RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.58	□□□□□ -0.56
RACK1-231	ENST00000514183	CSRNP3	Q8WYN3	585 aa		11.57	□□□□□ -0.56
RACK1-231	ENST00000514183	NPM1	P06748	294 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
RACK1-231	ENST00000514183	NUP160	Q12769	1436 aa		11.56	□□□□□ -0.56
RACK1-231	ENST00000514183	CEP170	Q5SW79	1584 aa		11.56	□□□□□ -0.56
RACK1-231	ENST00000514183	NPM3	O75607	178 aa	Known RBP	11.55	□□□□□ -0.56
RACK1-231	ENST00000514183	SHROOM2	Q13796	1616 aa		11.55	□□□□□ -0.56
RACK1-231	ENST00000514183	FHAD1	B1AJZ9	1412 aa		11.54	□□□□□ -0.56
RACK1-231	ENST00000514183	KIF13A	Q9H1H9	1805 aa		11.53	□□□□□ -0.56
RACK1-231	ENST00000514183	ADAMTS12	P58397	1594 aa		11.53	□□□□□ -0.56
RACK1-231	ENST00000514183	ERICH3	Q5RHP9	1530 aa		11.52	□□□□□ -0.57
RACK1-231	ENST00000514183	ERCC6L2	Q5T890	1561 aa		11.49	□□□□□ -0.57
RACK1-231	ENST00000514183	JPH4	Q96JJ6	628 aa		11.48	□□□□□ -0.57
RACK1-231	ENST00000514183	PRG4	Q92954	1404 aa	Predicted RBP	11.47	□□□□□ -0.57
RACK1-231	ENST00000514183	TOP2B	Q02880	1626 aa		11.47	□□□□□ -0.57
RACK1-231	ENST00000514183	FAM69C	Q0P6D2	419 aa		11.47	□□□□□ -0.57
RACK1-231	ENST00000514183	BIVM-ERCC5	R4GMW8	1640 aa		11.46	□□□□□ -0.57
RACK1-231	ENST00000514183	ABCC10	Q5T3U5	1492 aa		11.46	□□□□□ -0.57
RACK1-231	ENST00000514183	MAPKBP1	O60336	1514 aa		11.46	□□□□□ -0.57
RACK1-231	ENST00000514183	KDM6B	O15054	1643 aa		11.41	□□□□□ -0.58
RACK1-231	ENST00000514183	POTED	Q86YR6	584 aa		11.41	□□□□□ -0.58
RACK1-231	ENST00000514183	DIP2B	Q9P265	1576 aa		11.39	□□□□□ -0.59
RACK1-231	ENST00000514183	MSH5	O43196	834 aa		11.38	□□□□□ -0.59
RACK1-231	ENST00000514183	CNKSR2	Q8WXI2	1034 aa		11.38	□□□□□ -0.59
RACK1-231	ENST00000514183	RUSC2	Q8N2Y8	1516 aa		11.37	□□□□□ -0.59
RACK1-231	ENST00000514183	KIAA0586	Q9BVV6	1533 aa		11.35	□□□□□ -0.59
RACK1-231	ENST00000514183	SCAF1	Q9H7N4	1312 aa	Known RBP	11.35	□□□□□ -0.59
RACK1-231	ENST00000514183	TSPOAP1	O95153	1857 aa		11.35	□□□□□ -0.59
RACK1-231	ENST00000514183	ADCY10	Q96PN6	1610 aa		11.34	□□□□□ -0.59
RACK1-231	ENST00000514183	KDM4F	A0A1W2PPD8	638 aa		11.33	□□□□□ -0.6
RACK1-231	ENST00000514183	CARMIL2	Q6F5E8	1435 aa		11.32	□□□□□ -0.6
RACK1-231	ENST00000514183	CUL7	Q14999	1698 aa		11.32	□□□□□ -0.6
RACK1-231	ENST00000514183	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.31	□□□□□ -0.6
RACK1-231	ENST00000514183	PLB1	Q6P1J6	1458 aa		11.3	□□□□□ -0.6
RACK1-231	ENST00000514183	PTPRG	P23470	1445 aa		11.3	□□□□□ -0.6
RACK1-231	ENST00000514183	ILDR1	Q86SU0	546 aa	Predicted RBP	11.28	□□□□□ -0.6
RACK1-231	ENST00000514183	KIF27	Q86VH2	1401 aa		11.28	□□□□□ -0.6
RACK1-231	ENST00000514183	GLI2	P10070	1586 aa		11.28	□□□□□ -0.6
RACK1-231	ENST00000514183	ABCC2	Q92887	1545 aa		11.27	□□□□□ -0.61
RACK1-231	ENST00000514183	ZBTB22	O15209	634 aa		11.26	□□□□□ -0.61
RACK1-231	ENST00000514183	TEX14	Q8IWB6	1497 aa		11.26	□□□□□ -0.61
RACK1-231	ENST00000514183	TNIK	Q9UKE5	1360 aa		11.26	□□□□□ -0.61
RACK1-231	ENST00000514183	IGF1R	P08069	1367 aa		11.23	□□□□□ -0.61
RACK1-231	ENST00000514183	UHRF1BP1L	A0JNW5	1464 aa		11.23	□□□□□ -0.61
RACK1-231	ENST00000514183	ASXL2	Q76L83	1435 aa		11.22	□□□□□ -0.61
RACK1-231	ENST00000514183	ADGRL1	O94910	1474 aa		11.21	□□□□□ -0.61
RACK1-231	ENST00000514183	UACA	Q9BZF9	1416 aa		11.2	□□□□□ -0.62
RACK1-231	ENST00000514183	CARMIL1	Q5VZK9	1371 aa		11.19	□□□□□ -0.62
RACK1-231	ENST00000514183	IQGAP2	Q13576	1575 aa		11.19	□□□□□ -0.62
RACK1-231	ENST00000514183	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.18	□□□□□ -0.62
RACK1-231	ENST00000514183	PPRC1	Q5VV67	1664 aa	Known RBP	11.18	□□□□□ -0.62
RACK1-231	ENST00000514183	MAP3K4	Q9Y6R4	1608 aa		11.17	□□□□□ -0.62
RACK1-231	ENST00000514183	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.16	□□□□□ -0.62
RACK1-231	ENST00000514183	EPRS	P07814	1512 aa	Known RBP	11.15	□□□□□ -0.62
RACK1-231	ENST00000514183	KDM5B	Q9UGL1	1544 aa		11.15	□□□□□ -0.62
RACK1-231	ENST00000514183	HECW2	Q9P2P5	1572 aa		11.14	□□□□□ -0.63
RACK1-231	ENST00000514183	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.11	□□□□□ -0.63
RACK1-231	ENST00000514183	CFAP43	Q8NDM7	1665 aa		11.1	□□□□□ -0.63
RACK1-231	ENST00000514183	UGGT2	Q9NYU1	1516 aa		11.1	□□□□□ -0.63
RACK1-231	ENST00000514183	WDR7	Q9Y4E6	1490 aa		11.1	□□□□□ -0.63
RACK1-231	ENST00000514183	MAGI3	Q5TCQ9	1506 aa		11.09	□□□□□ -0.63
RACK1-231	ENST00000514183	DISP1	Q96F81	1524 aa		11.09	□□□□□ -0.63
RACK1-231	ENST00000514183	FBXO41	Q8TF61	875 aa		11.09	□□□□□ -0.63
RACK1-231	ENST00000514183	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.08	□□□□□ -0.64
RACK1-231	ENST00000514183	PHLDB1	Q86UU1	1377 aa		11.08	□□□□□ -0.64
RACK1-231	ENST00000514183	GOLGA3	Q08378	1498 aa		11.08	□□□□□ -0.64
RACK1-231	ENST00000514183	RAPGEF2	Q9Y4G8	1499 aa		11.08	□□□□□ -0.64
RACK1-231	ENST00000514183	CD109	Q6YHK3	1445 aa		11.07	□□□□□ -0.64
RACK1-231	ENST00000514183	KIAA0556	O60303	1618 aa		11.06	□□□□□ -0.64
RACK1-231	ENST00000514183	RNF216	Q9NWF9	866 aa	Predicted RBP	11.02	□□□□□ -0.64
RACK1-231	ENST00000514183	FOXD4L1	Q9NU39	408 aa		11.01	□□□□□ -0.65
RACK1-231	ENST00000514183	CTTNBP2	Q8WZ74	1663 aa		11.01	□□□□□ -0.65
RACK1-231	ENST00000514183	ARAP3	Q8WWN8	1544 aa		11.01	□□□□□ -0.65
RACK1-231	ENST00000514183	KCNH8	Q96L42	1107 aa		11.01	□□□□□ -0.65
RACK1-231	ENST00000514183	KIF21B	O75037	1637 aa		10.97	□□□□□ -0.65
RACK1-231	ENST00000514183	ABCA8	O94911	1581 aa		10.97	□□□□□ -0.65
RACK1-231	ENST00000514183	PTPRM	P28827	1452 aa		10.94	□□□□□ -0.66
RACK1-231	ENST00000514183	NEO1	Q92859	1461 aa		10.94	□□□□□ -0.66
RACK1-231	ENST00000514183	ADAMTSL3	P82987	1691 aa		10.94	□□□□□ -0.66
RACK1-231	ENST00000514183	ABCA9	Q8IUA7	1624 aa		10.92	□□□□□ -0.66
RACK1-231	ENST00000514183	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.92	□□□□□ -0.66
RACK1-231	ENST00000514183	POGZ	Q7Z3K3	1410 aa		10.91	□□□□□ -0.66
RACK1-231	ENST00000514183	PCF11	O94913	1555 aa	Known RBP	10.91	□□□□□ -0.66
RACK1-231	ENST00000514183	BCORL1	Q5H9F3	1711 aa		10.9	□□□□□ -0.66
RACK1-231	ENST00000514183	DMRT2	Q9Y5R5	561 aa		10.9	□□□□□ -0.66
RACK1-231	ENST00000514183	CFAP74	Q9C0B2	1584 aa		10.87	□□□□□ -0.67
RACK1-231	ENST00000514183	ATP10B	O94823	1461 aa		10.87	□□□□□ -0.67
RACK1-231	ENST00000514183	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.86	□□□□□ -0.67
RACK1-231	ENST00000514183	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.86	□□□□□ -0.67
RACK1-231	ENST00000514183	RAPGEF3	O95398	923 aa		10.85	□□□□□ -0.67
RACK1-231	ENST00000514183	FANCA	O15360	1455 aa		10.85	□□□□□ -0.67
RACK1-231	ENST00000514183	MADD	Q8WXG6	1647 aa		10.85	□□□□□ -0.67
RACK1-231	ENST00000514183	HOXD11	P31277	338 aa	Predicted RBP	10.84	□□□□□ -0.67
RACK1-231	ENST00000514183	LMTK3	Q96Q04	1460 aa		10.84	□□□□□ -0.67
RACK1-231	ENST00000514183	PRX	Q9BXM0	1461 aa		10.84	□□□□□ -0.67
RACK1-231	ENST00000514183	DENND4B	O75064	1496 aa	Predicted RBP	10.84	□□□□□ -0.67
RACK1-231	ENST00000514183	PLEKHD1	A6NEE1	506 aa		10.84	□□□□□ -0.67
RACK1-231	ENST00000514183	RAPGEF6	Q8TEU7	1601 aa		10.83	□□□□□ -0.68
RACK1-231	ENST00000514183	AKNA	Q7Z591	1439 aa		10.83	□□□□□ -0.68
RACK1-231	ENST00000514183	MAGI2	Q86UL8	1455 aa		10.83	□□□□□ -0.68

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