RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
NEDD9-215ENST00000514660 MAPKBP1O60336 1514 aa19.67■□□□□ 0.74
NEDD9-215ENST00000514660 TSPOAP1O95153 1857 aa19.66■□□□□ 0.74
NEDD9-215ENST00000514660 ADCY10Q96PN6 1610 aa19.65■□□□□ 0.74
NEDD9-215ENST00000514660 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
NEDD9-215ENST00000514660 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
NEDD9-215ENST00000514660 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
NEDD9-215ENST00000514660 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
NEDD9-215ENST00000514660 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
NEDD9-215ENST00000514660 NPM1P06748 294 aaKnown RBP eCLIP19.52■□□□□ 0.72
NEDD9-215ENST00000514660 ADGRL1O94910 1474 aa19.52■□□□□ 0.72
NEDD9-215ENST00000514660 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
NEDD9-215ENST00000514660 PPRC1Q5VV67 1664 aaKnown RBP19.5■□□□□ 0.71
NEDD9-215ENST00000514660 HECW2Q9P2P5 1572 aa19.49■□□□□ 0.71
NEDD9-215ENST00000514660 COL17A1Q9UMD9 1497 aaPredicted RBP19.46■□□□□ 0.71
NEDD9-215ENST00000514660 KIAA0586Q9BVV6 1533 aa19.35■□□□□ 0.69
NEDD9-215ENST00000514660 GLI2P10070 1586 aa19.33■□□□□ 0.69
NEDD9-215ENST00000514660 ASXL2Q76L83 1435 aa19.33■□□□□ 0.68
NEDD9-215ENST00000514660 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
NEDD9-215ENST00000514660 PTPRGP23470 1445 aa19.29■□□□□ 0.68
NEDD9-215ENST00000514660 TTBK1Q5TCY1 1321 aaPredicted RBP19.28■□□□□ 0.68
NEDD9-215ENST00000514660 CUL7Q14999 1698 aa19.27■□□□□ 0.68
NEDD9-215ENST00000514660 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
NEDD9-215ENST00000514660 PLB1Q6P1J6 1458 aa19.24■□□□□ 0.67
NEDD9-215ENST00000514660 IGF1RP08069 1367 aa19.24■□□□□ 0.67
NEDD9-215ENST00000514660 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
NEDD9-215ENST00000514660 EPRSP07814 1512 aaKnown RBP19.21■□□□□ 0.67
NEDD9-215ENST00000514660 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
NEDD9-215ENST00000514660 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
NEDD9-215ENST00000514660 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
NEDD9-215ENST00000514660 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
NEDD9-215ENST00000514660 KDM5BQ9UGL1 1544 aa19.13■□□□□ 0.65
NEDD9-215ENST00000514660 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
NEDD9-215ENST00000514660 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
NEDD9-215ENST00000514660 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
NEDD9-215ENST00000514660 CARMIL2Q6F5E8 1435 aa19.08■□□□□ 0.64
NEDD9-215ENST00000514660 KIF21BO75037 1637 aa19.07■□□□□ 0.64
NEDD9-215ENST00000514660 IQGAP2Q13576 1575 aa19.06■□□□□ 0.64
NEDD9-215ENST00000514660 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
NEDD9-215ENST00000514660 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
NEDD9-215ENST00000514660 WDR7Q9Y4E6 1490 aa18.99■□□□□ 0.63
NEDD9-215ENST00000514660 MAGI3Q5TCQ9 1506 aa18.97■□□□□ 0.63
NEDD9-215ENST00000514660 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
NEDD9-215ENST00000514660 PTPRMP28827 1452 aa18.95■□□□□ 0.62
NEDD9-215ENST00000514660 CD109Q6YHK3 1445 aa18.94■□□□□ 0.62
NEDD9-215ENST00000514660 UGGT2Q9NYU1 1516 aa18.94■□□□□ 0.62
NEDD9-215ENST00000514660 KIAA0556O60303 1618 aa18.93■□□□□ 0.62
NEDD9-215ENST00000514660 CFAP43Q8NDM7 1665 aa18.92■□□□□ 0.62
NEDD9-215ENST00000514660 LMTK3Q96Q04 1460 aa18.9■□□□□ 0.62
NEDD9-215ENST00000514660 ILDR2Q71H61 639 aa18.88■□□□□ 0.61
NEDD9-215ENST00000514660 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
NEDD9-215ENST00000514660 PCF11O94913 1555 aaKnown RBP18.85■□□□□ 0.61
NEDD9-215ENST00000514660 ARAP3Q8WWN8 1544 aa18.85■□□□□ 0.61
NEDD9-215ENST00000514660 ABCA8O94911 1581 aa18.83■□□□□ 0.6
NEDD9-215ENST00000514660 MADDQ8WXG6 1647 aa18.82■□□□□ 0.6
NEDD9-215ENST00000514660 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
NEDD9-215ENST00000514660 HSPA2P54652 639 aa18.78■□□□□ 0.6
NEDD9-215ENST00000514660 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
NEDD9-215ENST00000514660 RAPGEF2Q9Y4G8 1499 aa18.76■□□□□ 0.59
NEDD9-215ENST00000514660 FRMPD1Q5SYB0 1578 aa18.76■□□□□ 0.59
NEDD9-215ENST00000514660 SOCS7O14512 581 aa18.73■□□□□ 0.59
NEDD9-215ENST00000514660 CERKQ8TCT0 537 aa18.72■□□□□ 0.59
NEDD9-215ENST00000514660 RIMS1Q86UR5 1692 aaKnown RBP18.72■□□□□ 0.59
NEDD9-215ENST00000514660 ARID3CA6NKF2 412 aa18.7■□□□□ 0.58
NEDD9-215ENST00000514660 ABCA9Q8IUA7 1624 aa18.69■□□□□ 0.58
NEDD9-215ENST00000514660 ATP10BO94823 1461 aa18.68■□□□□ 0.58
NEDD9-215ENST00000514660 CTTNBP2Q8WZ74 1663 aa18.68■□□□□ 0.58
NEDD9-215ENST00000514660 SIGLEC1Q9BZZ2 1709 aa18.68■□□□□ 0.58
NEDD9-215ENST00000514660 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
NEDD9-215ENST00000514660 ARID4BQ4LE39 1312 aaPredicted RBP18.64■□□□□ 0.57
NEDD9-215ENST00000514660 PLPPR3Q6T4P5 718 aa18.62■□□□□ 0.57
NEDD9-215ENST00000514660 PHLDB1Q86UU1 1377 aa18.61■□□□□ 0.57
NEDD9-215ENST00000514660 GOLGA3Q08378 1498 aa18.6■□□□□ 0.57
NEDD9-215ENST00000514660 NEO1Q92859 1461 aa18.6■□□□□ 0.57
NEDD9-215ENST00000514660 ARHGEF40Q8TER5 1519 aa18.59■□□□□ 0.57
NEDD9-215ENST00000514660 RICTORQ6R327 1708 aa18.57■□□□□ 0.56
NEDD9-215ENST00000514660 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
NEDD9-215ENST00000514660 SPATA31D1Q6ZQQ2 1576 aa18.52■□□□□ 0.56
NEDD9-215ENST00000514660 YEATS2Q9ULM3 1422 aa18.52■□□□□ 0.56
NEDD9-215ENST00000514660 STRCQ7RTU9 1775 aa18.52■□□□□ 0.55
NEDD9-215ENST00000514660 FHOD3Q2V2M9 1422 aa18.49■□□□□ 0.55
NEDD9-215ENST00000514660 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
NEDD9-215ENST00000514660 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
NEDD9-215ENST00000514660 FER1L4A9Z1Z3 1794 aa18.47■□□□□ 0.55
NEDD9-215ENST00000514660 PRXQ9BXM0 1461 aa18.46■□□□□ 0.55
NEDD9-215ENST00000514660 MLECQ14165 292 aa18.46■□□□□ 0.55
NEDD9-215ENST00000514660 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
NEDD9-215ENST00000514660 AKNAQ7Z591 1439 aa18.45■□□□□ 0.54
NEDD9-215ENST00000514660 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
NEDD9-215ENST00000514660 FANCAO15360 1455 aa18.44■□□□□ 0.54
NEDD9-215ENST00000514660 CEBPAP49715 358 aaPredicted RBP18.43■□□□□ 0.54
NEDD9-215ENST00000514660 NUP153P49790 1475 aaKnown RBP18.43■□□□□ 0.54
NEDD9-215ENST00000514660 ZFYVE16Q7Z3T8 1539 aa18.42■□□□□ 0.54
NEDD9-215ENST00000514660 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
NEDD9-215ENST00000514660 ARHGEF12Q9NZN5 1544 aa18.4■□□□□ 0.54
NEDD9-215ENST00000514660 SAMD9Q5K651 1589 aa18.4■□□□□ 0.54
NEDD9-215ENST00000514660 HECW1Q76N89 1606 aa18.4■□□□□ 0.54
NEDD9-215ENST00000514660 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
NEDD9-215ENST00000514660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.53
NEDD9-215ENST00000514660 EFCAB5A4FU69 1503 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms