RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 TAOK2Q9UL54 1235 aa9.6□□□□□ -0.87
CALCOCO2-224ENST00000514962 CLSPNQ9HAW4 1339 aa9.58□□□□□ -0.88
CALCOCO2-224ENST00000514962 RSF1Q96T23 1441 aaPredicted RBP9.57□□□□□ -0.88
CALCOCO2-224ENST00000514962 RANGAP1P46060 587 aaPredicted RBP9.56□□□□□ -0.88
CALCOCO2-224ENST00000514962 WRNQ14191 1432 aaPredicted RBP eCLIP9.54□□□□□ -0.88
CALCOCO2-224ENST00000514962 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
CALCOCO2-224ENST00000514962 DCAF8L2P0C7V8 631 aa9.53□□□□□ -0.88
CALCOCO2-224ENST00000514962 PIP4P2Q8N4L2 257 aa9.53□□□□□ -0.88
CALCOCO2-224ENST00000514962 PRR29P0C7W0 189 aa9.5□□□□□ -0.89
CALCOCO2-224ENST00000514962 FXR2P51116 673 aaKnown RBP eCLIP9.5□□□□□ -0.89
CALCOCO2-224ENST00000514962 HOMEZQ8IX15 550 aa9.5□□□□□ -0.89
CALCOCO2-224ENST00000514962 STAG3Q9UJ98 1225 aa9.5□□□□□ -0.89
CALCOCO2-224ENST00000514962 ERICH6Q7L0X2 663 aa9.49□□□□□ -0.89
CALCOCO2-224ENST00000514962 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
CALCOCO2-224ENST00000514962 TIMELESSQ9UNS1 1208 aa9.47□□□□□ -0.89
CALCOCO2-224ENST00000514962 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
CALCOCO2-224ENST00000514962 PRKAR2AP13861 404 aaKnown RBP9.44□□□□□ -0.9
CALCOCO2-224ENST00000514962 FAM9AQ8IZU1 332 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO2-224ENST00000514962 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-224ENST00000514962 HAP1P54257 671 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO2-224ENST00000514962 EIF4G1Q04637 1599 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-224ENST00000514962 ANP32EQ9BTT0 268 aa9.4□□□□□ -0.9
CALCOCO2-224ENST00000514962 PROM2Q8N271 834 aa9.39□□□□□ -0.91
CALCOCO2-224ENST00000514962 SCRIBQ14160 1630 aa9.36□□□□□ -0.91
CALCOCO2-224ENST00000514962 MIER1Q8N108 512 aa9.36□□□□□ -0.91
CALCOCO2-224ENST00000514962 YTHDC1Q96MU7 727 aaKnown RBP9.35□□□□□ -0.91
CALCOCO2-224ENST00000514962 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
CALCOCO2-224ENST00000514962 TNIKQ9UKE5 1360 aa9.35□□□□□ -0.91
CALCOCO2-224ENST00000514962 HAX1O00165 279 aa9.34□□□□□ -0.91
CALCOCO2-224ENST00000514962 CHADLQ6NUI6 762 aa9.34□□□□□ -0.91
CALCOCO2-224ENST00000514962 EEA1Q15075 1411 aa9.33□□□□□ -0.92
CALCOCO2-224ENST00000514962 CEP162Q5TB80 1403 aa9.33□□□□□ -0.92
CALCOCO2-224ENST00000514962 BAZ1AQ9NRL2 1556 aaPredicted RBP9.33□□□□□ -0.92
CALCOCO2-224ENST00000514962 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
CALCOCO2-224ENST00000514962 SUPT16HQ9Y5B9 1047 aaKnown RBP9.31□□□□□ -0.92
CALCOCO2-224ENST00000514962 TSHZ2Q9NRE2 1034 aa9.29□□□□□ -0.92
CALCOCO2-224ENST00000514962 PLEKHG5O94827 1062 aa9.27□□□□□ -0.93
CALCOCO2-224ENST00000514962 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.93
CALCOCO2-224ENST00000514962 MROH2BQ7Z745 1585 aa9.26□□□□□ -0.93
CALCOCO2-224ENST00000514962 FARP1Q9Y4F1 1045 aaPredicted RBP9.25□□□□□ -0.93
CALCOCO2-224ENST00000514962 WIZO95785 1651 aa9.25□□□□□ -0.93
CALCOCO2-224ENST00000514962 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
CALCOCO2-224ENST00000514962 GOLGA3Q08378 1498 aa9.22□□□□□ -0.93
CALCOCO2-224ENST00000514962 SP7Q8TDD2 431 aaPredicted RBP9.22□□□□□ -0.93
CALCOCO2-224ENST00000514962 NPM1P06748 294 aaKnown RBP eCLIP9.21□□□□□ -0.94
CALCOCO2-224ENST00000514962 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-224ENST00000514962 DNAJC5Q9H3Z4 198 aa9.21□□□□□ -0.94
CALCOCO2-224ENST00000514962 CECR2Q9BXF3 1484 aa9.21□□□□□ -0.94
CALCOCO2-224ENST00000514962 C19orf67A6NJJ6 358 aa9.2□□□□□ -0.94
CALCOCO2-224ENST00000514962 TOP2AP11388 1531 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-224ENST00000514962 NACADO15069 1562 aa9.2□□□□□ -0.94
CALCOCO2-224ENST00000514962 KIF21BO75037 1637 aa9.18□□□□□ -0.94
CALCOCO2-224ENST00000514962 CCDC88BA6NC98 1476 aa9.17□□□□□ -0.94
CALCOCO2-224ENST00000514962 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
CALCOCO2-224ENST00000514962 ABCC8Q09428 1581 aa9.16□□□□□ -0.94
CALCOCO2-224ENST00000514962 PAK3O75914 559 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-224ENST00000514962 PLCD3Q8N3E9 789 aa9.16□□□□□ -0.94
CALCOCO2-224ENST00000514962 PODXL2Q9NZ53 605 aa9.13□□□□□ -0.95
CALCOCO2-224ENST00000514962 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
CALCOCO2-224ENST00000514962 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
CALCOCO2-224ENST00000514962 BAZ1BQ9UIG0 1483 aaKnown RBP9.13□□□□□ -0.95
CALCOCO2-224ENST00000514962 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
CALCOCO2-224ENST00000514962 VPS8Q8N3P4 1428 aa9.13□□□□□ -0.95
CALCOCO2-224ENST00000514962 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
CALCOCO2-224ENST00000514962 SOGA1O94964 1423 aa9.12□□□□□ -0.95
CALCOCO2-224ENST00000514962 IFNLR1Q8IU57 520 aaPredicted RBP9.11□□□□□ -0.95
CALCOCO2-224ENST00000514962 DHX57Q6P158 1386 aaKnown RBP9.1□□□□□ -0.95
CALCOCO2-224ENST00000514962 EVX2Q03828 476 aa9.09□□□□□ -0.95
CALCOCO2-224ENST00000514962 CLIP1P30622 1438 aa9.08□□□□□ -0.96
CALCOCO2-224ENST00000514962 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-224ENST00000514962 C14orf37Q86TY3 774 aa9.08□□□□□ -0.96
CALCOCO2-224ENST00000514962 CUX2O14529 1486 aa9.08□□□□□ -0.96
CALCOCO2-224ENST00000514962 ZRANB1Q9UGI0 708 aa9.07□□□□□ -0.96
CALCOCO2-224ENST00000514962 MNX1P50219 401 aaPredicted RBP9.06□□□□□ -0.96
CALCOCO2-224ENST00000514962 CLCN6P51797 869 aa9.06□□□□□ -0.96
CALCOCO2-224ENST00000514962 TMEM132AQ24JP5 1023 aa9.05□□□□□ -0.96
CALCOCO2-224ENST00000514962 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
CALCOCO2-224ENST00000514962 SMARCA4P51532 1647 aa9.05□□□□□ -0.96
CALCOCO2-224ENST00000514962 NEFLP07196 543 aa9.04□□□□□ -0.96
CALCOCO2-224ENST00000514962 RUSC2Q8N2Y8 1516 aa9.04□□□□□ -0.96
CALCOCO2-224ENST00000514962 FANCIQ9NVI1 1328 aa9.04□□□□□ -0.96
CALCOCO2-224ENST00000514962 KLHL34Q8N239 644 aa9.03□□□□□ -0.96
CALCOCO2-224ENST00000514962 ZNF579Q8NAF0 562 aaKnown RBP9.02□□□□□ -0.97
CALCOCO2-224ENST00000514962 RRBP1Q9P2E9 1410 aaKnown RBP9□□□□□ -0.97
CALCOCO2-224ENST00000514962 GABBR2O75899 941 aa9□□□□□ -0.97
CALCOCO2-224ENST00000514962 CCER2I3L3R5 266 aa8.98□□□□□ -0.97
CALCOCO2-224ENST00000514962 NPM2Q86SE8 214 aaKnown RBP8.97□□□□□ -0.97
CALCOCO2-224ENST00000514962 TSPYL2Q9H2G4 693 aaPredicted RBP8.97□□□□□ -0.97
CALCOCO2-224ENST00000514962 ERICH3Q5RHP9 1530 aa8.96□□□□□ -0.97
CALCOCO2-224ENST00000514962 ERICH6BQ5W0A0 696 aa8.95□□□□□ -0.98
CALCOCO2-224ENST00000514962 SPOCK2Q92563 424 aa8.95□□□□□ -0.98
CALCOCO2-224ENST00000514962 FAM212AQ96EL1 285 aa8.94□□□□□ -0.98
CALCOCO2-224ENST00000514962 SYNJ1O43426 1573 aa8.94□□□□□ -0.98
CALCOCO2-224ENST00000514962 PHF12Q96QT6 1004 aa8.93□□□□□ -0.98
CALCOCO2-224ENST00000514962 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
CALCOCO2-224ENST00000514962 CDK11AQ9UQ88 783 aaPredicted RBP8.91□□□□□ -0.98
CALCOCO2-224ENST00000514962 PEG3Q9GZU2 1588 aa8.9□□□□□ -0.98
CALCOCO2-224ENST00000514962 MAPKBP1O60336 1514 aa8.9□□□□□ -0.98
CALCOCO2-224ENST00000514962 ARAP1Q96P48 1450 aa8.9□□□□□ -0.98
CALCOCO2-224ENST00000514962 RAPGEF2Q9Y4G8 1499 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms