RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 EEA1Q15075 1411 aa10.2□□□□□ -0.78
CCDC30-214ENST00000514642 MLECQ14165 292 aa10.19□□□□□ -0.78
CCDC30-214ENST00000514642 BCL11AQ9H165 835 aa10.19□□□□□ -0.78
CCDC30-214ENST00000514642 SENP3Q9H4L4 574 aaPredicted RBP10.18□□□□□ -0.78
CCDC30-214ENST00000514642 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
CCDC30-214ENST00000514642 CEP164Q9UPV0 1460 aa10.17□□□□□ -0.78
CCDC30-214ENST00000514642 GOLGA3Q08378 1498 aa10.16□□□□□ -0.78
CCDC30-214ENST00000514642 HRCP23327 699 aa10.16□□□□□ -0.78
CCDC30-214ENST00000514642 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
CCDC30-214ENST00000514642 CUX2O14529 1486 aa10.14□□□□□ -0.79
CCDC30-214ENST00000514642 SOGA1O94964 1423 aa10.13□□□□□ -0.79
CCDC30-214ENST00000514642 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
CCDC30-214ENST00000514642 CCNB3Q8WWL7 1395 aa10.12□□□□□ -0.79
CCDC30-214ENST00000514642 POGKQ9P215 609 aa10.12□□□□□ -0.79
CCDC30-214ENST00000514642 NPHP1O15259 732 aa10.1□□□□□ -0.79
CCDC30-214ENST00000514642 RRP7BPQ9NSQ0 103 aa10.1□□□□□ -0.79
CCDC30-214ENST00000514642 CARMIL1Q5VZK9 1371 aa10.09□□□□□ -0.79
CCDC30-214ENST00000514642 WDR43Q15061 677 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC30-214ENST00000514642 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
CCDC30-214ENST00000514642 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
CCDC30-214ENST00000514642 DIEXFQ68CQ4 756 aaKnown RBP10.07□□□□□ -0.8
CCDC30-214ENST00000514642 ARXQ96QS3 562 aa10.06□□□□□ -0.8
CCDC30-214ENST00000514642 CADPSQ9ULU8 1353 aa10.05□□□□□ -0.8
CCDC30-214ENST00000514642 FHAD1B1AJZ9 1412 aa10.05□□□□□ -0.8
CCDC30-214ENST00000514642 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
CCDC30-214ENST00000514642 MYO15BQ96JP2 1530 aa10.04□□□□□ -0.8
CCDC30-214ENST00000514642 RGL3Q3MIN7 710 aa10.03□□□□□ -0.8
CCDC30-214ENST00000514642 CYB5RLQ6IPT4 315 aa10.03□□□□□ -0.8
CCDC30-214ENST00000514642 CFAP53Q96M91 514 aa10.03□□□□□ -0.8
CCDC30-214ENST00000514642 EID1Q9Y6B2 187 aa10.03□□□□□ -0.8
CCDC30-214ENST00000514642 EFCAB2Q5VUJ9 269 aa10.02□□□□□ -0.81
CCDC30-214ENST00000514642 GGT6Q6P531 493 aa10.01□□□□□ -0.81
CCDC30-214ENST00000514642 TDRD9Q8NDG6 1382 aaKnown RBP10□□□□□ -0.81
CCDC30-214ENST00000514642 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
CCDC30-214ENST00000514642 CCDC9Q9Y3X0 531 aaKnown RBP9.99□□□□□ -0.81
CCDC30-214ENST00000514642 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.98□□□□□ -0.81
CCDC30-214ENST00000514642 TOP2AP11388 1531 aaKnown RBP9.98□□□□□ -0.81
CCDC30-214ENST00000514642 CCDC88BA6NC98 1476 aa9.97□□□□□ -0.81
CCDC30-214ENST00000514642 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC30-214ENST00000514642 FANCD2Q9BXW9 1451 aa9.97□□□□□ -0.81
CCDC30-214ENST00000514642 PPM1GO15355 546 aaPredicted RBP9.96□□□□□ -0.81
CCDC30-214ENST00000514642 MEX3CQ5U5Q3 659 aaKnown RBP9.95□□□□□ -0.82
CCDC30-214ENST00000514642 ATAD2BQ9ULI0 1458 aa9.94□□□□□ -0.82
CCDC30-214ENST00000514642 MROH2BQ7Z745 1585 aa9.94□□□□□ -0.82
CCDC30-214ENST00000514642 RTL5Q5HYW3 569 aaPredicted RBP9.94□□□□□ -0.82
CCDC30-214ENST00000514642 CEP162Q5TB80 1403 aa9.94□□□□□ -0.82
CCDC30-214ENST00000514642 NUDCQ9Y266 331 aa9.93□□□□□ -0.82
CCDC30-214ENST00000514642 KNSTRNQ9Y448 316 aa9.93□□□□□ -0.82
CCDC30-214ENST00000514642 PNNQ9H307 717 aaKnown RBP9.93□□□□□ -0.82
CCDC30-214ENST00000514642 TMX4Q9H1E5 349 aaPredicted RBP9.92□□□□□ -0.82
CCDC30-214ENST00000514642 SMARCA4P51532 1647 aa9.92□□□□□ -0.82
CCDC30-214ENST00000514642 CSB-PGBD3P0DP91 1061 aa9.92□□□□□ -0.82
CCDC30-214ENST00000514642 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
CCDC30-214ENST00000514642 TNIKQ9UKE5 1360 aa9.91□□□□□ -0.82
CCDC30-214ENST00000514642 FMN1Q68DA7 1419 aa9.91□□□□□ -0.82
CCDC30-214ENST00000514642 MAPK8IP3Q9UPT6 1336 aa9.9□□□□□ -0.82
CCDC30-214ENST00000514642 PAK3O75914 559 aaPredicted RBP9.9□□□□□ -0.82
CCDC30-214ENST00000514642 SRPK2P78362 688 aaKnown RBP9.9□□□□□ -0.82
CCDC30-214ENST00000514642 FAM69CQ0P6D2 419 aa9.9□□□□□ -0.82
CCDC30-214ENST00000514642 CARD11Q9BXL7 1154 aa9.9□□□□□ -0.82
CCDC30-214ENST00000514642 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
CCDC30-214ENST00000514642 SPAG9O60271 1321 aaKnown RBP9.89□□□□□ -0.83
CCDC30-214ENST00000514642 UPF2Q9HAU5 1272 aaKnown RBP9.88□□□□□ -0.83
CCDC30-214ENST00000514642 PTPRGP23470 1445 aa9.88□□□□□ -0.83
CCDC30-214ENST00000514642 FAM9BQ8IZU0 186 aa9.88□□□□□ -0.83
CCDC30-214ENST00000514642 WASHC2CQ9Y4E1 1318 aa9.88□□□□□ -0.83
CCDC30-214ENST00000514642 HDGFL2Q7Z4V5 671 aaPredicted RBP9.88□□□□□ -0.83
CCDC30-214ENST00000514642 ARHGAP35Q9NRY4 1499 aa9.88□□□□□ -0.83
CCDC30-214ENST00000514642 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
CCDC30-214ENST00000514642 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
CCDC30-214ENST00000514642 HSP90AA1P07900 732 aaKnown RBP9.86□□□□□ -0.83
CCDC30-214ENST00000514642 WIZO95785 1651 aa9.86□□□□□ -0.83
CCDC30-214ENST00000514642 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
CCDC30-214ENST00000514642 RAPGEF2Q9Y4G8 1499 aa9.86□□□□□ -0.83
CCDC30-214ENST00000514642 FOXD1Q16676 465 aa9.86□□□□□ -0.83
CCDC30-214ENST00000514642 STK26Q9P289 416 aa9.86□□□□□ -0.83
CCDC30-214ENST00000514642 KIF3BO15066 747 aa9.85□□□□□ -0.83
CCDC30-214ENST00000514642 ANKRD30AQ9BXX3 1397 aa9.85□□□□□ -0.83
CCDC30-214ENST00000514642 CCDC18Q5T9S5 1454 aa9.85□□□□□ -0.83
CCDC30-214ENST00000514642 PHF23Q9BUL5 403 aaPredicted RBP9.84□□□□□ -0.83
CCDC30-214ENST00000514642 TMF1P82094 1093 aa9.83□□□□□ -0.84
CCDC30-214ENST00000514642 SOX12O15370 315 aa9.83□□□□□ -0.84
CCDC30-214ENST00000514642 MRC2Q9UBG0 1479 aa9.83□□□□□ -0.84
CCDC30-214ENST00000514642 CDK11BP21127 795 aaKnown RBP9.82□□□□□ -0.84
CCDC30-214ENST00000514642 LAS1LQ9Y4W2 734 aaKnown RBP9.82□□□□□ -0.84
CCDC30-214ENST00000514642 DDX10Q13206 875 aaKnown RBP9.82□□□□□ -0.84
CCDC30-214ENST00000514642 SAFB2Q14151 953 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCDC30-214ENST00000514642 CC2D2AQ9P2K1 1620 aa9.81□□□□□ -0.84
CCDC30-214ENST00000514642 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
CCDC30-214ENST00000514642 RTF1Q92541 710 aaKnown RBP9.8□□□□□ -0.84
CCDC30-214ENST00000514642 DCAF11Q8TEB1 546 aa9.8□□□□□ -0.84
CCDC30-214ENST00000514642 EIF3AQ14152 1382 aaKnown RBP9.8□□□□□ -0.84
CCDC30-214ENST00000514642 GAPVD1Q14C86 1478 aa9.8□□□□□ -0.84
CCDC30-214ENST00000514642 HNRNPUQ00839 825 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC30-214ENST00000514642 HNRNPMP52272 730 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC30-214ENST00000514642 NGDNQ8NEJ9 315 aaKnown RBP9.78□□□□□ -0.84
CCDC30-214ENST00000514642 U2SURPO15042 1029 aaKnown RBP9.78□□□□□ -0.84
CCDC30-214ENST00000514642 EVA1CP58658 441 aa9.78□□□□□ -0.84
CCDC30-214ENST00000514642 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
CCDC30-214ENST00000514642 TNNT2P45379 298 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms