RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 ABCC10Q5T3U5 1492 aa23.58■■□□□ 1.37
SMAD5-209ENST00000514777 FAM69CQ0P6D2 419 aa23.58■■□□□ 1.37
SMAD5-209ENST00000514777 RUSC2Q8N2Y8 1516 aa23.56■■□□□ 1.36
SMAD5-209ENST00000514777 MAPKBP1O60336 1514 aa23.52■■□□□ 1.36
SMAD5-209ENST00000514777 ADCY10Q96PN6 1610 aa23.51■■□□□ 1.35
SMAD5-209ENST00000514777 DIP2BQ9P265 1576 aa23.51■■□□□ 1.35
SMAD5-209ENST00000514777 NPM1P06748 294 aaKnown RBP eCLIP23.5■■□□□ 1.35
SMAD5-209ENST00000514777 KDM4FA0A1W2PPD8 638 aa23.44■■□□□ 1.34
SMAD5-209ENST00000514777 TSPOAP1O95153 1857 aa23.43■■□□□ 1.34
SMAD5-209ENST00000514777 KIAA0586Q9BVV6 1533 aa23.41■■□□□ 1.34
SMAD5-209ENST00000514777 IGF1RP08069 1367 aa23.4■■□□□ 1.34
SMAD5-209ENST00000514777 KDM6BO15054 1643 aa23.38■■□□□ 1.33
SMAD5-209ENST00000514777 CUL7Q14999 1698 aa23.29■■□□□ 1.32
SMAD5-209ENST00000514777 PTPRGP23470 1445 aa23.27■■□□□ 1.32
SMAD5-209ENST00000514777 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
SMAD5-209ENST00000514777 PPRC1Q5VV67 1664 aaKnown RBP23.22■■□□□ 1.31
SMAD5-209ENST00000514777 TTBK1Q5TCY1 1321 aaPredicted RBP23.22■■□□□ 1.31
SMAD5-209ENST00000514777 ABCC2Q92887 1545 aa23.19■■□□□ 1.3
SMAD5-209ENST00000514777 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
SMAD5-209ENST00000514777 TNIKQ9UKE5 1360 aa23.19■■□□□ 1.3
SMAD5-209ENST00000514777 ASXL2Q76L83 1435 aa23.17■■□□□ 1.3
SMAD5-209ENST00000514777 GLI2P10070 1586 aa23.17■■□□□ 1.3
SMAD5-209ENST00000514777 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
SMAD5-209ENST00000514777 PLB1Q6P1J6 1458 aa23.14■■□□□ 1.29
SMAD5-209ENST00000514777 UHRF1BP1LA0JNW5 1464 aa23.12■■□□□ 1.29
SMAD5-209ENST00000514777 COL17A1Q9UMD9 1497 aaPredicted RBP23.11■■□□□ 1.29
SMAD5-209ENST00000514777 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
SMAD5-209ENST00000514777 ILDR1Q86SU0 546 aaPredicted RBP23.11■■□□□ 1.29
SMAD5-209ENST00000514777 UACAQ9BZF9 1416 aa23.08■■□□□ 1.29
SMAD5-209ENST00000514777 DISP1Q96F81 1524 aa23.08■■□□□ 1.29
SMAD5-209ENST00000514777 ADGRL1O94910 1474 aa23.06■■□□□ 1.28
SMAD5-209ENST00000514777 EPRSP07814 1512 aaKnown RBP23.04■■□□□ 1.28
SMAD5-209ENST00000514777 MAP3K4Q9Y6R4 1608 aa23.04■■□□□ 1.28
SMAD5-209ENST00000514777 KDM5BQ9UGL1 1544 aa23.03■■□□□ 1.28
SMAD5-209ENST00000514777 ZCCHC11Q5TAX3 1644 aaKnown RBP22.99■■□□□ 1.27
SMAD5-209ENST00000514777 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
SMAD5-209ENST00000514777 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
SMAD5-209ENST00000514777 KIAA0556O60303 1618 aa22.92■■□□□ 1.26
SMAD5-209ENST00000514777 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
SMAD5-209ENST00000514777 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.26
SMAD5-209ENST00000514777 WDR7Q9Y4E6 1490 aa22.85■■□□□ 1.25
SMAD5-209ENST00000514777 MAGI3Q5TCQ9 1506 aa22.79■■□□□ 1.24
SMAD5-209ENST00000514777 CFAP43Q8NDM7 1665 aa22.78■■□□□ 1.24
SMAD5-209ENST00000514777 CD109Q6YHK3 1445 aa22.78■■□□□ 1.24
SMAD5-209ENST00000514777 KCNH8Q96L42 1107 aa22.77■■□□□ 1.24
SMAD5-209ENST00000514777 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.24
SMAD5-209ENST00000514777 ABCA8O94911 1581 aa22.76■■□□□ 1.23
SMAD5-209ENST00000514777 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
SMAD5-209ENST00000514777 KIF21BO75037 1637 aa22.68■■□□□ 1.22
SMAD5-209ENST00000514777 ARAP3Q8WWN8 1544 aa22.63■■□□□ 1.21
SMAD5-209ENST00000514777 PRXQ9BXM0 1461 aa22.6■■□□□ 1.21
SMAD5-209ENST00000514777 ATP10BO94823 1461 aa22.59■■□□□ 1.21
SMAD5-209ENST00000514777 ARID3CA6NKF2 412 aa22.57■■□□□ 1.2
SMAD5-209ENST00000514777 ADAMTSL3P82987 1691 aa22.55■■□□□ 1.2
SMAD5-209ENST00000514777 P3H3Q8IVL6 736 aa22.54■■□□□ 1.2
SMAD5-209ENST00000514777 ABCA9Q8IUA7 1624 aa22.53■■□□□ 1.2
SMAD5-209ENST00000514777 PTPRMP28827 1452 aa22.52■■□□□ 1.2
SMAD5-209ENST00000514777 RAPGEF3O95398 923 aa22.5■■□□□ 1.19
SMAD5-209ENST00000514777 FBXO41Q8TF61 875 aa22.5■■□□□ 1.19
SMAD5-209ENST00000514777 PHLDB1Q86UU1 1377 aa22.5■■□□□ 1.19
SMAD5-209ENST00000514777 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.18
SMAD5-209ENST00000514777 FRMPD1Q5SYB0 1578 aa22.44■■□□□ 1.18
SMAD5-209ENST00000514777 NEO1Q92859 1461 aa22.43■■□□□ 1.18
SMAD5-209ENST00000514777 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
SMAD5-209ENST00000514777 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
SMAD5-209ENST00000514777 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
SMAD5-209ENST00000514777 MADDQ8WXG6 1647 aa22.4■■□□□ 1.18
SMAD5-209ENST00000514777 LMTK3Q96Q04 1460 aa22.35■■□□□ 1.17
SMAD5-209ENST00000514777 PCF11O94913 1555 aaKnown RBP22.35■■□□□ 1.17
SMAD5-209ENST00000514777 NUP153P49790 1475 aaKnown RBP22.34■■□□□ 1.17
SMAD5-209ENST00000514777 ARID4BQ4LE39 1312 aaPredicted RBP22.34■■□□□ 1.17
SMAD5-209ENST00000514777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.34■■□□□ 1.17
SMAD5-209ENST00000514777 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
SMAD5-209ENST00000514777 RICTORQ6R327 1708 aa22.33■■□□□ 1.17
SMAD5-209ENST00000514777 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
SMAD5-209ENST00000514777 RIMS1Q86UR5 1692 aaKnown RBP22.31■■□□□ 1.16
SMAD5-209ENST00000514777 ARHGEF40Q8TER5 1519 aa22.28■■□□□ 1.16
SMAD5-209ENST00000514777 AKNAQ7Z591 1439 aa22.27■■□□□ 1.16
SMAD5-209ENST00000514777 SIGLEC1Q9BZZ2 1709 aa22.27■■□□□ 1.16
SMAD5-209ENST00000514777 DENND4BO75064 1496 aaPredicted RBP22.27■■□□□ 1.16
SMAD5-209ENST00000514777 FHOD3Q2V2M9 1422 aa22.26■■□□□ 1.15
SMAD5-209ENST00000514777 PLEKHD1A6NEE1 506 aa22.25■■□□□ 1.15
SMAD5-209ENST00000514777 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
SMAD5-209ENST00000514777 HSPA2P54652 639 aa22.24■■□□□ 1.15
SMAD5-209ENST00000514777 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMAD5-209ENST00000514777 FANCAO15360 1455 aa22.22■■□□□ 1.15
SMAD5-209ENST00000514777 YEATS2Q9ULM3 1422 aa22.19■■□□□ 1.14
SMAD5-209ENST00000514777 ZMYM4Q5VZL5 1548 aa22.19■■□□□ 1.14
SMAD5-209ENST00000514777 TTC37Q6PGP7 1564 aa22.19■■□□□ 1.14
SMAD5-209ENST00000514777 CFAP74Q9C0B2 1584 aa22.18■■□□□ 1.14
SMAD5-209ENST00000514777 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
SMAD5-209ENST00000514777 ZFYVE16Q7Z3T8 1539 aa22.15■■□□□ 1.14
SMAD5-209ENST00000514777 POGZQ7Z3K3 1410 aa22.14■■□□□ 1.13
SMAD5-209ENST00000514777 HECW1Q76N89 1606 aa22.13■■□□□ 1.13
SMAD5-209ENST00000514777 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
SMAD5-209ENST00000514777 MAGI2Q86UL8 1455 aa22.12■■□□□ 1.13
SMAD5-209ENST00000514777 MLECQ14165 292 aa22.11■■□□□ 1.13
SMAD5-209ENST00000514777 CERKQ8TCT0 537 aa22.11■■□□□ 1.13
SMAD5-209ENST00000514777 FER1L4A9Z1Z3 1794 aa22.11■■□□□ 1.13
SMAD5-209ENST00000514777 CDK13Q14004 1512 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms