RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
POLR2J3-215ENST00000511313 RSPH4AQ5TD94 716 aa14.19□□□□□ -0.14
POLR2J3-215ENST00000511313 WDR62O43379 1518 aa14.18□□□□□ -0.14
POLR2J3-215ENST00000511313 ZNF777Q9ULD5 760 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-215ENST00000511313 POLA1P09884 1462 aaPredicted RBP14.15□□□□□ -0.14
POLR2J3-215ENST00000511313 ABCA10Q8WWZ4 1543 aa14.14□□□□□ -0.15
POLR2J3-215ENST00000511313 AQRO60306 1485 aaKnown RBP eCLIP14.13□□□□□ -0.154e-8■■■■□ 22.5
POLR2J3-215ENST00000511313 DNAJC5Q9H3Z4 198 aa14.12□□□□□ -0.15
POLR2J3-215ENST00000511313 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
POLR2J3-215ENST00000511313 BCANQ96GW7 911 aa14.12□□□□□ -0.15
POLR2J3-215ENST00000511313 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
POLR2J3-215ENST00000511313 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
POLR2J3-215ENST00000511313 CEP162Q5TB80 1403 aa14.09□□□□□ -0.15
POLR2J3-215ENST00000511313 KANK1Q14678 1352 aa14.08□□□□□ -0.16
POLR2J3-215ENST00000511313 FAM69CQ0P6D2 419 aa14.07□□□□□ -0.16
POLR2J3-215ENST00000511313 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
POLR2J3-215ENST00000511313 POGZQ7Z3K3 1410 aa14.06□□□□□ -0.16
POLR2J3-215ENST00000511313 PHLDB1Q86UU1 1377 aa14.06□□□□□ -0.16
POLR2J3-215ENST00000511313 KIAA0586Q9BVV6 1533 aa14.06□□□□□ -0.16
POLR2J3-215ENST00000511313 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
POLR2J3-215ENST00000511313 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
POLR2J3-215ENST00000511313 CCNB3Q8WWL7 1395 aa14.05□□□□□ -0.16
POLR2J3-215ENST00000511313 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-215ENST00000511313 TOP2BQ02880 1626 aa14.02□□□□□ -0.16
POLR2J3-215ENST00000511313 CUL7Q14999 1698 aa14.02□□□□□ -0.17
POLR2J3-215ENST00000511313 ARID3CA6NKF2 412 aa14.02□□□□□ -0.17
POLR2J3-215ENST00000511313 TRIM52Q96A61 297 aa14.01□□□□□ -0.17
POLR2J3-215ENST00000511313 CCDC18Q5T9S5 1454 aa13.99□□□□□ -0.17
POLR2J3-215ENST00000511313 TEX14Q8IWB6 1497 aa13.99□□□□□ -0.17
POLR2J3-215ENST00000511313 IGF1RP08069 1367 aa13.99□□□□□ -0.17
POLR2J3-215ENST00000511313 PLB1Q6P1J6 1458 aa13.98□□□□□ -0.17
POLR2J3-215ENST00000511313 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
POLR2J3-215ENST00000511313 PRDM2Q13029 1718 aa13.93□□□□□ -0.18
POLR2J3-215ENST00000511313 CUX1P39880 1505 aa13.93□□□□□ -0.18
POLR2J3-215ENST00000511313 PPP1R15AO75807 674 aaPredicted RBP13.92□□□□□ -0.18
POLR2J3-215ENST00000511313 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
POLR2J3-215ENST00000511313 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
POLR2J3-215ENST00000511313 EFCAB5A4FU69 1503 aa13.9□□□□□ -0.18
POLR2J3-215ENST00000511313 ITGAEP38570 1179 aa13.89□□□□□ -0.19
POLR2J3-215ENST00000511313 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-215ENST00000511313 KIF21AQ7Z4S6 1674 aa13.86□□□□□ -0.19
POLR2J3-215ENST00000511313 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
POLR2J3-215ENST00000511313 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
POLR2J3-215ENST00000511313 SPAG9O60271 1321 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-215ENST00000511313 EID1Q9Y6B2 187 aa13.83□□□□□ -0.2
POLR2J3-215ENST00000511313 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
POLR2J3-215ENST00000511313 IQGAP2Q13576 1575 aa13.81□□□□□ -0.2
POLR2J3-215ENST00000511313 CHGAP10645 457 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-215ENST00000511313 FOXD1Q16676 465 aa13.8□□□□□ -0.2
POLR2J3-215ENST00000511313 BIVM-ERCC5R4GMW8 1640 aa13.8□□□□□ -0.2
POLR2J3-215ENST00000511313 THOC2Q8NI27 1593 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-215ENST00000511313 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
POLR2J3-215ENST00000511313 C14orf37Q86TY3 774 aa13.77□□□□□ -0.2
POLR2J3-215ENST00000511313 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-215ENST00000511313 EIF4G3O43432 1585 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-215ENST00000511313 ANKRD30AQ9BXX3 1397 aa13.75□□□□□ -0.21
POLR2J3-215ENST00000511313 NUP160Q12769 1436 aa13.73□□□□□ -0.21
POLR2J3-215ENST00000511313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
POLR2J3-215ENST00000511313 AKNAQ7Z591 1439 aa13.71□□□□□ -0.21
POLR2J3-215ENST00000511313 ARHGAP35Q9NRY4 1499 aa13.71□□□□□ -0.21
POLR2J3-215ENST00000511313 CCER1Q8TC90 406 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-215ENST00000511313 CD109Q6YHK3 1445 aa13.7□□□□□ -0.22
POLR2J3-215ENST00000511313 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-215ENST00000511313 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
POLR2J3-215ENST00000511313 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-215ENST00000511313 MLECQ14165 292 aa13.69□□□□□ -0.22
POLR2J3-215ENST00000511313 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.68□□□□□ -0.22
POLR2J3-215ENST00000511313 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
POLR2J3-215ENST00000511313 VPS8Q8N3P4 1428 aa13.67□□□□□ -0.22
POLR2J3-215ENST00000511313 KIF21BO75037 1637 aa13.67□□□□□ -0.22
POLR2J3-215ENST00000511313 HECW1Q76N89 1606 aa13.67□□□□□ -0.22
POLR2J3-215ENST00000511313 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
POLR2J3-215ENST00000511313 PRXQ9BXM0 1461 aa13.64□□□□□ -0.23
POLR2J3-215ENST00000511313 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
POLR2J3-215ENST00000511313 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
POLR2J3-215ENST00000511313 GGT6Q6P531 493 aa13.63□□□□□ -0.23
POLR2J3-215ENST00000511313 NEFMP07197 916 aa13.63□□□□□ -0.23
POLR2J3-215ENST00000511313 SLC4A1APQ9BWU0 796 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-215ENST00000511313 TROQ12816 1431 aaPredicted RBP13.62□□□□□ -0.23
POLR2J3-215ENST00000511313 DENND4BO75064 1496 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-215ENST00000511313 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
POLR2J3-215ENST00000511313 HAP1P54257 671 aaPredicted RBP13.6□□□□□ -0.23
POLR2J3-215ENST00000511313 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
POLR2J3-215ENST00000511313 ABCC2Q92887 1545 aa13.58□□□□□ -0.24
POLR2J3-215ENST00000511313 CDCA8Q53HL2 280 aa13.58□□□□□ -0.24
POLR2J3-215ENST00000511313 MYOM3Q5VTT5 1437 aa13.58□□□□□ -0.24
POLR2J3-215ENST00000511313 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
POLR2J3-215ENST00000511313 KIF3BO15066 747 aa13.58□□□□□ -0.24
POLR2J3-215ENST00000511313 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-215ENST00000511313 ARHGEF11O15085 1522 aa13.58□□□□□ -0.24
POLR2J3-215ENST00000511313 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.24
POLR2J3-215ENST00000511313 HMGB2P26583 209 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-215ENST00000511313 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
POLR2J3-215ENST00000511313 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
POLR2J3-215ENST00000511313 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
POLR2J3-215ENST00000511313 PBRM1Q86U86 1689 aa13.54□□□□□ -0.24
POLR2J3-215ENST00000511313 ASXL2Q76L83 1435 aa13.54□□□□□ -0.24
POLR2J3-215ENST00000511313 ABCA5Q8WWZ7 1642 aa13.54□□□□□ -0.24
POLR2J3-215ENST00000511313 TARBP1Q13395 1621 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-215ENST00000511313 CHIC2Q9UKJ5 165 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms