RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 FARP1Q9Y4F1 1045 aaPredicted RBP16.15■□□□□ 0.18
CAST-231ENST00000510245 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
CAST-231ENST00000510245 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
CAST-231ENST00000510245 HAX1O00165 279 aa16.03■□□□□ 0.16
CAST-231ENST00000510245 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
CAST-231ENST00000510245 KLHL34Q8N239 644 aa16.02■□□□□ 0.16
CAST-231ENST00000510245 ZBTB47Q9UFB7 747 aaPredicted RBP16.01■□□□□ 0.15
CAST-231ENST00000510245 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
CAST-231ENST00000510245 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
CAST-231ENST00000510245 C19orf67A6NJJ6 358 aa15.9■□□□□ 0.14
CAST-231ENST00000510245 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
CAST-231ENST00000510245 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
CAST-231ENST00000510245 NESP48681 1621 aa15.85■□□□□ 0.13
CAST-231ENST00000510245 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
CAST-231ENST00000510245 EVX2Q03828 476 aa15.83■□□□□ 0.12
CAST-231ENST00000510245 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
CAST-231ENST00000510245 TSPYL2Q9H2G4 693 aaPredicted RBP15.81■□□□□ 0.12
CAST-231ENST00000510245 NUBP1P53384 320 aa15.8■□□□□ 0.12
CAST-231ENST00000510245 SPOCK2Q92563 424 aa15.8■□□□□ 0.12
CAST-231ENST00000510245 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
CAST-231ENST00000510245 RASEFQ8IZ41 740 aa15.79■□□□□ 0.12
CAST-231ENST00000510245 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
CAST-231ENST00000510245 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
CAST-231ENST00000510245 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
CAST-231ENST00000510245 FAM212AQ96EL1 285 aa15.71■□□□□ 0.11
CAST-231ENST00000510245 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
CAST-231ENST00000510245 SP7Q8TDD2 431 aaPredicted RBP15.66■□□□□ 0.1
CAST-231ENST00000510245 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
CAST-231ENST00000510245 GSE1Q14687 1217 aa15.62■□□□□ 0.09
CAST-231ENST00000510245 ZNF579Q8NAF0 562 aaKnown RBP15.62■□□□□ 0.09
CAST-231ENST00000510245 PHF12Q96QT6 1004 aa15.62■□□□□ 0.09
CAST-231ENST00000510245 CCDC61Q9Y6R9 512 aa15.61■□□□□ 0.09
CAST-231ENST00000510245 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
CAST-231ENST00000510245 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
CAST-231ENST00000510245 HMGXB3Q12766 1538 aa15.57■□□□□ 0.08
CAST-231ENST00000510245 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
CAST-231ENST00000510245 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
CAST-231ENST00000510245 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
CAST-231ENST00000510245 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
CAST-231ENST00000510245 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
CAST-231ENST00000510245 GABBR2O75899 941 aa15.52■□□□□ 0.08
CAST-231ENST00000510245 PYGBP11216 843 aa15.52■□□□□ 0.08
CAST-231ENST00000510245 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
CAST-231ENST00000510245 KIF12Q96FN5 646 aa15.48■□□□□ 0.07
CAST-231ENST00000510245 CLCN6P51797 869 aa15.47■□□□□ 0.07
CAST-231ENST00000510245 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
CAST-231ENST00000510245 WDR62O43379 1518 aa15.45■□□□□ 0.06
CAST-231ENST00000510245 MAP3K13O43283 966 aa15.45■□□□□ 0.06
CAST-231ENST00000510245 GALR2O43603 387 aaPredicted RBP15.43■□□□□ 0.06
CAST-231ENST00000510245 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
CAST-231ENST00000510245 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
CAST-231ENST00000510245 MS4A3Q96HJ5 214 aa15.41■□□□□ 0.06
CAST-231ENST00000510245 PCDHB13Q9Y5F0 798 aa15.41■□□□□ 0.06
CAST-231ENST00000510245 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
CAST-231ENST00000510245 ILDR1Q86SU0 546 aaPredicted RBP15.38■□□□□ 0.05
CAST-231ENST00000510245 CHRM1P11229 460 aaPredicted RBP15.36■□□□□ 0.05
CAST-231ENST00000510245 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
CAST-231ENST00000510245 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
CAST-231ENST00000510245 PKD2Q13563 968 aa15.32■□□□□ 0.04
CAST-231ENST00000510245 IFNL1Q8IU54 200 aa15.32■□□□□ 0.04
CAST-231ENST00000510245 PCDHB8Q9UN66 801 aa15.31■□□□□ 0.04
CAST-231ENST00000510245 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
CAST-231ENST00000510245 DCBLD2Q96PD2 775 aa15.3■□□□□ 0.04
CAST-231ENST00000510245 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
CAST-231ENST00000510245 ZNF467Q7Z7K2 595 aaPredicted RBP15.27■□□□□ 0.04
CAST-231ENST00000510245 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
CAST-231ENST00000510245 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
CAST-231ENST00000510245 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
CAST-231ENST00000510245 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
CAST-231ENST00000510245 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
CAST-231ENST00000510245 TIE1P35590 1138 aa15.16■□□□□ 0.02
CAST-231ENST00000510245 RNF25Q96BH1 459 aaPredicted RBP15.16■□□□□ 0.02
CAST-231ENST00000510245 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
CAST-231ENST00000510245 RGL2O15211 777 aa15.15■□□□□ 0.02
CAST-231ENST00000510245 TMEM106CQ9BVX2 250 aa15.14■□□□□ 0.01
CAST-231ENST00000510245 ATMINO43313 823 aaPredicted RBP15.13■□□□□ 0.01
CAST-231ENST00000510245 PSEN1P49768 467 aa15.13■□□□□ 0.01
CAST-231ENST00000510245 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
CAST-231ENST00000510245 PDAP1Q13442 181 aaKnown RBP15.12■□□□□ 0.01
CAST-231ENST00000510245 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
CAST-231ENST00000510245 ASTLQ6HA08 431 aaPredicted RBP15.11■□□□□ 0.01
CAST-231ENST00000510245 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
CAST-231ENST00000510245 ATN1P54259 1190 aaPredicted RBP15.1■□□□□ 0.01
CAST-231ENST00000510245 VGFO15240 615 aaPredicted RBP15.07■□□□□ 0
CAST-231ENST00000510245 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
CAST-231ENST00000510245 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
CAST-231ENST00000510245 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
CAST-231ENST00000510245 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
CAST-231ENST00000510245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
CAST-231ENST00000510245 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
CAST-231ENST00000510245 URB2Q14146 1524 aaKnown RBP15.02■□□□□ -0
CAST-231ENST00000510245 ZNF608Q9ULD9 1512 aaPredicted RBP15.01□□□□□ -0.01
CAST-231ENST00000510245 GOLGA2Q08379 1002 aa15□□□□□ -0.01
CAST-231ENST00000510245 CABP2Q9NPB3 220 aa14.97□□□□□ -0.01
CAST-231ENST00000510245 SLC39A7Q92504 469 aa14.96□□□□□ -0.01
CAST-231ENST00000510245 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
CAST-231ENST00000510245 STK25O00506 426 aa14.95□□□□□ -0.02
CAST-231ENST00000510245 BCL11BQ9C0K0 894 aaPredicted RBP14.93□□□□□ -0.02
CAST-231ENST00000510245 STK24Q9Y6E0 443 aa14.93□□□□□ -0.02
CAST-231ENST00000510245 C7P10643 843 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms