ENST00000515005 KDM5BQ9UGL1 1544 aa21.54■■□□□ 1.04
SMAD5-210ENST00000515005 IGF1RP08069 1367 aa21.53■■□□□ 1.04
SMAD5-210ENST00000515005 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
SMAD5-210ENST00000515005 PTPRMP28827 1452 aa21.5■■□□□ 1.03
SMAD5-210ENST00000515005 DISP3Q9P2K9 1392 aa21.49■■□□□ 1.03
SMAD5-210ENST00000515005 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
SMAD5-210ENST00000515005 ADAMTSL3P82987 1691 aa21.44■■□□□ 1.02
SMAD5-210ENST00000515005 MAGI3Q5TCQ9 1506 aa21.43■■□□□ 1.02
SMAD5-210ENST00000515005 CD109Q6YHK3 1445 aa21.42■■□□□ 1.02
SMAD5-210ENST00000515005 WDR7Q9Y4E6 1490 aa21.42■■□□□ 1.02
SMAD5-210ENST00000515005 DISP1Q96F81 1524 aa21.41■■□□□ 1.02
SMAD5-210ENST00000515005 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
SMAD5-210ENST00000515005 CERKQ8TCT0 537 aa21.39■■□□□ 1.01
SMAD5-210ENST00000515005 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
SMAD5-210ENST00000515005 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
SMAD5-210ENST00000515005 KCNH8Q96L42 1107 aa21.35■■□□□ 1.01
SMAD5-210ENST00000515005 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
SMAD5-210ENST00000515005 HSPA2P54652 639 aa21.32■■□□□ 1
SMAD5-210ENST00000515005 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
SMAD5-210ENST00000515005 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
SMAD5-210ENST00000515005 MADDQ8WXG6 1647 aa21.29■■□□□ 1
SMAD5-210ENST00000515005 BCORL1Q5H9F3 1711 aa21.28■■□□□ 1
SMAD5-210ENST00000515005 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
SMAD5-210ENST00000515005 KIAA0556O60303 1618 aa21.24■□□□□ 0.99
SMAD5-210ENST00000515005 SPATA31D1Q6ZQQ2 1576 aa21.22■□□□□ 0.99
SMAD5-210ENST00000515005 ARID4BQ4LE39 1312 aaPredicted RBP21.21■□□□□ 0.99
SMAD5-210ENST00000515005 RIMS1Q86UR5 1692 aaKnown RBP21.2■□□□□ 0.98
SMAD5-210ENST00000515005 RAPGEF3O95398 923 aa21.19■□□□□ 0.98
SMAD5-210ENST00000515005 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
SMAD5-210ENST00000515005 ABCA8O94911 1581 aa21.12■□□□□ 0.97
SMAD5-210ENST00000515005 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
SMAD5-210ENST00000515005 FRMPD1Q5SYB0 1578 aa21.08■□□□□ 0.97
SMAD5-210ENST00000515005 ARID3CA6NKF2 412 aa21.03■□□□□ 0.96
SMAD5-210ENST00000515005 ABCA9Q8IUA7 1624 aa21.03■□□□□ 0.96
SMAD5-210ENST00000515005 RAPGEF2Q9Y4G8 1499 aa21.02■□□□□ 0.96
SMAD5-210ENST00000515005 NEO1Q92859 1461 aa21.01■□□□□ 0.95
SMAD5-210ENST00000515005 ARHGEF40Q8TER5 1519 aa21■□□□□ 0.95
SMAD5-210ENST00000515005 ATP10BO94823 1461 aa20.96■□□□□ 0.95
SMAD5-210ENST00000515005 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
SMAD5-210ENST00000515005 SIGLEC1Q9BZZ2 1709 aa20.95■□□□□ 0.94
SMAD5-210ENST00000515005 STRCQ7RTU9 1775 aa20.95■□□□□ 0.94
SMAD5-210ENST00000515005 YEATS2Q9ULM3 1422 aa20.94■□□□□ 0.94
SMAD5-210ENST00000515005 POGZQ7Z3K3 1410 aa20.93■□□□□ 0.94
SMAD5-210ENST00000515005 FANCAO15360 1455 aa20.92■□□□□ 0.94
SMAD5-210ENST00000515005 MLECQ14165 292 aa20.91■□□□□ 0.94
SMAD5-210ENST00000515005 CTTNBP2Q8WZ74 1663 aa20.91■□□□□ 0.94
SMAD5-210ENST00000515005 DMRT2Q9Y5R5 561 aa20.91■□□□□ 0.94
SMAD5-210ENST00000515005 FER1L4A9Z1Z3 1794 aa20.9■□□□□ 0.94
SMAD5-210ENST00000515005 RICTORQ6R327 1708 aa20.9■□□□□ 0.94
SMAD5-210ENST00000515005 TTC37Q6PGP7 1564 aa20.89■□□□□ 0.94
SMAD5-210ENST00000515005 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.93
SMAD5-210ENST00000515005 DENND4BO75064 1496 aaPredicted RBP20.88■□□□□ 0.93
SMAD5-210ENST00000515005 AKNAQ7Z591 1439 aa20.87■□□□□ 0.93
SMAD5-210ENST00000515005 FHOD3Q2V2M9 1422 aa20.84■□□□□ 0.93
SMAD5-210ENST00000515005 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.93
SMAD5-210ENST00000515005 ZFYVE16Q7Z3T8 1539 aa20.81■□□□□ 0.92
SMAD5-210ENST00000515005 LTBP4Q8N2S1 1624 aa20.8■□□□□ 0.92
SMAD5-210ENST00000515005 ZMYM4Q5VZL5 1548 aa20.79■□□□□ 0.92
SMAD5-210ENST00000515005 P3H3Q8IVL6 736 aa20.78■□□□□ 0.92
SMAD5-210ENST00000515005 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
SMAD5-210ENST00000515005 PTPRTO14522 1441 aa20.78■□□□□ 0.92
SMAD5-210ENST00000515005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.76■□□□□ 0.91
SMAD5-210ENST00000515005 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
SMAD5-210ENST00000515005 ARHGEF12Q9NZN5 1544 aa20.76■□□□□ 0.91
SMAD5-210ENST00000515005 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
SMAD5-210ENST00000515005 IQSEC2Q5JU85 1478 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms