RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 CEP162Q5TB80 1403 aa9.77□□□□□ -0.85
KDM3B-207ENST00000510866 CUX2O14529 1486 aa9.77□□□□□ -0.85
KDM3B-207ENST00000510866 CEP164Q9UPV0 1460 aa9.77□□□□□ -0.85
KDM3B-207ENST00000510866 ZBTB7CA1YPR0 619 aa9.76□□□□□ -0.85
KDM3B-207ENST00000510866 MROH2BQ7Z745 1585 aa9.74□□□□□ -0.85
KDM3B-207ENST00000510866 A0A0G2JS52 829 aa9.74□□□□□ -0.85
KDM3B-207ENST00000510866 CARMIL1Q5VZK9 1371 aa9.73□□□□□ -0.85
KDM3B-207ENST00000510866 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
KDM3B-207ENST00000510866 RGL3Q3MIN7 710 aa9.72□□□□□ -0.85
KDM3B-207ENST00000510866 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.86
KDM3B-207ENST00000510866 FAM9BQ8IZU0 186 aa9.69□□□□□ -0.86
KDM3B-207ENST00000510866 SALL2Q9Y467 1007 aaPredicted RBP9.69□□□□□ -0.86
KDM3B-207ENST00000510866 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
KDM3B-207ENST00000510866 SOGA1O94964 1423 aa9.69□□□□□ -0.86
KDM3B-207ENST00000510866 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
KDM3B-207ENST00000510866 WDR43Q15061 677 aaKnown RBP eCLIP9.68□□□□□ -0.86
KDM3B-207ENST00000510866 CCNB3Q8WWL7 1395 aa9.68□□□□□ -0.86
KDM3B-207ENST00000510866 MLECQ14165 292 aa9.68□□□□□ -0.86
KDM3B-207ENST00000510866 TMC1Q8TDI8 760 aa9.68□□□□□ -0.86
KDM3B-207ENST00000510866 MYO15BQ96JP2 1530 aa9.67□□□□□ -0.86
KDM3B-207ENST00000510866 TDRD9Q8NDG6 1382 aaKnown RBP9.66□□□□□ -0.86
KDM3B-207ENST00000510866 CARMIL2Q6F5E8 1435 aa9.65□□□□□ -0.86
KDM3B-207ENST00000510866 ABCC8Q09428 1581 aa9.65□□□□□ -0.86
KDM3B-207ENST00000510866 WIZO95785 1651 aa9.65□□□□□ -0.86
KDM3B-207ENST00000510866 ACIN1Q9UKV3 1341 aaKnown RBP9.65□□□□□ -0.86
KDM3B-207ENST00000510866 FHAD1B1AJZ9 1412 aa9.65□□□□□ -0.87
KDM3B-207ENST00000510866 HIRIP3Q9BW71 556 aaPredicted RBP9.64□□□□□ -0.87
KDM3B-207ENST00000510866 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
KDM3B-207ENST00000510866 TOP2AP11388 1531 aaKnown RBP9.63□□□□□ -0.87
KDM3B-207ENST00000510866 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
KDM3B-207ENST00000510866 GTF3C3Q9Y5Q9 886 aa9.63□□□□□ -0.87
KDM3B-207ENST00000510866 EIF5BO60841 1220 aaKnown RBP9.62□□□□□ -0.87
KDM3B-207ENST00000510866 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
KDM3B-207ENST00000510866 KANK1Q14678 1352 aa9.62□□□□□ -0.87
KDM3B-207ENST00000510866 NPM2Q86SE8 214 aaKnown RBP9.61□□□□□ -0.87
KDM3B-207ENST00000510866 POGKQ9P215 609 aa9.61□□□□□ -0.87
KDM3B-207ENST00000510866 LMOD2Q6P5Q4 547 aa9.6□□□□□ -0.87
KDM3B-207ENST00000510866 MRS2Q9HD23 443 aa9.59□□□□□ -0.87
KDM3B-207ENST00000510866 ATAD2BQ9ULI0 1458 aa9.58□□□□□ -0.88
KDM3B-207ENST00000510866 CARD11Q9BXL7 1154 aa9.58□□□□□ -0.88
KDM3B-207ENST00000510866 SMARCA4P51532 1647 aa9.57□□□□□ -0.88
KDM3B-207ENST00000510866 PPM1GO15355 546 aaPredicted RBP9.57□□□□□ -0.88
KDM3B-207ENST00000510866 CDCA8Q53HL2 280 aa9.57□□□□□ -0.88
KDM3B-207ENST00000510866 GGT6Q6P531 493 aa9.57□□□□□ -0.88
KDM3B-207ENST00000510866 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.56□□□□□ -0.88
KDM3B-207ENST00000510866 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
KDM3B-207ENST00000510866 CFAP53Q96M91 514 aa9.54□□□□□ -0.88
KDM3B-207ENST00000510866 KNSTRNQ9Y448 316 aa9.54□□□□□ -0.88
KDM3B-207ENST00000510866 FANCD2Q9BXW9 1451 aa9.54□□□□□ -0.88
KDM3B-207ENST00000510866 GLIPR1L2Q4G1C9 344 aa9.53□□□□□ -0.88
KDM3B-207ENST00000510866 ARHGAP35Q9NRY4 1499 aa9.53□□□□□ -0.88
KDM3B-207ENST00000510866 FKBP8Q14318 412 aa9.53□□□□□ -0.88
KDM3B-207ENST00000510866 ARXQ96QS3 562 aa9.52□□□□□ -0.89
KDM3B-207ENST00000510866 EFCAB2Q5VUJ9 269 aa9.51□□□□□ -0.89
KDM3B-207ENST00000510866 FMN1Q68DA7 1419 aa9.51□□□□□ -0.89
KDM3B-207ENST00000510866 ANP32AP39687 249 aaKnown RBP9.5□□□□□ -0.89
KDM3B-207ENST00000510866 SIN3AQ96ST3 1273 aa9.5□□□□□ -0.89
KDM3B-207ENST00000510866 MYH16Q9H6N6 1097 aa9.5□□□□□ -0.89
KDM3B-207ENST00000510866 DCAF11Q8TEB1 546 aa9.5□□□□□ -0.89
KDM3B-207ENST00000510866 RAPGEF2Q9Y4G8 1499 aa9.49□□□□□ -0.89
KDM3B-207ENST00000510866 HSP90AA1P07900 732 aaKnown RBP9.49□□□□□ -0.89
KDM3B-207ENST00000510866 UPF2Q9HAU5 1272 aaKnown RBP9.49□□□□□ -0.89
KDM3B-207ENST00000510866 JPH4Q96JJ6 628 aa9.49□□□□□ -0.89
KDM3B-207ENST00000510866 TNNT2P45379 298 aaPredicted RBP9.48□□□□□ -0.89
KDM3B-207ENST00000510866 SAFB2Q14151 953 aaKnown RBP eCLIP9.48□□□□□ -0.89
KDM3B-207ENST00000510866 CYB5RLQ6IPT4 315 aa9.47□□□□□ -0.89
KDM3B-207ENST00000510866 SRPK2P78362 688 aaKnown RBP9.47□□□□□ -0.89
KDM3B-207ENST00000510866 OSCARQ8IYS5 282 aa9.47□□□□□ -0.89
KDM3B-207ENST00000510866 STK26Q9P289 416 aa9.46□□□□□ -0.89
KDM3B-207ENST00000510866 VPS8Q8N3P4 1428 aa9.46□□□□□ -0.89
KDM3B-207ENST00000510866 FHOD3Q2V2M9 1422 aa9.46□□□□□ -0.89
KDM3B-207ENST00000510866 MAPK8IP3Q9UPT6 1336 aa9.46□□□□□ -0.9
KDM3B-207ENST00000510866 LAS1LQ9Y4W2 734 aaKnown RBP9.46□□□□□ -0.9
KDM3B-207ENST00000510866 CCDC136Q96JN2 1154 aa9.45□□□□□ -0.9
KDM3B-207ENST00000510866 HNRNPMP52272 730 aaKnown RBP eCLIP9.45□□□□□ -0.9
KDM3B-207ENST00000510866 NUDCQ9Y266 331 aa9.45□□□□□ -0.9
KDM3B-207ENST00000510866 SOX12O15370 315 aa9.45□□□□□ -0.9
KDM3B-207ENST00000510866 PKD2Q13563 968 aa9.45□□□□□ -0.9
KDM3B-207ENST00000510866 KANK4Q5T7N3 995 aaPredicted RBP9.45□□□□□ -0.9
KDM3B-207ENST00000510866 SENP3-EIF4A1A0A087X0R7 540 aa9.45□□□□□ -0.9
KDM3B-207ENST00000510866 CC2D1BQ5T0F9 858 aaKnown RBP9.45□□□□□ -0.9
KDM3B-207ENST00000510866 TMF1P82094 1093 aa9.44□□□□□ -0.9
KDM3B-207ENST00000510866 KIF3BO15066 747 aa9.44□□□□□ -0.9
KDM3B-207ENST00000510866 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
KDM3B-207ENST00000510866 ANKRD30AQ9BXX3 1397 aa9.43□□□□□ -0.9
KDM3B-207ENST00000510866 NPHP1O15259 732 aa9.43□□□□□ -0.9
KDM3B-207ENST00000510866 MIER1Q8N108 512 aa9.43□□□□□ -0.9
KDM3B-207ENST00000510866 FOXD1Q16676 465 aa9.42□□□□□ -0.9
KDM3B-207ENST00000510866 SETD5Q9C0A6 1442 aa9.42□□□□□ -0.9
KDM3B-207ENST00000510866 SPAG9O60271 1321 aaKnown RBP9.42□□□□□ -0.9
KDM3B-207ENST00000510866 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
KDM3B-207ENST00000510866 CCDC18Q5T9S5 1454 aa9.41□□□□□ -0.9
KDM3B-207ENST00000510866 NUP155O75694 1391 aa9.41□□□□□ -0.9
KDM3B-207ENST00000510866 IRX6P78412 446 aaPredicted RBP9.41□□□□□ -0.9
KDM3B-207ENST00000510866 PTPRGP23470 1445 aa9.41□□□□□ -0.9
KDM3B-207ENST00000510866 WASHC2CQ9Y4E1 1318 aa9.4□□□□□ -0.9
KDM3B-207ENST00000510866 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
KDM3B-207ENST00000510866 EID1Q9Y6B2 187 aa9.39□□□□□ -0.91
KDM3B-207ENST00000510866 GAPVD1Q14C86 1478 aa9.39□□□□□ -0.91
KDM3B-207ENST00000510866 FGD5Q6ZNL6 1462 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms