RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 HMGXB3Q12766 1538 aa16.95■□□□□ 0.3
RETREG1-206ENST00000510362 SPOCK2Q92563 424 aa16.93■□□□□ 0.3
RETREG1-206ENST00000510362 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
RETREG1-206ENST00000510362 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
RETREG1-206ENST00000510362 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
RETREG1-206ENST00000510362 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
RETREG1-206ENST00000510362 MNX1P50219 401 aaPredicted RBP16.76■□□□□ 0.27
RETREG1-206ENST00000510362 PKD2Q13563 968 aa16.76■□□□□ 0.27
RETREG1-206ENST00000510362 WIZO95785 1651 aa16.75■□□□□ 0.27
RETREG1-206ENST00000510362 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
RETREG1-206ENST00000510362 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
RETREG1-206ENST00000510362 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
RETREG1-206ENST00000510362 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
RETREG1-206ENST00000510362 NUBP1P53384 320 aa16.66■□□□□ 0.26
RETREG1-206ENST00000510362 CIZ1Q9ULV3 898 aaPredicted RBP16.62■□□□□ 0.25
RETREG1-206ENST00000510362 PRKAR2AP13861 404 aaKnown RBP16.61■□□□□ 0.25
RETREG1-206ENST00000510362 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
RETREG1-206ENST00000510362 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
RETREG1-206ENST00000510362 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
RETREG1-206ENST00000510362 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
RETREG1-206ENST00000510362 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
RETREG1-206ENST00000510362 PIP4P2Q8N4L2 257 aa16.57■□□□□ 0.24
RETREG1-206ENST00000510362 NESP48681 1621 aa16.56■□□□□ 0.24
RETREG1-206ENST00000510362 FARP1Q9Y4F1 1045 aaPredicted RBP16.54■□□□□ 0.24
RETREG1-206ENST00000510362 GSE1Q14687 1217 aa16.52■□□□□ 0.24
RETREG1-206ENST00000510362 RASEFQ8IZ41 740 aa16.52■□□□□ 0.24
RETREG1-206ENST00000510362 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
RETREG1-206ENST00000510362 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
RETREG1-206ENST00000510362 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
RETREG1-206ENST00000510362 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
RETREG1-206ENST00000510362 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
RETREG1-206ENST00000510362 CUX2O14529 1486 aa16.44■□□□□ 0.22
RETREG1-206ENST00000510362 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
RETREG1-206ENST00000510362 RGL2O15211 777 aa16.43■□□□□ 0.22
RETREG1-206ENST00000510362 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
RETREG1-206ENST00000510362 CFTRP13569 1480 aa16.38■□□□□ 0.21
RETREG1-206ENST00000510362 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
RETREG1-206ENST00000510362 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
RETREG1-206ENST00000510362 TSPYL2Q9H2G4 693 aaPredicted RBP16.34■□□□□ 0.21
RETREG1-206ENST00000510362 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
RETREG1-206ENST00000510362 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
RETREG1-206ENST00000510362 RNF25Q96BH1 459 aaPredicted RBP16.3■□□□□ 0.2
RETREG1-206ENST00000510362 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
RETREG1-206ENST00000510362 PYGBP11216 843 aa16.27■□□□□ 0.2
RETREG1-206ENST00000510362 CHRM1P11229 460 aaPredicted RBP16.27■□□□□ 0.2
RETREG1-206ENST00000510362 WDR62O43379 1518 aa16.25■□□□□ 0.19
RETREG1-206ENST00000510362 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
RETREG1-206ENST00000510362 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
RETREG1-206ENST00000510362 RIOK3O14730 519 aaKnown RBP16.18■□□□□ 0.18
RETREG1-206ENST00000510362 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
RETREG1-206ENST00000510362 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
RETREG1-206ENST00000510362 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
RETREG1-206ENST00000510362 CHGAP10645 457 aaKnown RBP16.12■□□□□ 0.17
RETREG1-206ENST00000510362 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
RETREG1-206ENST00000510362 SLC24A1O60721 1099 aa16.09■□□□□ 0.17
RETREG1-206ENST00000510362 TAOK2Q9UL54 1235 aa16.09■□□□□ 0.17
RETREG1-206ENST00000510362 C19orf67A6NJJ6 358 aa16.08■□□□□ 0.16
RETREG1-206ENST00000510362 VGFO15240 615 aaPredicted RBP16.08■□□□□ 0.16
RETREG1-206ENST00000510362 BBXQ8WY36 941 aaPredicted RBP16.07■□□□□ 0.16
RETREG1-206ENST00000510362 ABCC8Q09428 1581 aa16.07■□□□□ 0.16
RETREG1-206ENST00000510362 HS6ST3Q8IZP7 471 aa16.06■□□□□ 0.16
RETREG1-206ENST00000510362 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
RETREG1-206ENST00000510362 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
RETREG1-206ENST00000510362 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
RETREG1-206ENST00000510362 PLCB2Q00722 1185 aa16.03■□□□□ 0.16
RETREG1-206ENST00000510362 KIF12Q96FN5 646 aa16.03■□□□□ 0.16
RETREG1-206ENST00000510362 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
RETREG1-206ENST00000510362 PCDHB8Q9UN66 801 aa16.01■□□□□ 0.15
RETREG1-206ENST00000510362 PCDHB13Q9Y5F0 798 aa16.01■□□□□ 0.15
RETREG1-206ENST00000510362 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
RETREG1-206ENST00000510362 MAP3K13O43283 966 aa16■□□□□ 0.15
RETREG1-206ENST00000510362 ZFP91Q96JP5 570 aaPredicted RBP16■□□□□ 0.15
RETREG1-206ENST00000510362 PHF12Q96QT6 1004 aa16■□□□□ 0.15
RETREG1-206ENST00000510362 ZNF579Q8NAF0 562 aaKnown RBP15.99■□□□□ 0.15
RETREG1-206ENST00000510362 STK25O00506 426 aa15.98■□□□□ 0.15
RETREG1-206ENST00000510362 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.98■□□□□ 0.15
RETREG1-206ENST00000510362 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
RETREG1-206ENST00000510362 IFNL1Q8IU54 200 aa15.95■□□□□ 0.14
RETREG1-206ENST00000510362 BCL11BQ9C0K0 894 aaPredicted RBP15.93■□□□□ 0.14
RETREG1-206ENST00000510362 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
RETREG1-206ENST00000510362 HAX1O00165 279 aa15.92■□□□□ 0.14
RETREG1-206ENST00000510362 PDAP1Q13442 181 aaKnown RBP15.92■□□□□ 0.14
RETREG1-206ENST00000510362 STK24Q9Y6E0 443 aa15.91■□□□□ 0.14
RETREG1-206ENST00000510362 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
RETREG1-206ENST00000510362 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
RETREG1-206ENST00000510362 PAXIP1Q6ZW49 1069 aaPredicted RBP15.88■□□□□ 0.13
RETREG1-206ENST00000510362 PSEN1P49768 467 aa15.87■□□□□ 0.13
RETREG1-206ENST00000510362 CUX1P39880 1505 aa15.87■□□□□ 0.13
RETREG1-206ENST00000510362 EVX2Q03828 476 aa15.86■□□□□ 0.13
RETREG1-206ENST00000510362 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
RETREG1-206ENST00000510362 EIF4G3O43432 1585 aaKnown RBP15.86■□□□□ 0.13
RETREG1-206ENST00000510362 NKX1-1Q15270 411 aaPredicted RBP15.85■□□□□ 0.13
RETREG1-206ENST00000510362 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
RETREG1-206ENST00000510362 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
RETREG1-206ENST00000510362 WDR97A6NE52 1622 aa15.83■□□□□ 0.13
RETREG1-206ENST00000510362 POTEHQ6S545 545 aa15.83■□□□□ 0.12
RETREG1-206ENST00000510362 SPRYD3Q8NCJ5 442 aa15.83■□□□□ 0.12
RETREG1-206ENST00000510362 MS4A3Q96HJ5 214 aa15.83■□□□□ 0.12
RETREG1-206ENST00000510362 SOGA1O94964 1423 aa15.81■□□□□ 0.12
RETREG1-206ENST00000510362 HAP1P54257 671 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms