RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
HOXA4-203ENST00000511914 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
HOXA4-203ENST00000511914 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
HOXA4-203ENST00000511914 CEP170Q5SW79 1584 aa17.52■□□□□ 0.39
HOXA4-203ENST00000511914 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
HOXA4-203ENST00000511914 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
HOXA4-203ENST00000511914 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
HOXA4-203ENST00000511914 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
HOXA4-203ENST00000511914 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
HOXA4-203ENST00000511914 NUP160Q12769 1436 aa17.45■□□□□ 0.38
HOXA4-203ENST00000511914 SHROOM2Q13796 1616 aa17.44■□□□□ 0.38
HOXA4-203ENST00000511914 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
HOXA4-203ENST00000511914 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
HOXA4-203ENST00000511914 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
HOXA4-203ENST00000511914 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
HOXA4-203ENST00000511914 PRG4Q92954 1404 aaPredicted RBP17.33■□□□□ 0.36
HOXA4-203ENST00000511914 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
HOXA4-203ENST00000511914 JPH4Q96JJ6 628 aa17.27■□□□□ 0.36
HOXA4-203ENST00000511914 RNF39Q9H2S5 420 aa17.27■□□□□ 0.36
HOXA4-203ENST00000511914 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
HOXA4-203ENST00000511914 ADCY10Q96PN6 1610 aa17.21■□□□□ 0.35
HOXA4-203ENST00000511914 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
HOXA4-203ENST00000511914 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
HOXA4-203ENST00000511914 DIP2BQ9P265 1576 aa17.18■□□□□ 0.34
HOXA4-203ENST00000511914 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
HOXA4-203ENST00000511914 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
HOXA4-203ENST00000511914 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
HOXA4-203ENST00000511914 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
HOXA4-203ENST00000511914 CUL7Q14999 1698 aa17.15■□□□□ 0.34
HOXA4-203ENST00000511914 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
HOXA4-203ENST00000511914 TTBK1Q5TCY1 1321 aaPredicted RBP17.1■□□□□ 0.33
HOXA4-203ENST00000511914 IGF1RP08069 1367 aa17.1■□□□□ 0.33
HOXA4-203ENST00000511914 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
HOXA4-203ENST00000511914 KDM6BO15054 1643 aa17.1■□□□□ 0.33
HOXA4-203ENST00000511914 EEA1Q15075 1411 aa17.04■□□□□ 0.32
HOXA4-203ENST00000511914 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
HOXA4-203ENST00000511914 PTPRGP23470 1445 aa17■□□□□ 0.31
HOXA4-203ENST00000511914 IQGAP2Q13576 1575 aa16.99■□□□□ 0.31
HOXA4-203ENST00000511914 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
HOXA4-203ENST00000511914 CARMIL2Q6F5E8 1435 aa16.96■□□□□ 0.31
HOXA4-203ENST00000511914 PPRC1Q5VV67 1664 aaKnown RBP16.96■□□□□ 0.31
HOXA4-203ENST00000511914 TNIKQ9UKE5 1360 aa16.95■□□□□ 0.3
HOXA4-203ENST00000511914 KDM4FA0A1W2PPD8 638 aa16.95■□□□□ 0.3
HOXA4-203ENST00000511914 ABCC2Q92887 1545 aa16.95■□□□□ 0.3
HOXA4-203ENST00000511914 ASXL2Q76L83 1435 aa16.93■□□□□ 0.3
HOXA4-203ENST00000511914 DISP1Q96F81 1524 aa16.9■□□□□ 0.3
HOXA4-203ENST00000511914 GLI2P10070 1586 aa16.89■□□□□ 0.29
HOXA4-203ENST00000511914 PLB1Q6P1J6 1458 aa16.88■□□□□ 0.29
HOXA4-203ENST00000511914 ZCCHC11Q5TAX3 1644 aaKnown RBP16.88■□□□□ 0.29
HOXA4-203ENST00000511914 UACAQ9BZF9 1416 aa16.87■□□□□ 0.29
HOXA4-203ENST00000511914 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
HOXA4-203ENST00000511914 UHRF1BP1LA0JNW5 1464 aa16.86■□□□□ 0.29
HOXA4-203ENST00000511914 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
HOXA4-203ENST00000511914 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
HOXA4-203ENST00000511914 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
HOXA4-203ENST00000511914 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
HOXA4-203ENST00000511914 LOC105371045A0A1W2PR82 267 aa16.83■□□□□ 0.28
HOXA4-203ENST00000511914 CTTNBP2Q8WZ74 1663 aa16.83■□□□□ 0.28
HOXA4-203ENST00000511914 EPRSP07814 1512 aaKnown RBP16.82■□□□□ 0.28
HOXA4-203ENST00000511914 UGGT2Q9NYU1 1516 aa16.82■□□□□ 0.28
HOXA4-203ENST00000511914 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
HOXA4-203ENST00000511914 ADGRL1O94910 1474 aa16.8■□□□□ 0.28
HOXA4-203ENST00000511914 COL17A1Q9UMD9 1497 aaPredicted RBP16.8■□□□□ 0.28
HOXA4-203ENST00000511914 TEX14Q8IWB6 1497 aa16.75■□□□□ 0.27
HOXA4-203ENST00000511914 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
HOXA4-203ENST00000511914 KIF21BO75037 1637 aa16.71■□□□□ 0.27
HOXA4-203ENST00000511914 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
HOXA4-203ENST00000511914 NCBP3Q53F19 620 aaKnown RBP16.7■□□□□ 0.26
HOXA4-203ENST00000511914 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
HOXA4-203ENST00000511914 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
HOXA4-203ENST00000511914 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
HOXA4-203ENST00000511914 ABCA8O94911 1581 aa16.67■□□□□ 0.26
HOXA4-203ENST00000511914 HECW2Q9P2P5 1572 aa16.67■□□□□ 0.26
HOXA4-203ENST00000511914 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
HOXA4-203ENST00000511914 CD109Q6YHK3 1445 aa16.64■□□□□ 0.25
HOXA4-203ENST00000511914 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
HOXA4-203ENST00000511914 MAGI3Q5TCQ9 1506 aa16.61■□□□□ 0.25
HOXA4-203ENST00000511914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
HOXA4-203ENST00000511914 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
HOXA4-203ENST00000511914 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
HOXA4-203ENST00000511914 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
HOXA4-203ENST00000511914 ATP10BO94823 1461 aa16.52■□□□□ 0.23
HOXA4-203ENST00000511914 ABCA9Q8IUA7 1624 aa16.51■□□□□ 0.23
HOXA4-203ENST00000511914 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
HOXA4-203ENST00000511914 RAPGEF6Q8TEU7 1601 aa16.5■□□□□ 0.23
HOXA4-203ENST00000511914 SAMD9Q5K651 1589 aa16.5■□□□□ 0.23
HOXA4-203ENST00000511914 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
HOXA4-203ENST00000511914 ARAP3Q8WWN8 1544 aa16.49■□□□□ 0.23
HOXA4-203ENST00000511914 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
HOXA4-203ENST00000511914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
HOXA4-203ENST00000511914 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
HOXA4-203ENST00000511914 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
HOXA4-203ENST00000511914 ADAMTSL3P82987 1691 aa16.43■□□□□ 0.22
HOXA4-203ENST00000511914 FRMPD1Q5SYB0 1578 aa16.42■□□□□ 0.22
HOXA4-203ENST00000511914 CLIP1P30622 1438 aa16.41■□□□□ 0.22
HOXA4-203ENST00000511914 BCORL1Q5H9F3 1711 aa16.41■□□□□ 0.22
HOXA4-203ENST00000511914 PTPRMP28827 1452 aa16.4■□□□□ 0.22
HOXA4-203ENST00000511914 NUP153P49790 1475 aaKnown RBP16.4■□□□□ 0.22
HOXA4-203ENST00000511914 FHOD3Q2V2M9 1422 aa16.39■□□□□ 0.21
HOXA4-203ENST00000511914 MADDQ8WXG6 1647 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms