RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
NEK1-206ENST00000510533 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
NEK1-206ENST00000510533 ANP32EQ9BTT0 268 aa13.97□□□□□ -0.17
NEK1-206ENST00000510533 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
NEK1-206ENST00000510533 RRP7BPQ9NSQ0 103 aa13.95□□□□□ -0.18
NEK1-206ENST00000510533 NCLP19338 710 aaKnown RBP13.93□□□□□ -0.18
NEK1-206ENST00000510533 GOLGA6L22H0YM25 854 aa13.93□□□□□ -0.18
NEK1-206ENST00000510533 SUPT16HQ9Y5B9 1047 aaKnown RBP13.9□□□□□ -0.18
NEK1-206ENST00000510533 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
NEK1-206ENST00000510533 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
NEK1-206ENST00000510533 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
NEK1-206ENST00000510533 PPM1GO15355 546 aaPredicted RBP13.88□□□□□ -0.19
NEK1-206ENST00000510533 EEA1Q15075 1411 aa13.87□□□□□ -0.19
NEK1-206ENST00000510533 CDK11BP21127 795 aaKnown RBP13.86□□□□□ -0.19
NEK1-206ENST00000510533 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
NEK1-206ENST00000510533 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
NEK1-206ENST00000510533 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
NEK1-206ENST00000510533 CDCA8Q53HL2 280 aa13.84□□□□□ -0.19
NEK1-206ENST00000510533 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.19
NEK1-206ENST00000510533 KNSTRNQ9Y448 316 aa13.83□□□□□ -0.19
NEK1-206ENST00000510533 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.2
NEK1-206ENST00000510533 RGL3Q3MIN7 710 aa13.83□□□□□ -0.2
NEK1-206ENST00000510533 PTMAP06454 111 aaKnown RBP13.82□□□□□ -0.2
NEK1-206ENST00000510533 ERICH6BQ5W0A0 696 aa13.81□□□□□ -0.2
NEK1-206ENST00000510533 CCDC180Q9P1Z9 1646 aa13.81□□□□□ -0.2
NEK1-206ENST00000510533 CASC1Q6TDU7 716 aa13.81□□□□□ -0.2
NEK1-206ENST00000510533 FTSJ3Q8IY81 847 aaKnown RBP13.81□□□□□ -0.2
NEK1-206ENST00000510533 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
NEK1-206ENST00000510533 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
NEK1-206ENST00000510533 PPP1R15AO75807 674 aaPredicted RBP13.79□□□□□ -0.2
NEK1-206ENST00000510533 ZBTB7CA1YPR0 619 aa13.79□□□□□ -0.2
NEK1-206ENST00000510533 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
NEK1-206ENST00000510533 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
NEK1-206ENST00000510533 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
NEK1-206ENST00000510533 SENP3Q9H4L4 574 aaPredicted RBP13.77□□□□□ -0.2
NEK1-206ENST00000510533 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
NEK1-206ENST00000510533 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
NEK1-206ENST00000510533 DNTTIP2Q5QJE6 756 aaKnown RBP13.76□□□□□ -0.21
NEK1-206ENST00000510533 A0A0G2JS52 829 aa13.75□□□□□ -0.21
NEK1-206ENST00000510533 KCNH8Q96L42 1107 aa13.75□□□□□ -0.21
NEK1-206ENST00000510533 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
NEK1-206ENST00000510533 RGS3P49796 1198 aa13.75□□□□□ -0.21
NEK1-206ENST00000510533 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
NEK1-206ENST00000510533 CFDP1Q9UEE9 299 aaPredicted RBP13.74□□□□□ -0.21
NEK1-206ENST00000510533 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
NEK1-206ENST00000510533 SIN3AQ96ST3 1273 aa13.73□□□□□ -0.21
NEK1-206ENST00000510533 NAP1L5Q96NT1 182 aaPredicted RBP13.72□□□□□ -0.21
NEK1-206ENST00000510533 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
NEK1-206ENST00000510533 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.21
NEK1-206ENST00000510533 NUDCQ9Y266 331 aa13.71□□□□□ -0.21
NEK1-206ENST00000510533 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.22
NEK1-206ENST00000510533 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.22
NEK1-206ENST00000510533 CEP164Q9UPV0 1460 aa13.7□□□□□ -0.22
NEK1-206ENST00000510533 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
NEK1-206ENST00000510533 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
NEK1-206ENST00000510533 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
NEK1-206ENST00000510533 MS4A1P11836 297 aa13.68□□□□□ -0.22
NEK1-206ENST00000510533 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
NEK1-206ENST00000510533 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
NEK1-206ENST00000510533 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
NEK1-206ENST00000510533 PLCB2Q00722 1185 aa13.65□□□□□ -0.22
NEK1-206ENST00000510533 CCER2I3L3R5 266 aa13.62□□□□□ -0.23
NEK1-206ENST00000510533 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
NEK1-206ENST00000510533 POGKQ9P215 609 aa13.61□□□□□ -0.23
NEK1-206ENST00000510533 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
NEK1-206ENST00000510533 HSCBQ8IWL3 235 aa13.61□□□□□ -0.23
NEK1-206ENST00000510533 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
NEK1-206ENST00000510533 U2SURPO15042 1029 aaKnown RBP13.6□□□□□ -0.23
NEK1-206ENST00000510533 TMF1P82094 1093 aa13.6□□□□□ -0.23
NEK1-206ENST00000510533 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
NEK1-206ENST00000510533 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
NEK1-206ENST00000510533 HAP1P54257 671 aaPredicted RBP13.58□□□□□ -0.24
NEK1-206ENST00000510533 OS9Q13438 667 aaPredicted RBP13.58□□□□□ -0.24
NEK1-206ENST00000510533 DEKP35659 375 aaKnown RBP13.58□□□□□ -0.24
NEK1-206ENST00000510533 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.24
NEK1-206ENST00000510533 FGD1P98174 961 aa13.58□□□□□ -0.24
NEK1-206ENST00000510533 NRDCO43847 1150 aa13.57□□□□□ -0.24
NEK1-206ENST00000510533 KCNJ4P48050 445 aa13.56□□□□□ -0.24
NEK1-206ENST00000510533 DCAF11Q8TEB1 546 aa13.56□□□□□ -0.24
NEK1-206ENST00000510533 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
NEK1-206ENST00000510533 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
NEK1-206ENST00000510533 RB1CC1Q8TDY2 1594 aa13.55□□□□□ -0.24
NEK1-206ENST00000510533 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
NEK1-206ENST00000510533 GOLGA6L4A6NEF3 574 aa13.54□□□□□ -0.24
NEK1-206ENST00000510533 MSNP26038 577 aaKnown RBP13.53□□□□□ -0.24
NEK1-206ENST00000510533 CHAF1AQ13111 956 aaPredicted RBP13.53□□□□□ -0.24
NEK1-206ENST00000510533 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
NEK1-206ENST00000510533 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
NEK1-206ENST00000510533 MCCP23508 829 aa13.52□□□□□ -0.25
NEK1-206ENST00000510533 NAP1L2Q9ULW6 460 aaPredicted RBP13.51□□□□□ -0.25
NEK1-206ENST00000510533 CFAP44Q96MT7 982 aa13.51□□□□□ -0.25
NEK1-206ENST00000510533 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
NEK1-206ENST00000510533 SETD5Q9C0A6 1442 aa13.5□□□□□ -0.25
NEK1-206ENST00000510533 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
NEK1-206ENST00000510533 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
NEK1-206ENST00000510533 MORC1Q86VD1 984 aa13.5□□□□□ -0.25
NEK1-206ENST00000510533 KTN1Q86UP2 1357 aaKnown RBP13.48□□□□□ -0.25
NEK1-206ENST00000510533 KANK1Q14678 1352 aa13.46□□□□□ -0.25
NEK1-206ENST00000510533 SRPK2P78362 688 aaKnown RBP13.45□□□□□ -0.26
NEK1-206ENST00000510533 RCAN3Q9UKA8 241 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms