RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 NUP160Q12769 1436 aa14.83□□□□□ -0.03
NR1I3-228ENST00000511676 JPH4Q96JJ6 628 aa14.83□□□□□ -0.04
NR1I3-228ENST00000511676 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
NR1I3-228ENST00000511676 KIF21BO75037 1637 aa14.81□□□□□ -0.04
NR1I3-228ENST00000511676 ADRA2BP18089 450 aa14.8□□□□□ -0.04
NR1I3-228ENST00000511676 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
NR1I3-228ENST00000511676 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
NR1I3-228ENST00000511676 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
NR1I3-228ENST00000511676 GOLGA3Q08378 1498 aa14.75□□□□□ -0.05
NR1I3-228ENST00000511676 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
NR1I3-228ENST00000511676 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
NR1I3-228ENST00000511676 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
NR1I3-228ENST00000511676 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
NR1I3-228ENST00000511676 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
NR1I3-228ENST00000511676 CUL7Q14999 1698 aa14.69□□□□□ -0.06
NR1I3-228ENST00000511676 FAM69CQ0P6D2 419 aa14.68□□□□□ -0.06
NR1I3-228ENST00000511676 IGF1RP08069 1367 aa14.68□□□□□ -0.06
NR1I3-228ENST00000511676 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
NR1I3-228ENST00000511676 CARMIL2Q6F5E8 1435 aa14.66□□□□□ -0.06
NR1I3-228ENST00000511676 KIAA0586Q9BVV6 1533 aa14.65□□□□□ -0.06
NR1I3-228ENST00000511676 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
NR1I3-228ENST00000511676 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
NR1I3-228ENST00000511676 ABCC10Q5T3U5 1492 aa14.62□□□□□ -0.07
NR1I3-228ENST00000511676 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
NR1I3-228ENST00000511676 MAPKBP1O60336 1514 aa14.6□□□□□ -0.07
NR1I3-228ENST00000511676 PTPRGP23470 1445 aa14.58□□□□□ -0.07
NR1I3-228ENST00000511676 ERCC6L2Q5T890 1561 aa14.58□□□□□ -0.08
NR1I3-228ENST00000511676 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
NR1I3-228ENST00000511676 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
NR1I3-228ENST00000511676 PLB1Q6P1J6 1458 aa14.51□□□□□ -0.09
NR1I3-228ENST00000511676 KIF13AQ9H1H9 1805 aa14.48□□□□□ -0.09
NR1I3-228ENST00000511676 CLIP1P30622 1438 aa14.46□□□□□ -0.09
NR1I3-228ENST00000511676 ABCC2Q92887 1545 aa14.45□□□□□ -0.1
NR1I3-228ENST00000511676 DIP2BQ9P265 1576 aa14.44□□□□□ -0.1
NR1I3-228ENST00000511676 UHRF1BP1LA0JNW5 1464 aa14.44□□□□□ -0.1
NR1I3-228ENST00000511676 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
NR1I3-228ENST00000511676 UACAQ9BZF9 1416 aa14.43□□□□□ -0.1
NR1I3-228ENST00000511676 KDM6BO15054 1643 aa14.43□□□□□ -0.1
NR1I3-228ENST00000511676 ADCY10Q96PN6 1610 aa14.43□□□□□ -0.1
NR1I3-228ENST00000511676 TEX14Q8IWB6 1497 aa14.43□□□□□ -0.1
NR1I3-228ENST00000511676 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
NR1I3-228ENST00000511676 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
NR1I3-228ENST00000511676 IQGAP2Q13576 1575 aa14.41□□□□□ -0.1
NR1I3-228ENST00000511676 ASXL2Q76L83 1435 aa14.39□□□□□ -0.11
NR1I3-228ENST00000511676 GLI2P10070 1586 aa14.38□□□□□ -0.11
NR1I3-228ENST00000511676 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
NR1I3-228ENST00000511676 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
NR1I3-228ENST00000511676 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
NR1I3-228ENST00000511676 UGGT2Q9NYU1 1516 aa14.32□□□□□ -0.12
NR1I3-228ENST00000511676 KDM5BQ9UGL1 1544 aa14.32□□□□□ -0.12
NR1I3-228ENST00000511676 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
NR1I3-228ENST00000511676 KDM4FA0A1W2PPD8 638 aa14.31□□□□□ -0.12
NR1I3-228ENST00000511676 PHLDB1Q86UU1 1377 aa14.31□□□□□ -0.12
NR1I3-228ENST00000511676 TSPOAP1O95153 1857 aa14.3□□□□□ -0.12
NR1I3-228ENST00000511676 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-228ENST00000511676 EPRSP07814 1512 aaKnown RBP14.28□□□□□ -0.12
NR1I3-228ENST00000511676 DISP1Q96F81 1524 aa14.27□□□□□ -0.12
NR1I3-228ENST00000511676 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
NR1I3-228ENST00000511676 WDR7Q9Y4E6 1490 aa14.25□□□□□ -0.13
NR1I3-228ENST00000511676 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
NR1I3-228ENST00000511676 MAP3K1Q13233 1512 aa14.24□□□□□ -0.13
NR1I3-228ENST00000511676 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
NR1I3-228ENST00000511676 KIAA0556O60303 1618 aa14.22□□□□□ -0.13
NR1I3-228ENST00000511676 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
NR1I3-228ENST00000511676 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
NR1I3-228ENST00000511676 MAP3K4Q9Y6R4 1608 aa14.19□□□□□ -0.14
NR1I3-228ENST00000511676 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
NR1I3-228ENST00000511676 ZCCHC11Q5TAX3 1644 aaKnown RBP14.18□□□□□ -0.14
NR1I3-228ENST00000511676 FHOD3Q2V2M9 1422 aa14.16□□□□□ -0.14
NR1I3-228ENST00000511676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
NR1I3-228ENST00000511676 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
NR1I3-228ENST00000511676 ADGRL1O94910 1474 aa14.16□□□□□ -0.14
NR1I3-228ENST00000511676 CFAP43Q8NDM7 1665 aa14.15□□□□□ -0.14
NR1I3-228ENST00000511676 PCF11O94913 1555 aaKnown RBP14.13□□□□□ -0.15
NR1I3-228ENST00000511676 PLEKHD1A6NEE1 506 aa14.13□□□□□ -0.15
NR1I3-228ENST00000511676 APLP2Q06481 763 aa14.13□□□□□ -0.15
NR1I3-228ENST00000511676 RANGAP1P46060 587 aaPredicted RBP14.12□□□□□ -0.15
NR1I3-228ENST00000511676 PPRC1Q5VV67 1664 aaKnown RBP14.1□□□□□ -0.15
NR1I3-228ENST00000511676 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
NR1I3-228ENST00000511676 HECW1Q76N89 1606 aa14.1□□□□□ -0.15
NR1I3-228ENST00000511676 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
NR1I3-228ENST00000511676 ARAP3Q8WWN8 1544 aa14.1□□□□□ -0.15
NR1I3-228ENST00000511676 ABCA8O94911 1581 aa14.09□□□□□ -0.15
NR1I3-228ENST00000511676 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
NR1I3-228ENST00000511676 COL17A1Q9UMD9 1497 aaPredicted RBP14.07□□□□□ -0.16
NR1I3-228ENST00000511676 CDK11AQ9UQ88 783 aaPredicted RBP14.07□□□□□ -0.16
NR1I3-228ENST00000511676 NEO1Q92859 1461 aa14.06□□□□□ -0.16
NR1I3-228ENST00000511676 ILDR1Q86SU0 546 aaPredicted RBP14.04□□□□□ -0.16
NR1I3-228ENST00000511676 P3H3Q8IVL6 736 aa14.04□□□□□ -0.16
NR1I3-228ENST00000511676 ARID4BQ4LE39 1312 aaPredicted RBP14.04□□□□□ -0.16
NR1I3-228ENST00000511676 ATP10BO94823 1461 aa14.04□□□□□ -0.16
NR1I3-228ENST00000511676 POGZQ7Z3K3 1410 aa14.03□□□□□ -0.16
NR1I3-228ENST00000511676 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
NR1I3-228ENST00000511676 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
NR1I3-228ENST00000511676 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
NR1I3-228ENST00000511676 ABCA9Q8IUA7 1624 aa13.97□□□□□ -0.17
NR1I3-228ENST00000511676 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
NR1I3-228ENST00000511676 HECW2Q9P2P5 1572 aa13.96□□□□□ -0.17
NR1I3-228ENST00000511676 FBXO41Q8TF61 875 aa13.96□□□□□ -0.17
NR1I3-228ENST00000511676 DENND4BO75064 1496 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms