RNA–Protein interactions for RNA: ENST00000514999.5

CPNE4-212, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-212ENST00000514999 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
CPNE4-212ENST00000514999 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPNE4-212ENST00000514999 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
CPNE4-212ENST00000514999 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
CPNE4-212ENST00000514999 MYO15BQ96JP2 1530 aa11.16□□□□□ -0.62
CPNE4-212ENST00000514999 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
CPNE4-212ENST00000514999 PROM2Q8N271 834 aa11.15□□□□□ -0.62
CPNE4-212ENST00000514999 MYT1Q01538 1121 aa11.12□□□□□ -0.63
CPNE4-212ENST00000514999 POTEB2H3BUK9 544 aa11.1□□□□□ -0.63
CPNE4-212ENST00000514999 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
CPNE4-212ENST00000514999 EIF4G1Q04637 1599 aaKnown RBP11.08□□□□□ -0.64
CPNE4-212ENST00000514999 SHROOM4Q9ULL8 1493 aa11.07□□□□□ -0.64
CPNE4-212ENST00000514999 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
CPNE4-212ENST00000514999 MS4A3Q96HJ5 214 aa11.05□□□□□ -0.64
CPNE4-212ENST00000514999 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-212ENST00000514999 ATMINO43313 823 aaPredicted RBP11□□□□□ -0.65
CPNE4-212ENST00000514999 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
CPNE4-212ENST00000514999 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
CPNE4-212ENST00000514999 METRNQ9UJH8 293 aa10.96□□□□□ -0.65
CPNE4-212ENST00000514999 ZCCHC6Q5VYS8 1495 aaKnown RBP10.95□□□□□ -0.66
CPNE4-212ENST00000514999 C7P10643 843 aa10.95□□□□□ -0.66
CPNE4-212ENST00000514999 SLC39A7Q92504 469 aa10.95□□□□□ -0.66
CPNE4-212ENST00000514999 KIF12Q96FN5 646 aa10.93□□□□□ -0.66
CPNE4-212ENST00000514999 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
CPNE4-212ENST00000514999 POTEJP0CG39 1038 aa10.92□□□□□ -0.66
CPNE4-212ENST00000514999 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
CPNE4-212ENST00000514999 MIER1Q8N108 512 aa10.89□□□□□ -0.67
CPNE4-212ENST00000514999 ZEB1P37275 1124 aaPredicted RBP10.88□□□□□ -0.67
CPNE4-212ENST00000514999 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
CPNE4-212ENST00000514999 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
CPNE4-212ENST00000514999 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
CPNE4-212ENST00000514999 PCGF6Q9BYE7 350 aa10.86□□□□□ -0.67
CPNE4-212ENST00000514999 MAP3K13O43283 966 aa10.85□□□□□ -0.67
CPNE4-212ENST00000514999 BMP2KQ9NSY1 1161 aaPredicted RBP10.85□□□□□ -0.67
CPNE4-212ENST00000514999 TRPC6Q9Y210 931 aa10.85□□□□□ -0.67
CPNE4-212ENST00000514999 POTEMA6NI47 508 aa10.84□□□□□ -0.67
CPNE4-212ENST00000514999 MAMSTRQ6ZN01 415 aa10.83□□□□□ -0.68
CPNE4-212ENST00000514999 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
CPNE4-212ENST00000514999 TIE1P35590 1138 aa10.81□□□□□ -0.68
CPNE4-212ENST00000514999 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
CPNE4-212ENST00000514999 SUPT5HO00267 1087 aaKnown RBP10.8□□□□□ -0.68
CPNE4-212ENST00000514999 CUX2O14529 1486 aa10.8□□□□□ -0.68
CPNE4-212ENST00000514999 ERCC6Q03468 1493 aa10.8□□□□□ -0.68
CPNE4-212ENST00000514999 PLCD3Q8N3E9 789 aa10.77□□□□□ -0.69
CPNE4-212ENST00000514999 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
CPNE4-212ENST00000514999 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
CPNE4-212ENST00000514999 NUBP1P53384 320 aa10.74□□□□□ -0.69
CPNE4-212ENST00000514999 SGIP1Q9BQI5 828 aa10.74□□□□□ -0.69
CPNE4-212ENST00000514999 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
CPNE4-212ENST00000514999 TRIM26Q12899 539 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-212ENST00000514999 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-212ENST00000514999 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
CPNE4-212ENST00000514999 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
CPNE4-212ENST00000514999 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
CPNE4-212ENST00000514999 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
CPNE4-212ENST00000514999 TRIM41Q8WV44 630 aa10.68□□□□□ -0.7
CPNE4-212ENST00000514999 FAM163AQ96GL9 167 aaPredicted RBP10.67□□□□□ -0.7
CPNE4-212ENST00000514999 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
CPNE4-212ENST00000514999 SEC24BO95487 1268 aa10.66□□□□□ -0.7
CPNE4-212ENST00000514999 IER5LQ5T953 404 aa10.66□□□□□ -0.7
CPNE4-212ENST00000514999 IFNL1Q8IU54 200 aa10.65□□□□□ -0.7
CPNE4-212ENST00000514999 FKBP8Q14318 412 aa10.63□□□□□ -0.71
CPNE4-212ENST00000514999 FAM212AQ96EL1 285 aa10.62□□□□□ -0.71
CPNE4-212ENST00000514999 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
CPNE4-212ENST00000514999 NESP48681 1621 aa10.59□□□□□ -0.71
CPNE4-212ENST00000514999 TMEM106CQ9BVX2 250 aa10.58□□□□□ -0.72
CPNE4-212ENST00000514999 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
CPNE4-212ENST00000514999 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
CPNE4-212ENST00000514999 SMARCA2P51531 1590 aa10.52□□□□□ -0.73
CPNE4-212ENST00000514999 CENPBP07199 599 aaPredicted RBP10.51□□□□□ -0.73
CPNE4-212ENST00000514999 PLCG2P16885 1265 aa10.51□□□□□ -0.73
CPNE4-212ENST00000514999 DCAF8Q5TAQ9 597 aa10.51□□□□□ -0.73
CPNE4-212ENST00000514999 PYGBP11216 843 aa10.5□□□□□ -0.73
CPNE4-212ENST00000514999 TTBK1Q5TCY1 1321 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-212ENST00000514999 HMGXB3Q12766 1538 aa10.49□□□□□ -0.73
CPNE4-212ENST00000514999 THOC2Q8NI27 1593 aaKnown RBP10.49□□□□□ -0.73
CPNE4-212ENST00000514999 SLAIN1Q8ND83 568 aa10.49□□□□□ -0.73
CPNE4-212ENST00000514999 BAZ1BQ9UIG0 1483 aaKnown RBP10.48□□□□□ -0.73
CPNE4-212ENST00000514999 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
CPNE4-212ENST00000514999 SMARCA4P51532 1647 aa10.47□□□□□ -0.73
CPNE4-212ENST00000514999 ACIN1Q9UKV3 1341 aaKnown RBP10.46□□□□□ -0.73
CPNE4-212ENST00000514999 OCEL1Q9H607 264 aa10.45□□□□□ -0.74
CPNE4-212ENST00000514999 PCDHB8Q9UN66 801 aa10.45□□□□□ -0.74
CPNE4-212ENST00000514999 KIF21AQ7Z4S6 1674 aa10.44□□□□□ -0.74
CPNE4-212ENST00000514999 LAMC3Q9Y6N6 1575 aa10.44□□□□□ -0.74
CPNE4-212ENST00000514999 ST18O60284 1047 aa10.44□□□□□ -0.74
CPNE4-212ENST00000514999 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
CPNE4-212ENST00000514999 PDS5BQ9NTI5 1447 aa10.41□□□□□ -0.74
CPNE4-212ENST00000514999 BAZ1AQ9NRL2 1556 aaPredicted RBP10.38□□□□□ -0.75
CPNE4-212ENST00000514999 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-212ENST00000514999 GSE1Q14687 1217 aa10.37□□□□□ -0.75
CPNE4-212ENST00000514999 KLHL34Q8N239 644 aa10.35□□□□□ -0.75
CPNE4-212ENST00000514999 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
CPNE4-212ENST00000514999 CHRM1P11229 460 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-212ENST00000514999 ZNF467Q7Z7K2 595 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-212ENST00000514999 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.34□□□□□ -0.75
CPNE4-212ENST00000514999 PDCD7Q8N8D1 485 aaKnown RBP10.33□□□□□ -0.76
CPNE4-212ENST00000514999 MRC2Q9UBG0 1479 aa10.33□□□□□ -0.76
CPNE4-212ENST00000514999 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
CPNE4-212ENST00000514999 SNPHO15079 494 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms