RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
DDX41-211ENST00000510171 IGF1RP08069 1367 aa18.33■□□□□ 0.53
DDX41-211ENST00000510171 ABCC10Q5T3U5 1492 aa18.29■□□□□ 0.52
DDX41-211ENST00000510171 KIF27Q86VH2 1401 aa18.29■□□□□ 0.52
DDX41-211ENST00000510171 KIAA0586Q9BVV6 1533 aa18.28■□□□□ 0.52
DDX41-211ENST00000510171 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
DDX41-211ENST00000510171 MAPKBP1O60336 1514 aa18.23■□□□□ 0.51
DDX41-211ENST00000510171 PTPRGP23470 1445 aa18.21■□□□□ 0.51
DDX41-211ENST00000510171 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
DDX41-211ENST00000510171 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
DDX41-211ENST00000510171 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
DDX41-211ENST00000510171 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
DDX41-211ENST00000510171 DIP2BQ9P265 1576 aa18.14■□□□□ 0.49
DDX41-211ENST00000510171 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
DDX41-211ENST00000510171 CARMIL2Q6F5E8 1435 aa18.14■□□□□ 0.49
DDX41-211ENST00000510171 CUL7Q14999 1698 aa18.13■□□□□ 0.49
DDX41-211ENST00000510171 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
DDX41-211ENST00000510171 ABCC2Q92887 1545 aa18.06■□□□□ 0.48
DDX41-211ENST00000510171 KDM6BO15054 1643 aa18.05■□□□□ 0.48
DDX41-211ENST00000510171 ASXL2Q76L83 1435 aa18.05■□□□□ 0.48
DDX41-211ENST00000510171 PLB1Q6P1J6 1458 aa18.04■□□□□ 0.48
DDX41-211ENST00000510171 UACAQ9BZF9 1416 aa18.03■□□□□ 0.48
DDX41-211ENST00000510171 UHRF1BP1LA0JNW5 1464 aa18.01■□□□□ 0.47
DDX41-211ENST00000510171 IQGAP2Q13576 1575 aa18■□□□□ 0.47
DDX41-211ENST00000510171 DISP1Q96F81 1524 aa17.98■□□□□ 0.47
DDX41-211ENST00000510171 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
DDX41-211ENST00000510171 TSPOAP1O95153 1857 aa17.96■□□□□ 0.47
DDX41-211ENST00000510171 GLI2P10070 1586 aa17.95■□□□□ 0.46
DDX41-211ENST00000510171 KDM5BQ9UGL1 1544 aa17.93■□□□□ 0.46
DDX41-211ENST00000510171 UGGT2Q9NYU1 1516 aa17.92■□□□□ 0.46
DDX41-211ENST00000510171 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
DDX41-211ENST00000510171 COL17A1Q9UMD9 1497 aaPredicted RBP17.88■□□□□ 0.45
DDX41-211ENST00000510171 TEX14Q8IWB6 1497 aa17.86■□□□□ 0.45
DDX41-211ENST00000510171 KCNH8Q96L42 1107 aa17.83■□□□□ 0.44
DDX41-211ENST00000510171 PPRC1Q5VV67 1664 aaKnown RBP17.83■□□□□ 0.44
DDX41-211ENST00000510171 KIAA0556O60303 1618 aa17.83■□□□□ 0.44
DDX41-211ENST00000510171 ADGRL1O94910 1474 aa17.82■□□□□ 0.44
DDX41-211ENST00000510171 WDR7Q9Y4E6 1490 aa17.81■□□□□ 0.44
DDX41-211ENST00000510171 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
DDX41-211ENST00000510171 ZCCHC11Q5TAX3 1644 aaKnown RBP17.8■□□□□ 0.44
DDX41-211ENST00000510171 FAM9AQ8IZU1 332 aaPredicted RBP17.79■□□□□ 0.44
DDX41-211ENST00000510171 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
DDX41-211ENST00000510171 CD109Q6YHK3 1445 aa17.78■□□□□ 0.44
DDX41-211ENST00000510171 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
DDX41-211ENST00000510171 PRXQ9BXM0 1461 aa17.73■□□□□ 0.43
DDX41-211ENST00000510171 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
DDX41-211ENST00000510171 P3H3Q8IVL6 736 aa17.72■□□□□ 0.43
DDX41-211ENST00000510171 ABCA8O94911 1581 aa17.7■□□□□ 0.42
DDX41-211ENST00000510171 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
DDX41-211ENST00000510171 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.41
DDX41-211ENST00000510171 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.41
DDX41-211ENST00000510171 ATP10BO94823 1461 aa17.63■□□□□ 0.41
DDX41-211ENST00000510171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.61■□□□□ 0.41
DDX41-211ENST00000510171 HNRNPUL2Q1KMD3 747 aaKnown RBP17.61■□□□□ 0.41
DDX41-211ENST00000510171 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
DDX41-211ENST00000510171 PHLDB1Q86UU1 1377 aa17.6■□□□□ 0.41
DDX41-211ENST00000510171 HECW2Q9P2P5 1572 aa17.59■□□□□ 0.41
DDX41-211ENST00000510171 ARAP3Q8WWN8 1544 aa17.59■□□□□ 0.41
DDX41-211ENST00000510171 RAPGEF3O95398 923 aa17.57■□□□□ 0.4
DDX41-211ENST00000510171 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
DDX41-211ENST00000510171 PLEKHD1A6NEE1 506 aa17.5■□□□□ 0.39
DDX41-211ENST00000510171 NEO1Q92859 1461 aa17.49■□□□□ 0.39
DDX41-211ENST00000510171 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
DDX41-211ENST00000510171 ABCA9Q8IUA7 1624 aa17.47■□□□□ 0.39
DDX41-211ENST00000510171 KIF21BO75037 1637 aa17.47■□□□□ 0.39
DDX41-211ENST00000510171 SAMD9Q5K651 1589 aa17.46■□□□□ 0.39
DDX41-211ENST00000510171 EEA1Q15075 1411 aa17.46■□□□□ 0.39
DDX41-211ENST00000510171 RAPGEF6Q8TEU7 1601 aa17.45■□□□□ 0.38
DDX41-211ENST00000510171 PTPRMP28827 1452 aa17.44■□□□□ 0.38
DDX41-211ENST00000510171 NUP153P49790 1475 aaKnown RBP17.44■□□□□ 0.38
DDX41-211ENST00000510171 FHOD3Q2V2M9 1422 aa17.44■□□□□ 0.38
DDX41-211ENST00000510171 DENND4BO75064 1496 aaPredicted RBP17.39■□□□□ 0.37
DDX41-211ENST00000510171 FBXO41Q8TF61 875 aa17.39■□□□□ 0.37
DDX41-211ENST00000510171 AKNAQ7Z591 1439 aa17.38■□□□□ 0.37
DDX41-211ENST00000510171 ADAMTSL3P82987 1691 aa17.36■□□□□ 0.37
DDX41-211ENST00000510171 FANCAO15360 1455 aa17.35■□□□□ 0.37
DDX41-211ENST00000510171 FRMPD1Q5SYB0 1578 aa17.34■□□□□ 0.37
DDX41-211ENST00000510171 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
DDX41-211ENST00000510171 POGZQ7Z3K3 1410 aa17.31■□□□□ 0.36
DDX41-211ENST00000510171 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
DDX41-211ENST00000510171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX41-211ENST00000510171 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
DDX41-211ENST00000510171 EFCAB5A4FU69 1503 aa17.3■□□□□ 0.36
DDX41-211ENST00000510171 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
DDX41-211ENST00000510171 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
DDX41-211ENST00000510171 MLECQ14165 292 aa17.28■□□□□ 0.36
DDX41-211ENST00000510171 ARHGEF40Q8TER5 1519 aa17.27■□□□□ 0.36
DDX41-211ENST00000510171 LMTK3Q96Q04 1460 aa17.27■□□□□ 0.36
DDX41-211ENST00000510171 EFCAB2Q5VUJ9 269 aa17.27■□□□□ 0.36
DDX41-211ENST00000510171 CDK11AQ9UQ88 783 aaPredicted RBP17.27■□□□□ 0.36
DDX41-211ENST00000510171 MADDQ8WXG6 1647 aa17.27■□□□□ 0.36
DDX41-211ENST00000510171 PLCH2O75038 1416 aa17.27■□□□□ 0.35
DDX41-211ENST00000510171 SCAPERQ9BY12 1400 aa17.27■□□□□ 0.35
DDX41-211ENST00000510171 PCF11O94913 1555 aaKnown RBP17.27■□□□□ 0.35
DDX41-211ENST00000510171 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
DDX41-211ENST00000510171 HSPA2P54652 639 aa17.26■□□□□ 0.35
DDX41-211ENST00000510171 YEATS2Q9ULM3 1422 aa17.26■□□□□ 0.35
DDX41-211ENST00000510171 CFAP74Q9C0B2 1584 aa17.24■□□□□ 0.35
DDX41-211ENST00000510171 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
DDX41-211ENST00000510171 ZFYVE16Q7Z3T8 1539 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms