RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
DDR1-267ENST00000512336 MAPKBP1O60336 1514 aa22.08■■□□□ 1.13
DDR1-267ENST00000512336 NPM1P06748 294 aaKnown RBP eCLIP22.08■■□□□ 1.13
DDR1-267ENST00000512336 DIP2BQ9P265 1576 aa22.08■■□□□ 1.12
DDR1-267ENST00000512336 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
DDR1-267ENST00000512336 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
DDR1-267ENST00000512336 ADCY10Q96PN6 1610 aa22.03■■□□□ 1.12
DDR1-267ENST00000512336 KDM4FA0A1W2PPD8 638 aa22.03■■□□□ 1.12
DDR1-267ENST00000512336 KDM6BO15054 1643 aa22.02■■□□□ 1.11
DDR1-267ENST00000512336 TSPOAP1O95153 1857 aa21.92■■□□□ 1.1
DDR1-267ENST00000512336 KIAA0586Q9BVV6 1533 aa21.9■■□□□ 1.1
DDR1-267ENST00000512336 ILDR1Q86SU0 546 aaPredicted RBP21.88■■□□□ 1.09
DDR1-267ENST00000512336 IGF1RP08069 1367 aa21.81■■□□□ 1.08
DDR1-267ENST00000512336 PTPRGP23470 1445 aa21.8■■□□□ 1.08
DDR1-267ENST00000512336 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
DDR1-267ENST00000512336 CUL7Q14999 1698 aa21.77■■□□□ 1.08
DDR1-267ENST00000512336 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
DDR1-267ENST00000512336 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
DDR1-267ENST00000512336 ADGRL1O94910 1474 aa21.74■■□□□ 1.07
DDR1-267ENST00000512336 PPRC1Q5VV67 1664 aaKnown RBP21.74■■□□□ 1.07
DDR1-267ENST00000512336 ASXL2Q76L83 1435 aa21.73■■□□□ 1.07
DDR1-267ENST00000512336 TNIKQ9UKE5 1360 aa21.72■■□□□ 1.07
DDR1-267ENST00000512336 PLB1Q6P1J6 1458 aa21.71■■□□□ 1.07
DDR1-267ENST00000512336 GLI2P10070 1586 aa21.71■■□□□ 1.07
DDR1-267ENST00000512336 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
DDR1-267ENST00000512336 COL17A1Q9UMD9 1497 aaPredicted RBP21.65■■□□□ 1.06
DDR1-267ENST00000512336 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
DDR1-267ENST00000512336 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.06
DDR1-267ENST00000512336 IQGAP2Q13576 1575 aa21.62■■□□□ 1.05
DDR1-267ENST00000512336 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
DDR1-267ENST00000512336 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
DDR1-267ENST00000512336 HECW2Q9P2P5 1572 aa21.6■■□□□ 1.05
DDR1-267ENST00000512336 MAP3K4Q9Y6R4 1608 aa21.58■■□□□ 1.04
DDR1-267ENST00000512336 DISP1Q96F81 1524 aa21.57■■□□□ 1.04
DDR1-267ENST00000512336 TEX14Q8IWB6 1497 aa21.56■■□□□ 1.04
DDR1-267ENST00000512336 KDM5BQ9UGL1 1544 aa21.55■■□□□ 1.04
DDR1-267ENST00000512336 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
DDR1-267ENST00000512336 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
DDR1-267ENST00000512336 WDR7Q9Y4E6 1490 aa21.44■■□□□ 1.02
DDR1-267ENST00000512336 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
DDR1-267ENST00000512336 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.02
DDR1-267ENST00000512336 CD109Q6YHK3 1445 aa21.37■■□□□ 1.01
DDR1-267ENST00000512336 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
DDR1-267ENST00000512336 CFAP43Q8NDM7 1665 aa21.33■■□□□ 1
DDR1-267ENST00000512336 KCNH8Q96L42 1107 aa21.32■■□□□ 1
DDR1-267ENST00000512336 KIF21BO75037 1637 aa21.3■■□□□ 1
DDR1-267ENST00000512336 ABCA8O94911 1581 aa21.27■■□□□ 1
DDR1-267ENST00000512336 FBXO41Q8TF61 875 aa21.26■□□□□ 0.99
DDR1-267ENST00000512336 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
DDR1-267ENST00000512336 CTTNBP2Q8WZ74 1663 aa21.23■□□□□ 0.99
DDR1-267ENST00000512336 ARAP3Q8WWN8 1544 aa21.2■□□□□ 0.98
DDR1-267ENST00000512336 PTPRMP28827 1452 aa21.17■□□□□ 0.98
DDR1-267ENST00000512336 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
DDR1-267ENST00000512336 ADAMTSL3P82987 1691 aa21.15■□□□□ 0.98
DDR1-267ENST00000512336 ATP10BO94823 1461 aa21.1■□□□□ 0.97
DDR1-267ENST00000512336 RAPGEF3O95398 923 aa21.09■□□□□ 0.97
DDR1-267ENST00000512336 ABCA9Q8IUA7 1624 aa21.08■□□□□ 0.97
DDR1-267ENST00000512336 PHLDB1Q86UU1 1377 aa21.08■□□□□ 0.96
DDR1-267ENST00000512336 PCF11O94913 1555 aaKnown RBP21.06■□□□□ 0.96
DDR1-267ENST00000512336 MADDQ8WXG6 1647 aa21.05■□□□□ 0.96
DDR1-267ENST00000512336 BCORL1Q5H9F3 1711 aa21.05■□□□□ 0.96
DDR1-267ENST00000512336 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
DDR1-267ENST00000512336 PRXQ9BXM0 1461 aa21.05■□□□□ 0.96
DDR1-267ENST00000512336 NEO1Q92859 1461 aa21.03■□□□□ 0.96
DDR1-267ENST00000512336 ARID4BQ4LE39 1312 aaPredicted RBP21.03■□□□□ 0.96
DDR1-267ENST00000512336 FRMPD1Q5SYB0 1578 aa21.02■□□□□ 0.96
DDR1-267ENST00000512336 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.96
DDR1-267ENST00000512336 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
DDR1-267ENST00000512336 RIMS1Q86UR5 1692 aaKnown RBP20.95■□□□□ 0.94
DDR1-267ENST00000512336 RAPGEF6Q8TEU7 1601 aa20.94■□□□□ 0.94
DDR1-267ENST00000512336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.94■□□□□ 0.94
DDR1-267ENST00000512336 HNRNPUL2Q1KMD3 747 aaKnown RBP20.94■□□□□ 0.94
DDR1-267ENST00000512336 ARHGEF40Q8TER5 1519 aa20.94■□□□□ 0.94
DDR1-267ENST00000512336 HSPA2P54652 639 aa20.92■□□□□ 0.94
DDR1-267ENST00000512336 SAMD9Q5K651 1589 aa20.92■□□□□ 0.94
DDR1-267ENST00000512336 DENND4BO75064 1496 aaPredicted RBP20.89■□□□□ 0.94
DDR1-267ENST00000512336 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
DDR1-267ENST00000512336 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
DDR1-267ENST00000512336 RICTORQ6R327 1708 aa20.87■□□□□ 0.93
DDR1-267ENST00000512336 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
DDR1-267ENST00000512336 AKNAQ7Z591 1439 aa20.85■□□□□ 0.93
DDR1-267ENST00000512336 POGZQ7Z3K3 1410 aa20.83■□□□□ 0.93
DDR1-267ENST00000512336 FANCAO15360 1455 aa20.82■□□□□ 0.92
DDR1-267ENST00000512336 CERKQ8TCT0 537 aa20.82■□□□□ 0.92
DDR1-267ENST00000512336 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
DDR1-267ENST00000512336 YEATS2Q9ULM3 1422 aa20.8■□□□□ 0.92
DDR1-267ENST00000512336 ZMYM4Q5VZL5 1548 aa20.8■□□□□ 0.92
DDR1-267ENST00000512336 CFAP74Q9C0B2 1584 aa20.8■□□□□ 0.92
DDR1-267ENST00000512336 ZFYVE16Q7Z3T8 1539 aa20.79■□□□□ 0.92
DDR1-267ENST00000512336 PLEKHD1A6NEE1 506 aa20.79■□□□□ 0.92
DDR1-267ENST00000512336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.78■□□□□ 0.929e-7■■■□□ 17.5
DDR1-267ENST00000512336 RANGAP1P46060 587 aaPredicted RBP20.78■□□□□ 0.92
DDR1-267ENST00000512336 MLECQ14165 292 aa20.77■□□□□ 0.92
DDR1-267ENST00000512336 EFCAB5A4FU69 1503 aa20.77■□□□□ 0.92
DDR1-267ENST00000512336 TTC37Q6PGP7 1564 aa20.76■□□□□ 0.91
DDR1-267ENST00000512336 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
DDR1-267ENST00000512336 HECW1Q76N89 1606 aa20.73■□□□□ 0.91
DDR1-267ENST00000512336 MAGI2Q86UL8 1455 aa20.73■□□□□ 0.91
DDR1-267ENST00000512336 FER1L4A9Z1Z3 1794 aa20.72■□□□□ 0.91
DDR1-267ENST00000512336 SCAPERQ9BY12 1400 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms