RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
PTPN20-229ENST00000513756 BIVM-ERCC5R4GMW8 1640 aa21.83■■□□□ 1.08
PTPN20-229ENST00000513756 MAPKBP1O60336 1514 aa21.8■■□□□ 1.08
PTPN20-229ENST00000513756 DIP2BQ9P265 1576 aa21.75■■□□□ 1.07
PTPN20-229ENST00000513756 KDM4FA0A1W2PPD8 638 aa21.75■■□□□ 1.07
PTPN20-229ENST00000513756 KDM6BO15054 1643 aa21.73■■□□□ 1.07
PTPN20-229ENST00000513756 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
PTPN20-229ENST00000513756 ADCY10Q96PN6 1610 aa21.69■■□□□ 1.06
PTPN20-229ENST00000513756 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
PTPN20-229ENST00000513756 ILDR1Q86SU0 546 aaPredicted RBP21.65■■□□□ 1.06
PTPN20-229ENST00000513756 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
PTPN20-229ENST00000513756 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
PTPN20-229ENST00000513756 PTPRGP23470 1445 aa21.52■■□□□ 1.04
PTPN20-229ENST00000513756 IGF1RP08069 1367 aa21.48■■□□□ 1.03
PTPN20-229ENST00000513756 PLB1Q6P1J6 1458 aa21.46■■□□□ 1.03
PTPN20-229ENST00000513756 CUL7Q14999 1698 aa21.46■■□□□ 1.03
PTPN20-229ENST00000513756 ABCC2Q92887 1545 aa21.45■■□□□ 1.02
PTPN20-229ENST00000513756 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
PTPN20-229ENST00000513756 ADGRL1O94910 1474 aa21.45■■□□□ 1.02
PTPN20-229ENST00000513756 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
PTPN20-229ENST00000513756 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
PTPN20-229ENST00000513756 KIF27Q86VH2 1401 aa21.44■■□□□ 1.02
PTPN20-229ENST00000513756 GLI2P10070 1586 aa21.44■■□□□ 1.02
PTPN20-229ENST00000513756 ASXL2Q76L83 1435 aa21.43■■□□□ 1.02
PTPN20-229ENST00000513756 PPRC1Q5VV67 1664 aaKnown RBP21.4■■□□□ 1.02
PTPN20-229ENST00000513756 UHRF1BP1LA0JNW5 1464 aa21.36■■□□□ 1.01
PTPN20-229ENST00000513756 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
PTPN20-229ENST00000513756 UACAQ9BZF9 1416 aa21.33■■□□□ 1.01
PTPN20-229ENST00000513756 TEX14Q8IWB6 1497 aa21.32■■□□□ 1
PTPN20-229ENST00000513756 HECW2Q9P2P5 1572 aa21.31■■□□□ 1
PTPN20-229ENST00000513756 COL17A1Q9UMD9 1497 aaPredicted RBP21.3■■□□□ 1
PTPN20-229ENST00000513756 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
PTPN20-229ENST00000513756 IQGAP2Q13576 1575 aa21.29■■□□□ 1
PTPN20-229ENST00000513756 MAP3K4Q9Y6R4 1608 aa21.28■■□□□ 1
PTPN20-229ENST00000513756 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
PTPN20-229ENST00000513756 DISP1Q96F81 1524 aa21.21■□□□□ 0.99
PTPN20-229ENST00000513756 ZCCHC11Q5TAX3 1644 aaKnown RBP21.19■□□□□ 0.98
PTPN20-229ENST00000513756 UGGT2Q9NYU1 1516 aa21.14■□□□□ 0.98
PTPN20-229ENST00000513756 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
PTPN20-229ENST00000513756 FBXO41Q8TF61 875 aa21.1■□□□□ 0.97
PTPN20-229ENST00000513756 CD109Q6YHK3 1445 aa21.1■□□□□ 0.97
PTPN20-229ENST00000513756 KIAA0556O60303 1618 aa21.09■□□□□ 0.97
PTPN20-229ENST00000513756 MAGI3Q5TCQ9 1506 aa21.09■□□□□ 0.97
PTPN20-229ENST00000513756 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
PTPN20-229ENST00000513756 CFAP43Q8NDM7 1665 aa21.05■□□□□ 0.96
PTPN20-229ENST00000513756 KCNH8Q96L42 1107 aa21.04■□□□□ 0.96
PTPN20-229ENST00000513756 KIF21BO75037 1637 aa20.97■□□□□ 0.95
PTPN20-229ENST00000513756 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
PTPN20-229ENST00000513756 ARAP3Q8WWN8 1544 aa20.94■□□□□ 0.94
PTPN20-229ENST00000513756 ABCA8O94911 1581 aa20.93■□□□□ 0.94
PTPN20-229ENST00000513756 FAM9AQ8IZU1 332 aaPredicted RBP20.92■□□□□ 0.94
PTPN20-229ENST00000513756 PHLDB1Q86UU1 1377 aa20.9■□□□□ 0.94
PTPN20-229ENST00000513756 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.94
PTPN20-229ENST00000513756 PTPRMP28827 1452 aa20.89■□□□□ 0.94
PTPN20-229ENST00000513756 ADAMTSL3P82987 1691 aa20.86■□□□□ 0.93
PTPN20-229ENST00000513756 ARID4BQ4LE39 1312 aaPredicted RBP20.79■□□□□ 0.92
PTPN20-229ENST00000513756 RAPGEF3O95398 923 aa20.79■□□□□ 0.92
PTPN20-229ENST00000513756 PCF11O94913 1555 aaKnown RBP20.79■□□□□ 0.92
PTPN20-229ENST00000513756 ATP10BO94823 1461 aa20.78■□□□□ 0.92
PTPN20-229ENST00000513756 ABCA9Q8IUA7 1624 aa20.78■□□□□ 0.92
PTPN20-229ENST00000513756 NEO1Q92859 1461 aa20.77■□□□□ 0.92
PTPN20-229ENST00000513756 ARID3CA6NKF2 412 aa20.77■□□□□ 0.92
PTPN20-229ENST00000513756 BCORL1Q5H9F3 1711 aa20.76■□□□□ 0.91
PTPN20-229ENST00000513756 MADDQ8WXG6 1647 aa20.73■□□□□ 0.91
PTPN20-229ENST00000513756 LMTK3Q96Q04 1460 aa20.73■□□□□ 0.91
PTPN20-229ENST00000513756 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
PTPN20-229ENST00000513756 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
PTPN20-229ENST00000513756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
PTPN20-229ENST00000513756 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
PTPN20-229ENST00000513756 FRMPD1Q5SYB0 1578 aa20.66■□□□□ 0.9
PTPN20-229ENST00000513756 RIMS1Q86UR5 1692 aaKnown RBP20.64■□□□□ 0.9
PTPN20-229ENST00000513756 ARHGEF40Q8TER5 1519 aa20.63■□□□□ 0.89
PTPN20-229ENST00000513756 POGZQ7Z3K3 1410 aa20.62■□□□□ 0.89
PTPN20-229ENST00000513756 RAPGEF6Q8TEU7 1601 aa20.62■□□□□ 0.89
PTPN20-229ENST00000513756 DENND4BO75064 1496 aaPredicted RBP20.62■□□□□ 0.89
PTPN20-229ENST00000513756 HSPA2P54652 639 aa20.61■□□□□ 0.89
PTPN20-229ENST00000513756 CERKQ8TCT0 537 aa20.61■□□□□ 0.89
PTPN20-229ENST00000513756 FANCAO15360 1455 aa20.58■□□□□ 0.89
PTPN20-229ENST00000513756 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
PTPN20-229ENST00000513756 AKNAQ7Z591 1439 aa20.58■□□□□ 0.88
PTPN20-229ENST00000513756 FHOD3Q2V2M9 1422 aa20.57■□□□□ 0.88
PTPN20-229ENST00000513756 SAMD9Q5K651 1589 aa20.57■□□□□ 0.88
PTPN20-229ENST00000513756 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
PTPN20-229ENST00000513756 RICTORQ6R327 1708 aa20.56■□□□□ 0.88
PTPN20-229ENST00000513756 CFAP74Q9C0B2 1584 aa20.55■□□□□ 0.88
PTPN20-229ENST00000513756 NUP153P49790 1475 aaKnown RBP20.53■□□□□ 0.88
PTPN20-229ENST00000513756 EFCAB5A4FU69 1503 aa20.51■□□□□ 0.87
PTPN20-229ENST00000513756 MAGI2Q86UL8 1455 aa20.5■□□□□ 0.87
PTPN20-229ENST00000513756 ZMYM4Q5VZL5 1548 aa20.5■□□□□ 0.87
PTPN20-229ENST00000513756 ZFYVE16Q7Z3T8 1539 aa20.5■□□□□ 0.87
PTPN20-229ENST00000513756 MLECQ14165 292 aa20.48■□□□□ 0.87
PTPN20-229ENST00000513756 DISP3Q9P2K9 1392 aa20.46■□□□□ 0.87
PTPN20-229ENST00000513756 YEATS2Q9ULM3 1422 aa20.45■□□□□ 0.86
PTPN20-229ENST00000513756 FER1L4A9Z1Z3 1794 aa20.45■□□□□ 0.86
PTPN20-229ENST00000513756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.45■□□□□ 0.86
PTPN20-229ENST00000513756 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
PTPN20-229ENST00000513756 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
PTPN20-229ENST00000513756 SOCS7O14512 581 aa20.44■□□□□ 0.86
PTPN20-229ENST00000513756 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
PTPN20-229ENST00000513756 SIGLEC1Q9BZZ2 1709 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms