RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
VCAN-211ENST00000513984 APLP2Q06481 763 aa23.08■■□□□ 1.28
VCAN-211ENST00000513984 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
VCAN-211ENST00000513984 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
VCAN-211ENST00000513984 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
VCAN-211ENST00000513984 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
VCAN-211ENST00000513984 SAMD9Q5K651 1589 aa23■■□□□ 1.27
VCAN-211ENST00000513984 MAP3K1Q13233 1512 aa22.97■■□□□ 1.27
VCAN-211ENST00000513984 PCF11O94913 1555 aaKnown RBP22.94■■□□□ 1.26
VCAN-211ENST00000513984 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
VCAN-211ENST00000513984 CFAP43Q8NDM7 1665 aa22.92■■□□□ 1.26
VCAN-211ENST00000513984 FHOD3Q2V2M9 1422 aa22.92■■□□□ 1.26
VCAN-211ENST00000513984 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
VCAN-211ENST00000513984 IQGAP2Q13576 1575 aa22.9■■□□□ 1.26
VCAN-211ENST00000513984 FYCO1Q9BQS8 1478 aa22.88■■□□□ 1.25
VCAN-211ENST00000513984 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
VCAN-211ENST00000513984 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
VCAN-211ENST00000513984 FMN1Q68DA7 1419 aa22.85■■□□□ 1.25
VCAN-211ENST00000513984 CASKIN1Q8WXD9 1431 aa22.84■■□□□ 1.25
VCAN-211ENST00000513984 P3H3Q8IVL6 736 aa22.83■■□□□ 1.25
VCAN-211ENST00000513984 GRIN2AQ12879 1464 aa22.83■■□□□ 1.24
VCAN-211ENST00000513984 ZEB1P37275 1124 aaPredicted RBP22.8■■□□□ 1.24
VCAN-211ENST00000513984 UGGT2Q9NYU1 1516 aa22.78■■□□□ 1.24
VCAN-211ENST00000513984 SYNJ2O15056 1496 aa22.78■■□□□ 1.24
VCAN-211ENST00000513984 LRRC9Q6ZRR7 1453 aa22.78■■□□□ 1.24
VCAN-211ENST00000513984 KIAA0586Q9BVV6 1533 aa22.76■■□□□ 1.23
VCAN-211ENST00000513984 RRBP1Q9P2E9 1410 aaKnown RBP22.75■■□□□ 1.23
VCAN-211ENST00000513984 LRRIQ1Q96JM4 1722 aa22.75■■□□□ 1.23
VCAN-211ENST00000513984 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
VCAN-211ENST00000513984 KIAA0556O60303 1618 aa22.67■■□□□ 1.22
VCAN-211ENST00000513984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
VCAN-211ENST00000513984 NUP160Q12769 1436 aa22.65■■□□□ 1.22
VCAN-211ENST00000513984 DISP1Q96F81 1524 aa22.63■■□□□ 1.21
VCAN-211ENST00000513984 HECW1Q76N89 1606 aa22.63■■□□□ 1.21
VCAN-211ENST00000513984 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
VCAN-211ENST00000513984 CCNB3Q8WWL7 1395 aa22.62■■□□□ 1.21
VCAN-211ENST00000513984 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
VCAN-211ENST00000513984 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
VCAN-211ENST00000513984 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
VCAN-211ENST00000513984 CCDC18Q5T9S5 1454 aa22.59■■□□□ 1.21
VCAN-211ENST00000513984 PHLDB1Q86UU1 1377 aa22.57■■□□□ 1.2
VCAN-211ENST00000513984 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
VCAN-211ENST00000513984 CHD1O14646 1710 aa22.53■■□□□ 1.2
VCAN-211ENST00000513984 SUPT6HQ7KZ85 1726 aaKnown RBP22.52■■□□□ 1.2
VCAN-211ENST00000513984 FBLN2P98095 1184 aa22.51■■□□□ 1.19
VCAN-211ENST00000513984 EPRSP07814 1512 aaKnown RBP22.5■■□□□ 1.19
VCAN-211ENST00000513984 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
VCAN-211ENST00000513984 RAPGEF6Q8TEU7 1601 aa22.49■■□□□ 1.19
VCAN-211ENST00000513984 MAGI3Q5TCQ9 1506 aa22.47■■□□□ 1.19
VCAN-211ENST00000513984 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
VCAN-211ENST00000513984 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
VCAN-211ENST00000513984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.44■■□□□ 1.18
VCAN-211ENST00000513984 NCOA2Q15596 1464 aa22.43■■□□□ 1.18
VCAN-211ENST00000513984 CDK13Q14004 1512 aaKnown RBP22.43■■□□□ 1.18
VCAN-211ENST00000513984 JPH4Q96JJ6 628 aa22.41■■□□□ 1.18
VCAN-211ENST00000513984 NUP153P49790 1475 aaKnown RBP22.4■■□□□ 1.18
VCAN-211ENST00000513984 FGD6Q6ZV73 1430 aa22.4■■□□□ 1.18
VCAN-211ENST00000513984 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
VCAN-211ENST00000513984 SHROOM2Q13796 1616 aa22.36■■□□□ 1.17
VCAN-211ENST00000513984 FAM50AQ14320 339 aaKnown RBP22.31■■□□□ 1.16
VCAN-211ENST00000513984 PLB1Q6P1J6 1458 aa22.31■■□□□ 1.16
VCAN-211ENST00000513984 ABCA8O94911 1581 aa22.31■■□□□ 1.16
VCAN-211ENST00000513984 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
VCAN-211ENST00000513984 ITGAEP38570 1179 aa22.29■■□□□ 1.16
VCAN-211ENST00000513984 DHX57Q6P158 1386 aaKnown RBP22.29■■□□□ 1.16
VCAN-211ENST00000513984 PRG4Q92954 1404 aaPredicted RBP22.27■■□□□ 1.16
VCAN-211ENST00000513984 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.15
VCAN-211ENST00000513984 TCOF1Q13428 1488 aaKnown RBP22.26■■□□□ 1.15
VCAN-211ENST00000513984 SETD5Q9C0A6 1442 aa22.25■■□□□ 1.15
VCAN-211ENST00000513984 ADCY10Q96PN6 1610 aa22.24■■□□□ 1.15
VCAN-211ENST00000513984 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
VCAN-211ENST00000513984 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
VCAN-211ENST00000513984 MIA2Q96PC5 1412 aa22.22■■□□□ 1.15
VCAN-211ENST00000513984 ARID3CA6NKF2 412 aa22.21■■□□□ 1.15
VCAN-211ENST00000513984 CDK11AQ9UQ88 783 aaPredicted RBP22.2■■□□□ 1.14
VCAN-211ENST00000513984 TROQ12816 1431 aaPredicted RBP22.2■■□□□ 1.14
VCAN-211ENST00000513984 ITSN2Q9NZM3 1697 aa22.16■■□□□ 1.14
VCAN-211ENST00000513984 PTPRGP23470 1445 aa22.16■■□□□ 1.14
VCAN-211ENST00000513984 PTPRKQ15262 1439 aa22.15■■□□□ 1.14
VCAN-211ENST00000513984 KIF14Q15058 1648 aa22.13■■□□□ 1.13
VCAN-211ENST00000513984 ATP10BO94823 1461 aa22.13■■□□□ 1.13
VCAN-211ENST00000513984 HFM1A2PYH4 1435 aa22.12■■□□□ 1.13
VCAN-211ENST00000513984 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
VCAN-211ENST00000513984 GCC2Q8IWJ2 1684 aa22.1■■□□□ 1.13
VCAN-211ENST00000513984 MAPKBP1O60336 1514 aa22.08■■□□□ 1.13
VCAN-211ENST00000513984 DNMT1P26358 1616 aaKnown RBP22.07■■□□□ 1.12
VCAN-211ENST00000513984 UACAQ9BZF9 1416 aa22.07■■□□□ 1.12
VCAN-211ENST00000513984 AKNAQ7Z591 1439 aa22.06■■□□□ 1.12
VCAN-211ENST00000513984 CDC42BPAQ5VT25 1732 aa22.05■■□□□ 1.12
VCAN-211ENST00000513984 NAIPQ13075 1403 aa22.05■■□□□ 1.12
VCAN-211ENST00000513984 ABCC2Q92887 1545 aa22.03■■□□□ 1.12
VCAN-211ENST00000513984 GPATCH8Q9UKJ3 1502 aaKnown RBP22.03■■□□□ 1.12
VCAN-211ENST00000513984 ABCC10Q5T3U5 1492 aa22.02■■□□□ 1.12
VCAN-211ENST00000513984 PLEKHD1A6NEE1 506 aa22■■□□□ 1.11
VCAN-211ENST00000513984 DAPK1P53355 1430 aa21.98■■□□□ 1.11
VCAN-211ENST00000513984 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
VCAN-211ENST00000513984 CROCC2H7BZ55 1655 aa21.97■■□□□ 1.11
VCAN-211ENST00000513984 ABCC5O15440 1437 aa21.95■■□□□ 1.1
VCAN-211ENST00000513984 UHRF1BP1LA0JNW5 1464 aa21.95■■□□□ 1.1
VCAN-211ENST00000513984 ADGBQ8N7X0 1667 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms