RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
HMGCR-208ENST00000509431 FHAD1B1AJZ9 1412 aa25.45■■□□□ 1.66
HMGCR-208ENST00000509431 TSPOAP1O95153 1857 aa25.39■■□□□ 1.66
HMGCR-208ENST00000509431 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
HMGCR-208ENST00000509431 HECW2Q9P2P5 1572 aa25.35■■□□□ 1.65
HMGCR-208ENST00000509431 ADGRL1O94910 1474 aa25.34■■□□□ 1.65
HMGCR-208ENST00000509431 ADCY10Q96PN6 1610 aa25.33■■□□□ 1.65
HMGCR-208ENST00000509431 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
HMGCR-208ENST00000509431 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
HMGCR-208ENST00000509431 FBXO41Q8TF61 875 aa25.23■■□□□ 1.63
HMGCR-208ENST00000509431 RUSC2Q8N2Y8 1516 aa25.2■■□□□ 1.62
HMGCR-208ENST00000509431 PPRC1Q5VV67 1664 aaKnown RBP25.1■■□□□ 1.61
HMGCR-208ENST00000509431 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.61
HMGCR-208ENST00000509431 GLI2P10070 1586 aa25.08■■□□□ 1.61
HMGCR-208ENST00000509431 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
HMGCR-208ENST00000509431 PLB1Q6P1J6 1458 aa25.02■■□□□ 1.6
HMGCR-208ENST00000509431 KIAA0586Q9BVV6 1533 aa24.99■■□□□ 1.59
HMGCR-208ENST00000509431 ABCC2Q92887 1545 aa24.97■■□□□ 1.59
HMGCR-208ENST00000509431 COL17A1Q9UMD9 1497 aaPredicted RBP24.97■■□□□ 1.59
HMGCR-208ENST00000509431 ASXL2Q76L83 1435 aa24.97■■□□□ 1.59
HMGCR-208ENST00000509431 PTPRGP23470 1445 aa24.95■■□□□ 1.58
HMGCR-208ENST00000509431 TEX14Q8IWB6 1497 aa24.94■■□□□ 1.58
HMGCR-208ENST00000509431 MAP3K4Q9Y6R4 1608 aa24.88■■□□□ 1.57
HMGCR-208ENST00000509431 LMTK3Q96Q04 1460 aa24.86■■□□□ 1.57
HMGCR-208ENST00000509431 CUL7Q14999 1698 aa24.84■■□□□ 1.57
HMGCR-208ENST00000509431 UHRF1BP1LA0JNW5 1464 aa24.83■■□□□ 1.57
HMGCR-208ENST00000509431 TNIKQ9UKE5 1360 aa24.82■■□□□ 1.56
HMGCR-208ENST00000509431 EPRSP07814 1512 aaKnown RBP24.82■■□□□ 1.56
HMGCR-208ENST00000509431 CARMIL2Q6F5E8 1435 aa24.8■■□□□ 1.56
HMGCR-208ENST00000509431 TTBK1Q5TCY1 1321 aaPredicted RBP24.74■■□□□ 1.55
HMGCR-208ENST00000509431 UACAQ9BZF9 1416 aa24.73■■□□□ 1.55
HMGCR-208ENST00000509431 KDM5BQ9UGL1 1544 aa24.71■■□□□ 1.55
HMGCR-208ENST00000509431 IGF1RP08069 1367 aa24.66■■□□□ 1.54
HMGCR-208ENST00000509431 SOCS7O14512 581 aa24.64■■□□□ 1.54
HMGCR-208ENST00000509431 KIF21BO75037 1637 aa24.62■■□□□ 1.53
HMGCR-208ENST00000509431 ZCCHC11Q5TAX3 1644 aaKnown RBP24.62■■□□□ 1.53
HMGCR-208ENST00000509431 MAGI3Q5TCQ9 1506 aa24.6■■□□□ 1.53
HMGCR-208ENST00000509431 IQGAP2Q13576 1575 aa24.58■■□□□ 1.52
HMGCR-208ENST00000509431 PTPRMP28827 1452 aa24.58■■□□□ 1.52
HMGCR-208ENST00000509431 WDR7Q9Y4E6 1490 aa24.57■■□□□ 1.52
HMGCR-208ENST00000509431 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
HMGCR-208ENST00000509431 CFAP43Q8NDM7 1665 aa24.55■■□□□ 1.52
HMGCR-208ENST00000509431 PCF11O94913 1555 aaKnown RBP24.54■■□□□ 1.52
HMGCR-208ENST00000509431 CD109Q6YHK3 1445 aa24.53■■□□□ 1.52
HMGCR-208ENST00000509431 ADAMTSL3P82987 1691 aa24.53■■□□□ 1.52
HMGCR-208ENST00000509431 DISP1Q96F81 1524 aa24.51■■□□□ 1.51
HMGCR-208ENST00000509431 ILDR2Q71H61 639 aa24.5■■□□□ 1.51
HMGCR-208ENST00000509431 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
HMGCR-208ENST00000509431 DISP3Q9P2K9 1392 aa24.49■■□□□ 1.51
HMGCR-208ENST00000509431 ARAP3Q8WWN8 1544 aa24.44■■□□□ 1.5
HMGCR-208ENST00000509431 CERKQ8TCT0 537 aa24.42■■□□□ 1.5
HMGCR-208ENST00000509431 UGGT2Q9NYU1 1516 aa24.4■■□□□ 1.5
HMGCR-208ENST00000509431 KIAA0556O60303 1618 aa24.36■■□□□ 1.49
HMGCR-208ENST00000509431 BCORL1Q5H9F3 1711 aa24.36■■□□□ 1.49
HMGCR-208ENST00000509431 KCNH8Q96L42 1107 aa24.34■■□□□ 1.49
HMGCR-208ENST00000509431 PHLDB1Q86UU1 1377 aa24.33■■□□□ 1.49
HMGCR-208ENST00000509431 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
HMGCR-208ENST00000509431 MADDQ8WXG6 1647 aa24.32■■□□□ 1.48
HMGCR-208ENST00000509431 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
HMGCR-208ENST00000509431 HSPA2P54652 639 aa24.24■■□□□ 1.47
HMGCR-208ENST00000509431 ARID4BQ4LE39 1312 aaPredicted RBP24.24■■□□□ 1.47
HMGCR-208ENST00000509431 RIMS1Q86UR5 1692 aaKnown RBP24.22■■□□□ 1.47
HMGCR-208ENST00000509431 ABCA8O94911 1581 aa24.21■■□□□ 1.47
HMGCR-208ENST00000509431 RAPGEF3O95398 923 aa24.16■■□□□ 1.46
HMGCR-208ENST00000509431 NEO1Q92859 1461 aa24.15■■□□□ 1.46
HMGCR-208ENST00000509431 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
HMGCR-208ENST00000509431 ABCA9Q8IUA7 1624 aa24.13■■□□□ 1.45
HMGCR-208ENST00000509431 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
HMGCR-208ENST00000509431 FRMPD1Q5SYB0 1578 aa24.1■■□□□ 1.45
HMGCR-208ENST00000509431 ARHGEF40Q8TER5 1519 aa24.1■■□□□ 1.45
HMGCR-208ENST00000509431 POGZQ7Z3K3 1410 aa24.08■■□□□ 1.44
HMGCR-208ENST00000509431 DMRT2Q9Y5R5 561 aa24.04■■□□□ 1.44
HMGCR-208ENST00000509431 FANCAO15360 1455 aa24.03■■□□□ 1.44
HMGCR-208ENST00000509431 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
HMGCR-208ENST00000509431 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
HMGCR-208ENST00000509431 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
HMGCR-208ENST00000509431 YEATS2Q9ULM3 1422 aa24■■□□□ 1.43
HMGCR-208ENST00000509431 ATP10BO94823 1461 aa23.99■■□□□ 1.43
HMGCR-208ENST00000509431 TTC37Q6PGP7 1564 aa23.96■■□□□ 1.43
HMGCR-208ENST00000509431 AKNAQ7Z591 1439 aa23.96■■□□□ 1.43
HMGCR-208ENST00000509431 PREX1Q8TCU6 1659 aa23.95■■□□□ 1.43
HMGCR-208ENST00000509431 RICTORQ6R327 1708 aa23.95■■□□□ 1.42
HMGCR-208ENST00000509431 DENND4BO75064 1496 aaPredicted RBP23.94■■□□□ 1.42
HMGCR-208ENST00000509431 FER1L4A9Z1Z3 1794 aa23.94■■□□□ 1.42
HMGCR-208ENST00000509431 FHOD3Q2V2M9 1422 aa23.93■■□□□ 1.42
HMGCR-208ENST00000509431 STRCQ7RTU9 1775 aa23.91■■□□□ 1.42
HMGCR-208ENST00000509431 EFCAB5A4FU69 1503 aa23.89■■□□□ 1.41
HMGCR-208ENST00000509431 IQSEC2Q5JU85 1478 aa23.88■■□□□ 1.41
HMGCR-208ENST00000509431 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
HMGCR-208ENST00000509431 ZMYM4Q5VZL5 1548 aa23.88■■□□□ 1.41
HMGCR-208ENST00000509431 ZFYVE16Q7Z3T8 1539 aa23.86■■□□□ 1.41
HMGCR-208ENST00000509431 CFAP74Q9C0B2 1584 aa23.86■■□□□ 1.41
HMGCR-208ENST00000509431 MAGI2Q86UL8 1455 aa23.85■■□□□ 1.41
HMGCR-208ENST00000509431 SIGLEC1Q9BZZ2 1709 aa23.84■■□□□ 1.41
HMGCR-208ENST00000509431 PTPRTO14522 1441 aa23.84■■□□□ 1.41
HMGCR-208ENST00000509431 SETD1BQ9UPS6 1966 aaKnown RBP23.82■■□□□ 1.4
HMGCR-208ENST00000509431 MLECQ14165 292 aa23.81■■□□□ 1.4
HMGCR-208ENST00000509431 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
HMGCR-208ENST00000509431 UHRF1BP1Q6BDS2 1440 aa23.79■■□□□ 1.4
HMGCR-208ENST00000509431 LTBP4Q8N2S1 1624 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms